Candidatus Bipolaricaulis sibiricus: BIP78_0821
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Entry
BIP78_0821 CDS
T05809
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
bih
Candidatus Bipolaricaulis sibiricus
Pathway
bih02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bih00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BIP78_0821
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF7507
LTD
DUF7617
Big_9
DUF11
Big_1
Motif
Other DBs
NCBI-ProteinID:
QAA76587
UniProt:
A0A410FU18
LinkDB
All DBs
Position
807364..812376
Genome browser
AA seq
1670 aa
AA seq
DB search
MANLIELFSVSSNRVPRWAVGAVLLLAVLASGTVSPLVSAQNCNNYTVTFLGATFDGTNT
TFRYRVCSNGNPAISHWVMGLPGGCSTCADVVSAGRVGSSSVTWSCGTDPTTGVFGVKFD
FGFTSVGQCEEFWITLRGYWPTGYTTAAVKAGSGNCFYQVEGPACPPPGQPGLVLEKKTN
GVDADSPPGPVVVVGSTVTWTYEVTNTGNVTLTEIVVTDDQVGSIGTISTLAPGASATLT
KAGVAVAGQYANVGKAETTYNGQTVSDTDPSHYFGAAPGLVLEKKTNGVDADSPPGPVVV
VGSTVTWTYEVTNTGNVTLTEIVVTDDQVGSIGTISTLAPGASATLTKAGVAVAGQYANV
GKAETTYNGQTVSDTDPSHYFGAAPGLVLEKKTNGVDADSPTGPVVVVGSTVTWTYEVTN
TGNVTLTEIVVTDDQVGSIGTIPTLAVGASATLTKTGVAVAGQYANVGKAETTYNGQAVS
DTDPSHYFGADPSIDLVKTGTLNLGPNGQADAGDTISYTFAVTNTGNVTLTNVTVADPKV
TVVGGPIASLAAGATDTTTFTGTYVLTQADIDAGTFTNTATATGTPPSGPNVSDSDSDTQ
TLVGVPSIDIEKHTNGVDADSPTGPVVVVGSTVTWTYEVTNTGNVTLTEIVVTDDQVGSI
GTISTLAPGASATLTKTGVAVAGQYGNVGKAETTYNGQTVSDTDPSHYLGVDGHLAITPG
SATNEVGDPHTFLITAYAQGASPIGWSLVYTVTPTPTSESLSTPTVAPDGMSATWSLTIN
SAVPGTFVAIPTVTMTFPGGTEVVRTTDGLGGSTVPAQKTYLQGRISLSPAAATNEVGDP
HTLIAAVETTSDGLTWIPMSGVQVAFSIIGGTASFVGGVNTSITNGAGQAAAQIVSATPG
TVLVQAAADLFGDGTFIATTGTAGNGGNAQKTYVDARISVTPLGSVNPVGTNHAVTALVE
VNTGAGWVPAPNGTPVMFTLLNNTAGATFVTASTTSTTGGQASVTVFSSNPGGVAIRATA
DVTVAGLVVRRATGSGGLNGSDAVKNWVRSNEPPTADGLSLVTCRNTPLAFSLRGSDPDV
NLASPDQHPLAFAIIGAPTFGAVSGDLSAVTYSAPHSASVEVVYTPQLDFLGTDFVTYTV
TDPTGTFAVGAIRITVVDCGGEIAGGAGALGPRIVINEIAWGGTAADPNHEWIELYSSLG
EPIDLTGWTLRWRRKQPATVLEEYVKVVELRGAIDAFGFYLMERRTDDVVADIEADLIYE
ETGPIVITEIAWGGTAASRDDQWIELTNVTENAVDLTGWTLRWRLTQPTTPEEQAWKVVQ
LRGTVTAYGTYLLERGSDDAVRGVPADLIYAVALDPRGEVLELLDPAGNVVDTANAERMG
RSGWASGYGLGGVHPYASMERVNPFVRDAEHNWRGNEGVLTHGLDRDGVPLVATPRAVNE
QFLLWAYPEVNPAELPSDLAYLPFTLELSDRGEILELVDRAGNVVDTANADNPDRDGWAV
GYGLHGALLHATMERVDPSLPDLDTSWDANEYIVINGLDTDEACLVATARTTNEPVVMRS
AAEQASQAIGRGQILTVVVVAPPLCDAVRCLPHAVITRADPAFADQVMVVGDSGARVVWG
EPVERTDNFRFLVDTTSLEVGSYRVWISLGSSRLHVISFEVVEEAVARSR
NT seq
5013 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacttgattgagctgttcagtgtgagttcgaaccgcgttccgcggtgggcggtt
ggagcggttcttcttttggccgtgctggcgagtgggacggtatcaccgttggtttcggca
