Candidatus Bipolaricaulis sibiricus: BIP78_0151
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Entry
BIP78_0151 CDS
T05809
Name
(GenBank) Nickel-dependent hydrogenase, large subunit
KO
K14126
F420-non-reducing hydrogenase large subunit [EC:1.12.99.-
1.8.98.5
]
Organism
bih
Candidatus Bipolaricaulis sibiricus
Pathway
bih00680
Methane metabolism
bih01100
Metabolic pathways
bih01120
Microbial metabolism in diverse environments
bih01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
bih00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
BIP78_0151
Enzymes [BR:
bih01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.98 With other, known, physiological acceptors
1.8.98.5 H2:CoB-CoM heterodisulfide,ferredoxin reductase
BIP78_0151
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Gene cluster
GFIT
Motif
Pfam:
NiFeSe_Hases
Motif
Other DBs
NCBI-ProteinID:
QAA75919
UniProt:
A0A410FRR9
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All DBs
Position
complement(142178..143629)
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AA seq
483 aa
AA seq
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MKKIVIDPITRLEGHGKILLYLDEGGGLKGAALQVPELRGFEAFCRGRRGEEMPQITERI
CGVCPEAHHLASARALDAAYGAEVPPTAWIQRELFYNCYIFADHLLHLVFLGGPDLLLPA
DTPKASRNVLGVLQAYPELGREIVTVRARAQRVLEIIGGRAIHPVFALPGGVARPLTADE
GKEIAGHTEAMVALAKAFVTFFHEEVLPDPGYQGLLSSPHAQLPTHYMGLVDGNTAPHFC
RGEVRAVSSDGTELFRLDGAGALAKIAERVEPWTYVKFPYLKELGWTGFAAGPASGVYRV
GPLARLNVAERMATPLAQEEYERFLDFFGEKPVHATFAYHWARLVEMVQAAEAAAALAAE
KGLTGTEVRGKLGTPGEGVGVVEAARGTLFHRYVLDAQGLVQDLDLIVATTHNAAGIGLS
VKQMAEDVVRAGTLDEVLLNRIEMAFRAYDPCLACATHFLPGEMPLVVEIYDTEGNLDRR
ISR
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagatcgtgatcgatcccatcacgcggctcgaggggcacgggaagatcctcctc
tacctcgacgaggggggcgggctcaagggcgccgccctccaggtccccgagctgcggggg
ttcgaggcgttctgccgcggccgacggggagaggagatgccccagatcacggagcggatc
tgcggggtgtgcccggaggcccatcacctcgcgtcagcgcgggccctcgacgcggcgtac
ggggccgaggtcccgccgaccgcgtggatccagcgcgagctcttctacaactgctacatc
ttcgctgaccacctgctgcacctcgtgttcctcggcgggccggacctgttgctcccggcg
gacacgccgaaggcgagccggaacgtcctgggcgtcctccaggcctacccggagctcggc
cgggagatcgtgacggtgcgggcgcgcgcgcagcgggtgctcgagatcatcggcggccgg
gcgatccaccccgtgttcgccctccccggcggcgtggcccgacccctcaccgcggacgag
gggaaggagatcgccggccacaccgaggcgatggtcgcgctcgccaaggcgttcgtgacc
ttcttccacgaggaggtcctccccgacccggggtaccaggggctcctctcctcgccccac
gcccagcttcccacgcactacatggggctcgtggacgggaacaccgcgccccacttctgc
cgcggcgaggtgcgggccgtgtcttccgatggaacggagctgttccgtctcgatggggcg
ggagcgctggcgaagatcgccgagcgggtcgaaccgtggacctacgtgaagttcccgtac
ctgaaggagctcgggtggaccgggttcgcggccgggccggcgtccggggtgtaccgggtg
gggcccctggcgcgcctgaacgtcgccgaacggatggcgacgccgcttgcccaggaggag
tacgagcggttcctcgacttcttcggggagaagccggtccacgccacgttcgcctaccac
tgggcgcggctcgtggagatggtccaggcggcggaggccgcggccgccctcgcggcggag
aagggcctcaccgggaccgaggtccgcgggaagctcgggacgccgggagagggcgtgggc
gtggtggaggcggcgcgggggaccctgttccaccgctacgtcctcgatgcgcaggggctc
gtccaggacctcgacctcatcgtcgccaccacccacaacgcggcggggatcgggctgtcg
gtgaagcagatggccgaggacgtggtgcgggcgggaaccctcgacgaggtgctcctcaac
cggatcgagatggcgttccgcgcctacgacccgtgcttggcgtgcgcgacccacttcctg
ccgggcgagatgccgctcgtggtggagatctacgacacggaggggaaccttgatcgccgg
atctcccgctag
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