Bacillus infantis: N288_19665
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Entry
N288_19665 CDS
T02860
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bif
Bacillus infantis
Pathway
bif03030
DNA replication
bif03430
Mismatch repair
bif03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
N288_19665 (dnaE)
03430 Mismatch repair
N288_19665 (dnaE)
03440 Homologous recombination
N288_19665 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bif03032
]
N288_19665 (dnaE)
03400 DNA repair and recombination proteins [BR:
bif03400
]
N288_19665 (dnaE)
Enzymes [BR:
bif01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
N288_19665 (dnaE)
DNA replication proteins [BR:
bif03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
N288_19665 (dnaE)
DNA repair and recombination proteins [BR:
bif03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
N288_19665 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
tRNA_anti_2
Mitofissin
Motif
Other DBs
NCBI-ProteinID:
AGX05809
UniProt:
U5LD96
LinkDB
All DBs
Position
complement(3614917..3618276)
Genome browser
AA seq
1119 aa
AA seq
DB search
MSFIHLHVYSAYSLLTSTVSVEQLVARAKQKGFSAIALTDRNVMYGTVQFYKECLKHSIK
PIIGLCADIESAGGEKGPSPLVLLAQNQDGFQNLLKISSTLQTKADGGIPVKWLKHYSSG
LIALTPGLEGEIEQYIAGGEEEKALEAIRLYTEIFGKDRFYLAYQDHGLPEEKKINRKLK
ELSVNHGFQTAAANQVFYAEKEDAFAQECLLAIKNGDKLQDENRFRLQSDEYYLKTAEEM
SEVFTESTEALENTIKIMEQCNVMLELDKKHLPKYPVPEGDADTLLEELCWKGFAERYPE
ASEVHRQRLLYELGIIKKMKFSDYFLIVWDFIKFSRENGILTGPGRGSAAGSMVSYVLYI
TDADPIEHELLFERFLNPERISMPDIDIDFPDHRRDEVIRYVAKKYGELHVAQIITFGTL
AAKAAMRDTGRVFGLNAKELEQVSRLIPSRPGTNLKTAYKESEQLRAFTAESSLNKRLFE
TALKIEGLPRHTSTHAAGVVISEFPLVNVVPIQQGHEGVYLTQYSMEHLEAAGLLKMDFL
GLRNLSLIETILSSIQRKTGKKPDIKKIPLDDEKTYRLLSSGETTGVFQLESDGMRNVLK
KLKPTRFEDIVAVNALYRPGPMENIPSFINRKHGKEPISYPHPDLKPYLEKTYGVIVYQE
QIMQIASKMAGFSLGEADLLRRAVSKKQKDVLDRERAHFASGAVSSGYDEKTAQEVYDLI
VRFANYGFNRSHAVAYSFIAYQLAYLKANYPLNFMAALLSQASGNEDKLAQYIRELKHLG
LTLLPPSINSSGYSFQAESGGIRYSLAAVKGIGASVLKDVFHARRQKRFEDLFDFCIRVP
AKSATRKILEAFVHSGSFDEFGEDRAVLLATLDIAIEHAELVKPDESGQEDFFSEDEFSI
KPKYAENDPIRIEDKLQYEKEYLGLYLSDHPVSVYAASFASLGVTQLADMEPGSRNIRTA
AYLSEVKKIRTKKGEAMAFLSLNDQSGEMEAVVFPAVYKRDSALLKQGAILLLEGKAEER
DGKRQFIVNRAADMGQAAAEAGKHERTLYLKVPEDIETPEGLKELKAILGRNPGSVPVVL
HYAGSQKTIRLAEGNGADATEKLLKDLGSVLGTENVIIK
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttattcaccttcatgtatatagtgcatacagcctgctgacaagtacggtttcg
gttgaacagcttgttgcgcgggcaaagcagaaaggcttcagcgccattgccttgacagac
cggaatgtaatgtatggtacggttcagttttacaaggaatgtctcaagcattctattaaa
ccgatcatcggcctttgtgcagatattgaatccgcgggaggggaaaaggggccgagccct
ttagtgctcctggcccaaaaccaggacggcttccagaacctcctgaaaatatcgagcact
cttcaaacgaaagcggacggggggatcccggtaaaatggctgaagcattattcctcaggg
cttattgcccttacaccgggcctggaaggagaaatcgaacagtatattgccggcggtgaa
gaagagaaggcgcttgaagccattcgcctctatacagagattttcggaaaagaccggttt
tatctggcctatcaggatcatggccttccggaagaaaagaagataaacagaaagctgaag
gaattgtctgtaaaccatggctttcagaccgctgcggcaaaccaggtgttttatgccgaa