cagaactgcaacaactacaccgtgacattcctcggggcgacgtttgacgggacgaacacc
acctttagataccgtgtatgctccaatggcaacccggcgatcagtcactgggtgatgggc
cttcctggcggatgttcgacgtgcgccgacgtggtatcggcagggcgagtcggcagcagc
tcggtaacttggtcgtgcggaacggatcccactaccggcgtgttcggagtgaagttcgat
tttgggttcacctcagtcgggcagtgcgaggagttctggatcacgcttcgcggatactgg
cctaccggctacaccacagccgcggtgaaggcagggtcaggcaactgcttctatcaggtt
gaggggccggcatgtcctcctcccggccagccggggctggtgctcgagaagaagacgaac
ggggtcgacgccgatagcccgcccggtccggtggtggtggtggggtcgacggtgacgtgg
acgtacgaagtgacgaacacggggaacgtgacgctgacggagatcgtcgtgaccgacgat
caggtaggttcgatcgggacgatttcgacgttggcgcctggagcgagcgcgaccctgacg
aaggcgggggtagcggtagcgggccagtacgcgaacgttgggaaggccgagacgacgtac
aacggtcagacggtgagcgacacggatccgagccactactttggggcggcgccggggctg
gtgctcgagaagaagacgaacggggtcgacgccgatagcccgcccggtccggtggtggtg
gtggggtcgacggtgacgtggacgtacgaagtgacgaacacggggaacgtgacgctgacg
gagatcgtcgtgaccgacgatcaggtaggttcgatcgggacgatttcgacgttggcgcct
ggagcgagcgcgaccctgacgaaggcgggggtagcggtagcgggccagtacgcgaacgtt
gggaaggccgagacgacgtacaacggtcagacggtgagcgacacggatccgagccactac
tttggggcggcgccggggctggtgctcgagaagaagacgaacggggtcgacgccgatagc
ccgaccggtccggtggtggtggtggggtcgacggtgacgtggacgtacgaagtgacgaac
acggggaacgtgacgctgacggagatcgtcgtgaccgacgatcaggtaggttcgatcggg
acgattccgacgttggcggtgggagcgagcgcgaccctgacgaagacgggggtagcggta
gcgggccagtacgcgaacgttgggaaggccgagacgacgtacaacggtcaggcggtgagc
gacacggatccgagccactacttcggagcagacccgtcgatcgatctcgtgaagacaggc
acgctgaacctgggacctaacgggcaagcggatgcgggggacacgatcagctacacgttc
gcggtgacgaacactggcaacgtgacgctgacgaacgtgaccgtggcggaccccaaggtg
acggtggtcggagggccgatcgcgtcgctggcggcgggggcgacggacacgacgacgttc
acgggaacgtacgtactgacgcaagcggacatcgacgcagggacgttcacgaacaccgcg
acggcgacggggacgccgccgagcggaccgaacgtgagcgatagcgattccgacacgcag
acgctcgtcggggtgccgtcgatcgacatagagaagcacacgaacggggtcgacgccgat
agcccgaccggtccggtggtcgtggtggggtcgacggtgacgtggacgtacgaggtgacg
aacacggggaacgtgacgctgacggagatcgtcgtgaccgacgatcaggtaggttcgatc
gggacgatttcgacgttggcgcctggagcgagcgcgaccctgacgaagacgggggtagcg
gtagcgggccagtacgggaacgttgggaaggccgagacgacgtacaacggtcagacggtg
agcgacacggatccgagccactacctgggggtagacgggcacctcgcgatcacgccgggg
tctgcgacgaacgaggtgggtgacccgcacacgttcttgatcacggcgtacgcacaaggg
gcgagccccattgggtggagcctggtctacacggtgaccccgactccgaccagcgagagc
ctgagcacgcccacggtggcgcccgacgggatgagtgccacctggagcctcacgatcaac
agcgcggtacccggaacgttcgtggcgatcccgaccgtgacgatgacgttccccggcggg
accgaggtcgtgcggacgacggacggcctgggcgggagcaccgtgccggcgcagaagacc
tacctccaggggcggatcagcctgagtccggcggcagccaccaatgaggttggagatccg
cacacgctgattgcagcggtcgagacgacgagcgacggactcacctggatcccgatgtcg
