Candidatus Bipolaricaulis sibiricus: BIP78_0527
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Entry
BIP78_0527 CDS
T05809
Name
(GenBank) Ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
bih
Candidatus Bipolaricaulis sibiricus
Pathway
bih03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bih00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
BIP78_0527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bih03019
]
BIP78_0527
03009 Ribosome biogenesis [BR:
bih03009
]
BIP78_0527
03036 Chromosome and associated proteins [BR:
bih03036
]
BIP78_0527
Enzymes [BR:
bih01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
BIP78_0527
Messenger RNA biogenesis [BR:
bih03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BIP78_0527
Ribosome biogenesis [BR:
bih03009
]
Eukaryotic type
90S particles
RNase
BIP78_0527
Prokaryotic type
rRNA processing factors
BIP78_0527
Chromosome and associated proteins [BR:
bih03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
BIP78_0527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
QAA76293
UniProt:
A0A410FTF6
LinkDB
All DBs
Position
complement(523076..523762)
Genome browser
AA seq
228 aa
AA seq
DB search
MSNPLRTVLAQLGLDLPDGLLRTALTHDSYANEHGGDDNERLEFLGDAVLDLAVADISFH
LYPDQDEGELSKLRAVAVSRPVLAEVAAELGLGNLLLVGKGADEGGARTRPSVLASALEA
VFGAVFLRHGYAPARTLADTLLGPRISAGASVHAPDYKSLLQELGQARFGALPQYEVIAA
EGPEHKKVFAVRASLPAGEAIGRGRSKKEAEQAAAKRLYVRLSTEAAD
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaccccctgcgcaccgtcctcgcccagctcggtctggacctgccggatggcctc
ctgcgcaccgccctcacccacgactcgtacgccaacgagcacgggggtgacgataacgag
cgcctggagttcctcggcgacgcggtcctcgatctggccgtagccgacatttcgttccac
ctctatccggaccaggatgagggggagctctccaagttgagggcggtagccgtgtcgcgg
cctgtgctggccgaggtcgcagccgagctaggtctgggaaatctgctcctggtggggaaa
ggggcggacgagggtggcgcccgaacccgcccttctgttctcgcgtccgctctggaagcg
gtcttcggcgcagtcttcctgcgccatggctatgcccccgcccgcaccctcgccgacacc
ttgctgggccctcggatctcagctggagcaagtgttcacgcacccgactacaagtcgctt
cttcaggagctgggtcaggcccgattcggggccctcccgcagtacgaagtcatcgctgcc
gagggtccggagcacaagaaggtgttcgcagtccgggcgtcacttcccgcgggtgaggcc
atcgggcgcggccggtcgaagaaggaggccgaacaggctgcggcgaagcgcctctacgtt
cgcctgtcaactgaggccgcggactga
DBGET
integrated database retrieval system
