Candidatus Bipolaricaulis sibiricus: BIP78_0974
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Entry
BIP78_0974 CDS
T05809
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bih
Candidatus Bipolaricaulis sibiricus
Pathway
bih03420
Nucleotide excision repair
bih03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BIP78_0974
03430 Mismatch repair
BIP78_0974
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bih03400
]
BIP78_0974
Enzymes [BR:
bih01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BIP78_0974
DNA repair and recombination proteins [BR:
bih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BIP78_0974
MMR (mismatch excision repair)
Other MMR factors
BIP78_0974
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QAA76740
UniProt:
A0A410FV08
LinkDB
All DBs
Position
982277..985195
Genome browser
AA seq
972 aa
AA seq
DB search
MADILDGLTEEQREAVAHRGGPLLVLAGVGTGKTTVITRRIAYLIAEGIVERPSQLLVFT
FSHQAAEEMLDRAFDWIRYAALDAWIATYHAVCERILRENAPLAGLPPDFRVLDEWDQRV
FLLDHLTELPTRTLRPRALRQPLRFLSPLLSFIGRAKDDALSPERYRAWLNDVQASLPGD
EADLHRELADLYAAYQELLSAEGLVDFGDLIVRAVRLLENRPGLRAEYHRRFPHVLADEF
QDTSRAELRLVELLAGHGNATAVGDDDQAIYGFRGVPWDNLLAFLRAFPASKVVVLTRNF
RSTQRILDASSRLIRANAYRLEALSLRGEIAYSITKELTSPHGPGDAPIHRHFPSVEDEA
EFVAQEIGRLHGSGIPFREIALLYRNRYRPDPYLRALSDAGIPWTLAGRFRAGMFDQEVI
RLLMSFLRTLADPGDSQSLYHLLGSPIYRLSGEDLAFLTSRSQREHRPLRQVLVDAVARS
SLSAEGQQIAERALADLAACEALARGNPAGRVLYAFLMERTGYLQALVHSEDPAAGRSVE
HIAEFFERVVHRFEDVARHDRVPWFVRYVDELRELGWNPMIGEADPGADAVQVMTFHQAK
GMEYEAVFLTGLVEDFFPGRITRPTFSLPRGLIGDEMPEDRAHLEEQRRLFYVGMTRAKR
RLYLLSADDYRPPGEAPRKRAAKISRFVLEALGEENLGPRVSEATALFRIRREGKEPTPP
AVAVAGGGPLQLSFRQVDDWLTCPLKYRYVHVLRVPIRLHPIVILGNAVHQAIQAYHLAK
VQGRTLPFSDLDGVFRHAWRSEGFLSAHHEQEMLDHGLAALRSFYAFEEGSGTQPAFVEK
FFAFVEEEAKVIGYWDRVDRGENGAVIIDYKTSDVGEEAADRRAAESLQLAMYALGYERM
FGERPREVQLRFLTPGVVVGRATPTDRMVGRALEAIHDAAAGIRSGDFAARPSFTACSYC
AYRTICPSAMPL
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggcggacatcctggacgggctgacggaggagcagcgcgaggcggtggcccaccgcggc
gggcccctcctcgtgttggccggtgtgggaacagggaagaccacggtcatcacccgtcgc
atcgcctacctcatcgccgaggggatcgtcgagcgcccgagtcagcttctcgtgttcacg
ttctcccaccaggccgctgaggagatgctcgaccgagccttcgactggattcggtacgct
gcactcgacgcgtggatcgccacgtaccacgcggtgtgcgagcgcattctgcgcgagaat
gcaccgctggcgggactcccccctgacttccgcgtgctcgacgagtgggaccagcgggtg
ttcctcctcgaccacctcaccgagctgcccacgcgaacgcttcgtccccgcgccctccgc
cagccgctgcgcttcctctcgccgctcctctcgttcatcgggcgcgcaaaggacgacgcg
ctgtcgccggagaggtaccgcgcctggctgaacgacgtccaggcatcccttccgggtgac
