Candidatus Bipolaricaulis sibiricus: BIP78_0759
Help
Entry
BIP78_0759 CDS
T05809
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bih
Candidatus Bipolaricaulis sibiricus
Pathway
bih03030
DNA replication
bih03430
Mismatch repair
bih03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BIP78_0759
03430 Mismatch repair
BIP78_0759
03440 Homologous recombination
BIP78_0759
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bih03032
]
BIP78_0759
03400 DNA repair and recombination proteins [BR:
bih03400
]
BIP78_0759
Enzymes [BR:
bih01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BIP78_0759
DNA replication proteins [BR:
bih03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BIP78_0759
DNA repair and recombination proteins [BR:
bih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BIP78_0759
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
SPDY
DUF6969
HROB
Motif
Other DBs
NCBI-ProteinID:
QAA76525
UniProt:
A0A410FTV9
LinkDB
All DBs
Position
complement(748471..751848)
Genome browser
AA seq
1125 aa
AA seq
DB search
MAFVHLHVHSEYSLLDGMGRVRELVARAAELGMPALALTDHGNLSGAIKFYRAAREAGVK
PLLGVELYVAPDSRFSRDASASRSPYHLVTLAMDRTGWQNLLFLANRAHTEGFYYKPRVD
LDLLAEHSAGLIALSACESGEVQRLLLQGRGEEAARAAGRLAEIFSGRFYLELQDHGLER
NRGVIRDQLALAGRLGLPVVATSDVHYLDADDREPHRVLINIQAGKKLSDPDARAFDGTG
YHFLTEEEMAERFREVPGALAATVAVAERCELELELGRRLLPRYPSALSPNEELTAQAWA
GARRRFGDPLPAHVQERLTYELDVITRMDLAPYFLIVADFVGYARRNRIPVGPGRGSAAG
SLVAYALGITQVDPLRFHLLFERFLNPDRVTLPDFDIDFCVRGRDEVIRYVAERYGRDHL
AQIATFDRMAARSVVRDVARVLGLPYEKSDRIAKLVPFGMALPRALEQVPALREMAEGEE
DTRKLFAIARRLEGLLRNSSTHAAGVVIAPEPLERFVPLLRLSDGQFVTQFDMHDVEAVG
LLKMDFLGLRNLTLLDDVARLVETRTGIEVNLDQLPLDDRATYELIQSGQTTGVFQIESA
GMRALIRRLEPTEFRDLIAILGLFRPGPLDSGMADDYIERKHGRQPVTYPHPATEEVLSE
TYGLPIYQDQILLLAQRLAGFTLGEADLLRRAMGKKKPEEMAEMESRFVEGCIQNGIAAD
EARRIFSDIEKFARYGFVKAHSTAYAFITYWTAYFKAHYPTEFMAALLTSVQDNTDKVAA
YIDDCRAMGIEVLPPDVNESAVGFTPVGERRIRFGLGAIKHVGVGAVEAILANRGSGYRS
FFDFCQRIDPERVTRESVECMIKAGAMDRFGLPRKALMALACEGVRLAQLTRAQRASGQQ
SFFEAEDLAPKLAVGEEEYPREMLLEFERELLGLYLSGHPLDAHAAEIRARGAIPLAEAA
TQSRSFGIAGLVRALKTVATQDGPMAFLSLEDPTGEVEVIVGSRLYSTRASVLQERALLY
LRVRWSERNGSRRLQALEVEPLLGTRAAPALCWIEVPLDLVTRESAAQLGRILADHPGPA
AVRVRVIGDERALVVNAGPQYTVQPCPELGERLSQLGPGVRVEWR
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
gtggcgttcgttcatctgcacgtccactccgagtactcccttcttgacggcatgggacgg
gtgcgtgagcttgtggcccgtgctgccgagctgggcatgcctgcgctcgccctcaccgac
cacgggaacctctccggggccatcaagttctaccgagcagcgcgcgaggcaggggtcaaa
cccctgctcggggttgagctgtacgtcgcgccagactcacgtttctcccgagatgcctcg
gccagtcggtctccctaccacctcgtcacgttggcgatggaccggacgggctggcagaac
ctcttgtttcttgcgaaccgcgcgcacaccgaggggttctactacaagcctcgggtcgat
ctggatctcctcgcggagcactccgcgggattgatcgctctgtcagcgtgcgagtcaggc
gaggtgcagcggttgctcctgcaggggcggggggaggaggccgctcgtgctgcggggcgg
cttgccgagatcttctcgggcaggttctacctcgaactgcaggaccacggactagaacga
aaccgtggggtgatccgtgaccagctcgccctcgcgggccgcctcggtctccctgtggtc
