Bacillus infantis: N288_19565
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Entry
N288_19565 CDS
T02860
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bif
Bacillus infantis
Pathway
bif03030
DNA replication
bif03410
Base excision repair
bif03420
Nucleotide excision repair
bif03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
N288_19565
03410 Base excision repair
N288_19565
03420 Nucleotide excision repair
N288_19565
03440 Homologous recombination
N288_19565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bif03032
]
N288_19565
03400 DNA repair and recombination proteins [BR:
bif03400
]
N288_19565
Enzymes [BR:
bif01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
N288_19565
DNA replication proteins [BR:
bif03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
N288_19565
DNA repair and recombination proteins [BR:
bif03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
N288_19565
NER (nucleotide excision repair)
GGR (global genome repair) factors
N288_19565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
DNA_polI_exo1
5_3_exonuc_N
5_3_exonuc
HHH_2
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
AGX05789
UniProt:
U5LD81
LinkDB
All DBs
Position
complement(3592662..3595295)
Genome browser
AA seq
877 aa
AA seq
DB search
MAKKLVLIDGNSIAYRAFFALPLLNNDKGIHTNAVYGFTMMLMRILEDEDPSHILVAFDA
GKTTFRHKTFTEYKGGRQKTPPELSEQFPFIRDLLDAYQIPRYELENYEADDIIGTLSLQ
AEQEGFEVKVISGDKDLTQLSSEHTTVGITRKGITDIEEYTPEHIREKYGLSPGQIIDMK
GLMGDSSDNIPGVPGVGEKTAIKLLKEFETLENLLGSIDRVSGQKLKEKLEEHKDLAVMS
KELATITREAPVEVKVEDVGYSGYDQAKVVSLFKDLGFNSLLEKIGGELPEETAAPLEDI
QFETAENILDDLFADETAFYVEMLEENYHTAEIAGFSAASGNGVYFIPAELALSSETFKK
WAEDESKKKIVYDAKRTEVSLRHHGIHLKGVEFDLLIASYIINPSESIEDFASVAKRHGY
NGVQTDDAVYGKGAKRKIPAQEELAGHLARKAAALEALRDKLEDELKENRQYELFYDLEM
PLSLILADMESQGVKVDLERLQAMGEQINQKLGDIEERIHELAGEAFNINSPKQLGVILF
EKLGLPPVKKTKTGYSTSADVLEKLEDKHEIIREILQYRQLGKLQSTYIEGLLKVTDKKT
GKVHTRFNQALTQTGRLSSTDPNLQNIPIRLEEGRKIRQAFVPSEKGWVIFAADYSQIEL
RVLAHIAGDEKLIEAFREDQDVHTKTAMEVFHVSEGEVTSNMRRHAKAVNFGIVYGISDY
GLSQSLGITRKEAGQFIDRYLESYPGVREYMDDIIQEAKQKGYVSTLLHRRRYLPEITSR
NFNLRSFAERTAMNTPIQGSAADVIKKAMIDMADRLREEGLQSRLLLSVHDELIFEAPEE
EIEILKRIVPDVMENTVDLDVPLKVDFSYGPTWFDAK
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaaagcttgtattgattgatggaaacagtattgcatacagggcctttttcgcg
cttccgctgctgaataatgacaaaggcatacatacaaatgcggtttacggttttacgatg
atgctcatgcgcatcctggaggatgaggatccttctcatattctggttgcttttgatgca
ggaaaaacaacattccgccataaaacattcactgaatataagggaggcaggcaaaaaact
ccgccggagctgtctgaacaattccccttcatccgtgatctgcttgatgcttatcagatt
ccgcgctatgagcttgaaaattatgaggcggatgatatcatcggcacactttccctccag
gcagagcaggagggcttcgaggtaaaagtcatttccggggataaggatttgacccagtta
agctctgaacatactaccgtcggaatcacccgcaagggaataacggatatagaagaatat
actccggaacatatccgggaaaaatatggcctgtcgcctggccagatcattgatatgaaa
ggcctgatgggggacagctcagacaatatcccaggggtgcccggtgtaggagagaaaaca
gccatcaagctgctgaaggaatttgaaacgcttgaaaacctgcttggatccatcgatcgt
gtgagcggccagaagctgaaggaaaagcttgaggagcacaaagatctggcagtgatgagc
aaggagcttgccaccatcacaagggaagcgcctgttgaagtgaaggtagaagatgtgggc
tattcaggctacgaccaggccaaagtcgtttcccttttcaaagatctcggattcaactcg
cttcttgaaaagattggcggggaattaccagaagaaactgctgcgccccttgaagatatc
cagtttgaaacagcagaaaacatcctggacgatttatttgcagacgaaactgctttttat
gtcgagatgcttgaagagaattatcataccgccgaaatagccggcttctcggctgcaagc
ggaaatggggtctattttattcccgctgagcttgcactaagctctgagacctttaagaaa
tgggccgaggacgaatctaaaaagaagattgtctatgatgccaagcgaacggaggtttcc
ctgcgccatcacggcatccacttaaaaggagtggagtttgaccttcttatcgcttcctat
atcatcaatccgtcagaatcaatcgaagactttgcttctgttgccaaacgccatgggtat
aatggtgtacagacggatgatgctgtctacgggaaaggtgcgaaaagaaagattccggca
caggaagagctggcagggcatcttgccagaaaagctgcagccctggaagcccttagggac
aagcttgaagatgagttaaaggaaaacaggcagtatgagcttttttatgatctggaaatg
ccgctttcgcttattttggctgatatggagtcgcagggcgtcaaagtcgaccttgaaagg
cttcaggcgatgggagaacagatcaatcagaagctgggcgatattgaagagcgcatccac
gagctcgcgggtgaggctttcaacattaattctcctaaacagcttggggtcatcctcttt
gaaaagctcggcctgcctcctgtcaaaaagacaaagacaggatattctacttctgctgat
gttctggaaaagctggaagataagcatgagatcatcagggaaatcctgcagtacaggcag
ctcggcaaactgcagtcgacttatattgaagggctgctgaaggtgacggacaagaaaaca
gggaaggttcatacccgctttaatcaggcactcacacaaacggggcgcctcagctctacg
gatccgaacctgcagaatatcccgatccggctggaagagggcagaaagatcaggcaggca
tttgtaccttctgaaaaaggctgggtcatttttgcagccgactattcccagatcgagcta
agggtgcttgcgcatattgctggcgatgaaaagctgatcgaggctttccgtgaagatcag
gatgtccatacaaagacagctatggaggtattccatgtttcagaaggcgaagtgacttcg
aacatgaggcgccacgcgaaagcagtcaactttggaattgtatatggaataagcgattat
ggattgtcgcaaagcctggggattacgaggaaggaagccgggcagttcatcgaccgctat
ctggaaagctatcccggagtccgcgagtatatggacgatatcatccaggaggcgaaacag
aagggatatgtttcgacacttcttcacagaagaagatatcttcccgagattacgagcagg
aatttcaatctaaggagctttgcagagcggacagccatgaatacgcccattcagggcagt
gctgccgatgttattaagaaagccatgattgacatggccgatcggcttcgggaagaagga
ctgcagtcccgccttcttttatcggtgcacgatgaattgatctttgaggcgcctgaggaa
gaaattgagatactaaagagaattgtgcccgacgtgatggaaaatacagtagatctggat
gtcccgctaaaggtcgacttctcatacggcccgacatggtttgatgcaaaatag
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