aaagaagatgcttttgcccaggaatgccttctggccattaaaaatggcgataaactccag
gacgaaaaccgcttccgtcttcaaagcgatgaatattatcttaagacagcagaagaaatg
tcagaggtttttacagaaagcactgaagcactggagaacaccattaaaattatggagcag
tgcaatgtcatgctggagcttgataagaagcatctgccaaaataccctgtcccggagggg
gatgcggatacactgctggaagagctgtgctggaagggatttgcggagcgctatcccgag
gcttcggaagtccatcgccaacgccttctatatgagttaggcatcattaaaaaaatgaag
ttcagcgattattttctgattgtctgggatttcatcaaattctccagagaaaacggcatc
ctaactggccccggccggggatctgcggccggatccatggtgtcttacgtcctttatata
accgatgctgacccaattgagcatgagctcctgtttgagcgctttcttaatccggagcgg
atatccatgccagatattgatatagactttccggaccatagaagggatgaggtcatcaga
tacgtcgcaaaaaaatacggagagctccatgtggcccagattatcactttcggcacgctg
gcagccaaagcggcaatgcgggataccggaagggtattcggcctgaatgcaaaagagctt
gagcaggtttctcgcctgatcccgtcccgaccaggcacaaacctgaaaacagcctacaaa
gaatcagaacagctgcgggcgtttacggctgaatccagcctgaataagaggttatttgaa
acagcgctgaaaatcgaagggcttccaaggcatacatccacacacgctgcaggtgtggtt
atcagcgaatttccccttgttaatgtggttccaatccagcagggccatgaaggagtctat
ttgacgcaatactcaatggagcatctggaggctgccggccttttaaaaatggacttcctg
gggctgcgcaatctttcccttattgaaacgattttatcctccattcagcggaaaacagga
aagaaacctgatataaaaaagatccccctggatgatgaaaagacataccggcttcttagc
tccggggagacgacaggtgtcttccagcttgaatctgatgggatgcggaatgtactcaag
aagctgaagccgacccgctttgaagatattgtggcggtcaatgcactatacaggccggga
ccgatggagaatatcccatccttcattaacaggaagcatgggaaagagccgatttcttac
ccgcatccggatttgaagccgtatttagaaaaaacttacggagtcattgtctaccaggag
caaatcatgcagattgcttccaagatggccggcttctctttgggagaagcagatttgctg
agaagggctgtgagtaaaaagcagaaggatgtgctggaccgggagagggcccattttgca
tcaggtgctgtgagcagcggctatgacgagaaaacagctcaggaagtttacgacctgatt
gtgcgctttgcaaattacggctttaacagaagccacgctgtcgcctacagctttatcgct
taccagcttgcctatttaaaagctaattatcctttgaactttatggctgcactcctttca
caggcttcaggcaatgaagataagcttgcccagtatatccgtgagctgaagcatctgggg
ctcacgcttcttccgccatcaatcaattcgagcggctattccttccaggcagaaagcggc
ggcatccgctacagccttgcagcagtgaaagggataggcgcctctgtcctgaaggatgtc
tttcacgcccgaaggcagaagcgttttgaggatttgtttgatttttgcatcagggtacct
gcaaaatcagccacacgaaaaattctggaggcatttgtgcattccggcagcttcgacgaa
ttcggggaggaccgcgctgttttgcttgccactctggatatagcgattgagcatgcagaa
ctggttaagccggatgagtccggccaggaggatttcttctctgaagatgaattttccatc
aagccgaagtacgcggaaaatgaccccatccgcattgaagataagcttcagtatgaaaaa
gagtatctcggactttatctgtcagaccatcctgtttccgtttatgctgccagttttgcc
tccctcggtgtcacacagctggcagatatggaacctggcagccggaatataagaactgcc
gcttatctttcagaagtaaaaaaaatcaggacgaagaagggagaggccatggctttcctg
tccctgaatgaccagagcggagaaatggaggcagttgtattccctgcggtatataaaagg
gattctgcacttctgaagcagggagctatccttctcttggaaggcaaagccgaggagcgg
gatggaaagaggcagtttattgtgaaccgtgccgcagatatgggacaggcagctgcagaa
gcaggcaagcatgagaggaccttatatttgaaggtccctgaagatatagaaacacctgaa
ggcctgaaggagctcaaagctatcctggggaggaatcctggatcagttccggtcgtcctt
cattatgcaggatctcaaaagacgatccgcctggcagaaggaaacggagcagatgccaca
gaaaagctgctcaaagatctgggcagcgtgctaggcactgaaaatgtaattataaaatag
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