gcgacctccgatgtgcactacttggatgccgacgatcgcgaaccgcaccgggttctcatc
aacatccaggcggggaagaagctgtccgatcctgatgcgcgcgccttcgacggcactggg
tatcacttcttgaccgaggaggagatggcagaacggtttcgggaggtcccaggcgccctc
gccgctacggtggccgtggccgagcgctgcgagctggagctggagctggggcggcgattg
ctgccccgatatccgagtgccctatccccgaacgaggagctgacggcccaggcgtgggcg
ggggctcggcgtcgattcggcgatccccttccggcccacgtccaggaacggctgacctac
gagctcgatgtgatcacgcggatggacctcgctccgtactttctcatcgtcgccgacttc
gtcggctacgcccgccggaacaggattccggtcgggccgggtcgtggttcggccgcgggg
tctctcgtggcctatgcgttggggatcacccaggtcgacccgttgcggtttcacctcctg
ttcgagcggttcctgaaccccgatcgcgtcaccctccccgacttcgacatcgacttctgt
gttcgggggcgggacgaggtcatccgctacgtcgcggagcggtacggtcgggatcacctt
gcccagatcgcgacgttcgaccgaatggccgcgcgatccgtggtgcgcgatgtcgcccgg
gtgctcggattgccctacgagaagtcggaccgcatcgccaagcttgtcccatttgggatg
gcgctcccccgtgccctggagcaggtgccagcgctgagggagatggcagagggggaggag
gacacccgcaagctgttcgccatcgcgcgacgtctggaaggattgctgcgcaacagctcg
acccacgctgcgggcgtcgtgatcgcgccggagcccttggagcgtttcgtcccgctgctt
cgcctgtccgatggccagttcgtgacccagttcgacatgcacgacgttgaggccgtgggc
cttctgaagatggacttcctcggcctgcgcaacctgaccctcctcgacgatgtcgcgcgg
ctggtggagacccgaacgggaatcgaggtcaacctggaccagcttcccctcgatgatcgg
gcgacctacgagctgatccagtccggacagacgaccggcgtgtttcagatcgagtcggca
gggatgagggcgctcatccggcgcctcgagccgacggaattccgcgatctcattgccatc
ttgggtctgttccgcccaggtccgctcgactccgggatggctgatgactacatcgagcgc
aagcacgggcgtcagcccgtcacgtacccccaccccgcgaccgaggaagtcctctccgag
acctacgggcttcccatctaccaggaccagatcctccttctggcgcagcgattggcgggc
ttcacgttgggggaagcggacctcctgcgacgggccatgggcaagaagaagccagaggag
atggcggagatggagtcacggttcgtcgaagggtgtatccagaacgggatcgccgccgac
gaggctcgccggatcttctctgacatcgagaagttcgcgcggtacgggttcgtcaaggcg
cactcgacagcctacgccttcatcacctactggacagcctacttcaaggcgcactacccg
acggagttcatggctgctctcctgacctcggtccaggacaacacggacaaggtcgcggcg
tatatcgacgactgccgggcgatggggatcgaggtgcttccgccggacgtgaacgagtcg
gcggtggggttcacgccagttggggagagacgcatccggtttgggttgggagcgatcaag
catgtgggagtgggcgcagttgaggcgatcctcgccaaccgcggctccgggtaccgaagc
ttcttcgacttctgccagcgcatcgacccggagcgcgtcacccgcgagtccgtggagtgc
atgatcaaggctggcgcgatggaccggttcggactcccgcgcaaggctctgatggccctt
gcctgcgaaggtgtgcgtctggcgcagctgactcgggcccagcgggcctcgggacagcag
tcgttctttgaggctgaggatctggcacctaaactcgcggtcggggaggaggagtatccc
cgcgagatgctgctcgagttcgagcgcgagctcctggggttgtacctgtccggccacccc
ctggatgctcacgcggcggagatcagggcgcgtggcgccatcccccttgccgaggccgcc
acgcagagccgcagtttcggcatcgccggtctggtgcgcgcgctgaagaccgtggcgacc
caggacggcccgatggcgttcctgtccctggaggatccgaccggcgaggtggaggtcatc
gtgggttcgcgcctgtacagcacacgggccagcgtcctccaggaacgcgcgttgctgtac
ctgcgcgtccgctggtctgaacggaatggatcgcggcggctgcaggcccttgaggtggaa
ccgctcctaggcacgcgcgcggccccagcgctgtgctggatcgaagtcccgctcgacctc
gtaacccgggagagcgcagctcagctgggtcggatcctcgccgaccatcccggcccggcg
gccgtacgggtccgcgtgatcggggatgagcgagcgctcgtcgtcaacgcgggtccccag
tacacagtgcaaccgtgcccggagctcggggagcgcctgtcgcaactcggccccggcgtg
cgggtggagtggcggtga
DBGET
integrated database retrieval system