ggggtgcaggtggcgttctccatcatcggcggaacggcgagcttcgtgggtggggtcaac
acctctatcaccaacggggcgggccaggcggcagcgcagatcgtctctgcaaccccggga
acagtcctcgtgcaagccgcagctgacctgttcggtgatggaacgttcatcgccaccacg
ggcacagcgggcaacgggggcaatgcgcagaaaacctacgtggacgccaggatcagcgtg
accccgctggggtcagtgaacccggtgggcacgaaccacgccgtgaccgcgcttgtggag
gtcaacacgggcgcaggctgggtgccggcgccgaatggaacgccggtcatgttcacgctg
ctcaacaacaccgccggagctacgtttgtcacagcatcgaccacgtcgaccacggggggg
caggcctccgtgaccgtgttctcatcgaaccctggtggcgtcgccatccgggcgacggcg
gatgtgacggtcgcggggctggtcgtgcgccgggcgaccgggtccggtggtctgaacggg
tcggacgccgtcaagaactgggtgcgcagtaacgagccgcccacggcggacggcctatct
ctggtgacgtgccggaacacgccccttgccttctccctccgggggagcgaccctgacgtg
aacctggccagtccggaccagcatccgctggcgttcgcgatcatcggggcgccgaccttc
ggcgcggtgagcggagacctgagcgctgtcacgtacagcgcgccgcacagcgcgtcggtg
gaggtggtgtacacaccgcagcttgacttcctcggcacggacttcgtcacctacacggtc
accgatcccactggcacgttcgcggtgggtgcgatccggatcactgttgtggactgcggc
ggggagattgccggtggagccggtgcccttgggccaaggatcgtgatcaacgagatcgcg
tggggcgggacggcggcagacccgaatcacgagtggatcgagctctacagctcgctgggc
gaaccgatcgatctcaccgggtggacccttcgctggcgccggaagcaaccggcgacggtg
ctcgaggagtacgtgaaggttgtggaactccgcggggcgatcgacgcgttcgggttctac
ctcatggagcgccgcaccgacgacgtggtggctgacatcgaggcggacctcatctacgag
gagacgggaccgatcgtgatcacggagatcgcgtgggggggaacggcggcgagccgtgat
gaccagtggatcgagctcaccaacgtcacggagaacgcggtggacctcacgggatggacc
ctccgctggcggctcacccagccgacgacgcccgaagagcaggcgtggaaggtggttcaa
ctccgcgggaccgtgaccgcctacgggacgtacttgctggagcggggcagcgacgacgcg
gtacggggagttccggctgatctcatctacgccgtggctctcgacccgcgcggcgaggtt
ctggagctcctggatccggcggggaacgttgtggacacggcgaacgcggagcgcatgggg
cgctctggctgggcgagcgggtacggcctagggggtgtccatccgtacgcgtcgatggaa
cgagtgaacccctttgttcgcgacgcagagcacaactggcgtggcaatgagggtgttctc
acccatggtttggaccgggatggggtacccctcgtcgctacgccgcgggcggtgaacgag
cagttcctgctctgggcgtacccggaggtgaatccggcggaactcccctcggatctggca
taccttccgttcaccttggagctgtccgaccgcggcgagatcctggagctggtggatcgg
gcggggaacgttgtggacacggcgaacgccgacaacccggatcgcgacgggtgggcggtg
ggatacggtctgcacggggcgctgctgcacgcgacgatggagcgggtggacccatcgctg
ccggatctcgacacgtcgtgggacgccaacgagtacatcgtgatcaatggtctcgacacc
gacgaggcgtgcctcgtggccacagcccgcacgacaaacgaaccggtggtcatgcgatct
gcggcggaacaggcatcgcaggcgattgggcgtggtcagatcctcacggtggttgtcgtg
gctccaccgctgtgtgacgcagttcgctgtctcccccacgccgtgatcacccgagctgac
cccgcgttcgccgaccaggtgatggttgttggggacagcggggctcgggtcgtctggggg
gaaccggtggagaggacggacaacttccgcttcctggtcgacaccacgtcgctcgaggtc
gggagctaccgggtgtggatatcgttggggagcagtcggcttcacgtaatctcgttcgag
gtggtcgaggaagccgtcgcgcggagccgataa
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