gaggccgacctccatcgcgagctcgctgacctgtacgccgcataccaggagctcctcagc
gcggaaggacttgtggatttcggggacctcatcgtgcgcgcagtgcgcctgctcgagaat
cggccgggtctgcgtgccgagtatcatcgccgcttcccccacgtactggccgacgagttt
caggacaccagccgcgctgagctccgactggtcgaacttctcgcgggacacgggaacgcg
accgcagtaggggacgacgatcaggcgatctacgggttccgcggggtcccgtgggacaac
ctcctcgcgttcctacgtgctttccccgcatccaaggtggtggttctgacccgcaacttc
cggtccactcagcggatcctcgatgcgtcctcccgtctcattcgtgccaacgcataccgt
ctcgaggcgctgtccctacggggggagatcgcctactcgatcaccaaggagctcacctcg
ccccatggcccgggtgacgcgccgatccatcggcacttcccgtcggtggaagacgaggcg
gagttcgtggcccaggagatcggcaggctccatggctccggcattccgtttcgggagatc
gcgcttctctaccggaaccggtatcgccccgatccgtacctgcgggccctgtccgacgcg
gggatcccgtggaccctggcggggcggttccgggccggaatgttcgaccaggaagtcatc
cgcctcctgatgtccttcttgcgaacactggccgaccccggggacagccaatccctctac
cacctgctcggatctccgatctaccgcctgagcggggaggatctggcgttcctcacgtca
cgatcacagcgcgaacaccgtccactgcggcaggtccttgtcgatgcggtcgcccgctca
tccctcagtgcagagggccagcagatcgccgagcgggcccttgccgacctcgccgcgtgt
gaggccctcgcgcggggcaacccagccggccgcgtgttgtacgcgtttctcatggagcgg
accgggtacctccaggcgctcgtccactccgaggaccccgcagcggggcgatccgtcgag
cacatcgccgagttcttcgagcgcgtggtgcatcggttcgaagatgtggcgcgccacgat
cgtgttccgtggttcgtgcgctacgtcgacgagctgcgggagctggggtggaacccgatg
atcggcgaggccgacccgggggcagatgccgtgcaggtaatgacgttccatcaggccaag
gggatggaatacgaagcggtgttcctcaccgggctggtcgaggacttcttccccgggcgg
atcactcgccccacgttctctctcccccgcggcctaatcggggatgagatgcccgaggac
cgcgcgcacctggaggagcagcgccggctgttctacgtggggatgacccgggccaagcgg
aggctctaccttctctccgccgatgactaccgcccgcccggggaggcgccgcgcaagcgg
gcggcgaagatctctcgattcgtcctcgaagccctgggagaggagaacctcgggccacgc
gtctccgaggcaacagccctgttccggattcgccgcgaggggaaggagcccacgcccccg
gcagtcgccgtcgccgggggcgggccgctccagctttcattccgccaggtggacgactgg
ctgacgtgcccgctcaagtaccgctacgttcacgtgttgcgggtaccgatccggcttcac
ccgatcgtgattctggggaacgcggtccatcaggcgattcaggcctaccatctcgccaag
gttcagggccgaaccctcccgttctccgatctcgacggcgtgttccgccatgcctggcgc
tcggaggggttcctgtccgcccatcatgagcaagagatgctcgaccacggtctggctgcg
ctgcggtcgttctacgcgttcgaggaaggctcggggacccagcccgcgttcgtcgagaag
ttcttcgccttcgtggaggaggaagccaaggtcatcgggtactgggaccgggtggatcgc
ggggagaacggggcggtcatcatcgattacaagacctccgacgtgggcgaggaggcagcg
gatcgacgagcagcggagtcgctgcagctcgcgatgtacgccctgggctacgagcgaatg
ttcggcgagcggccgcgcgaggtccagctgcggttcctgactccaggagtggtggtgggc
cgcgctaccccgaccgaccggatggtggggcgggcgctcgaggccattcacgatgcggca
gcggggatccggtcaggggatttcgccgcacggccatcgttcaccgcctgctcctactgc
gcgtaccgcacgatctgcccgtcggcgatgcccctgtga
DBGET
integrated database retrieval system
