Bacillus infantis: N288_18765
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Entry
N288_18765 CDS
T02860
Name
(GenBank) hypothetical protein
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bif
Bacillus infantis
Pathway
bif03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
N288_18765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bif03400
]
N288_18765
Enzymes [BR:
bif01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
N288_18765
DNA repair and recombination proteins [BR:
bif03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
N288_18765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
UvrD-helicase
AAA_12
AAA_22
nSTAND3
AAA_16
AAA_28
T2SSE
NTPase_1
AAA
NPHP3_N
HHH_5
TsaE
AAA_17
DUF4926
Motif
Other DBs
NCBI-ProteinID:
AGX05631
UniProt:
U5LG21
LinkDB
All DBs
Position
complement(3422920..3425340)
Genome browser
AA seq
806 aa
AA seq
DB search
MEKQDSLDLFAEQGKFIKGKHLVTIFHNESNLYTVLRIRVEETNHEYDDKEAVITGYFPK
VHDHESYIFYGEFKEHPKFGLQFLANHFRKDIPQTKQGVVGYLSGELFKGIGKKTAESIV
DKLGENAISRILNQPSLLDEIPKLPSEKAKLLYDTLMEHQGLEQAMIALNQYGFGPQLSM
KIYQMYKDETVQLLQTNPYKLVEDIEGIGFGRADELGYQLGISGSHPDRIKAACLYILET
ESMQNGNVYVHARTLLEKARSLLEENKRDQIEYSSISQEVIKLEEEGKIMAEDKRIYLPS
LYFAEKGLVTSIKRLLQQTEYDEQFPESEFLLALGSLEERIGVQYAPSQKEAIQTALMSP
MLILTGGPGTGKTTVIKGIVELYAELHGCSLEPKDYKKEEPFPFLLAAPTGRAAKRMSES
TGLPAVTIHRLLGWNGTEGFDHHEDNPLEGKILIVDETSMVDIWLANKLFKALPENIQVI
LVGDEDQLPSVGPGQVLKDLLLSEKVPTVRLTDIYRQAEGSSIIELAHEIKKGGLPDDIA
VQQADRSFLKCSPAQIADVVEKVVLNARKKGYRSRDIQVLAPMYRGPAGIDNLNKILQEI
LNPNPDGTRKELSFGDVKYRVGDKVLQLVNQPENNVFNGDMGEIVSVFYAKENTEKQDMI
VVSFDGNEATYTRQDLSQITLAYCCSVHKSQGSEFPIVIMPIVRSYYRMLRRNLIYTAIT
RSRQFLILCGEESALRSGVQRAEEQARLTSLTKRLQDALGEAPEQTGQEEAGEEAEEVPY
EVKLMNADPMIGMGSITPYDFLEEKA
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcaggattctctggatctttttgccgaacagggcaaattcatcaaagggaag
catcttgtgactatttttcataatgaatcaaatctatatacagtgctccggatccgggtg
gaagagacgaatcatgaatatgacgacaaggaagctgtcatcacaggctatttcccgaag
gtgcatgaccatgaatcgtatattttctatggggaattcaaggagcacccgaaattcggc
cttcaattcctggcgaatcatttccgaaaggatatcccccagaccaagcagggcgtagta
ggctatctttccggcgagctttttaaaggcatcgggaaaaagacggcagaatctatcgta
gataaacttggggagaatgcgatttccagaatcctcaaccagccctccctcctggacgag
atcccgaaactaccttctgaaaaagcaaagctcctttacgacacacttatggagcatcag
ggtctggaacaggcaatgattgcactgaatcaatatggcttcggcccccagctgagcatg
aagatttatcagatgtacaaggatgagacggtccagcttctgcagaccaatccatacaag
ctggttgaggatattgaaggcatcggcttcggcagggcggatgagcttggctaccagctt
ggcatttcaggaagccatcctgaccgcatcaaggcggcatgcctgtatatcctggaaaca
gaaagcatgcagaacggaaatgtttatgtgcatgcccgcaccctcctggaaaaagccagg
tcgcttcttgaggaaaataaaagagatcagatagaatacagctccatctcccaggaagtt
atcaagctcgaagaagaaggcaagatcatggcagaagataaacggatttatctgccctca
ctttattttgctgaaaaggggcttgtaacgagcatcaagcggctgctgcagcagaccgag
tatgatgaacaattccctgagtcggagttcctgcttgcccttggcagccttgaggaaagg
ataggtgtgcagtacgccccttcgcaaaaagaagcaatccagaccgctctgatgagtccc
atgcttatcctgacggggggaccgggaacgggaaagacaacagtcatcaaaggtatagtc
gaactgtacgctgagctgcatggctgctcactggaaccgaaggattataaaaaggaagag
cctttcccgttcctcctggccgccccgacaggaagggccgccaagcggatgtccgaatcg
accggccttcctgctgtaacgatccacaggctgctcggctggaatggaacggaaggcttt
gaccaccatgaagacaatccgctggaagggaaaatcctgatagtcgatgaaacctccatg
gtagacatctggctggcgaacaagctgttcaaggctttgccggaaaacatccaggtcatc
ctggtaggagatgaagaccagttgccttcagtcggacccggccaggtgctgaaggatctg
cttctttcagaaaaagtgcccactgtcaggctgacagatatttaccggcaggcagaaggc
tcatccatcattgagctggcgcacgaaatcaaaaaaggcggtcttcctgatgatatcgcg
gtccagcaggccgacagatcattccttaagtgcagccctgcccagattgccgatgtggtt
gaaaaggtagtcctgaatgccaggaaaaaaggctacaggtccagggatattcaggttctc
gctcccatgtacagggggccggcaggaattgataatctgaataagatccttcaggaaatt
ttaaaccccaatcctgatggcaccaggaaggagctatctttcggtgatgtgaaatacagg
gtgggcgataaggtcctacagctggtcaaccagccggaaaataacgtatttaacggcgat
atgggcgaaattgtatctgtcttctatgcaaaggaaaataccgaaaagcaggatatgatc
gttgtttcttttgatggtaacgaagcaacctatacaaggcaggacctcagccagattacg
cttgcctactgctgctctgtccataaatcacagggaagtgagtttccgattgtcattatg
ccgatcgtccggagctattaccgcatgctcagaaggaacctgatttatacagccattacg
agaagcagacagtttctcatcctttgcggtgaagaatcagcgctgagatccggggtgcag
agggcggaagagcaggcaaggctgacttccctgacaaaacggcttcaggatgcacttggg
gaagctccagagcagacaggccaggaagaagcaggcgaagaagccgaagaggttccatac
gaagtaaagctcatgaatgcagatcccatgataggcatgggatccatcactccttatgac
tttttggaagagaaagcataa
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integrated database retrieval system
