Candidatus Bipolaricaulis sibiricus: BIP78_1236
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Entry
BIP78_1236 CDS
T05809
Name
(GenBank) hypothetical protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
bih
Candidatus Bipolaricaulis sibiricus
Pathway
bih02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bih00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BIP78_1236
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bih02000
]
BIP78_1236
Transporters [BR:
bih02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
BIP78_1236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QAA77002
UniProt:
A0A410FVK1
LinkDB
All DBs
Position
complement(1258289..1259845)
Genome browser
AA seq
518 aa
AA seq
DB search
MKRVMMVVVLALVMLSLPVLAQPGRPGGILKAAMQTNPPTLDPHLSTNVVVRQVAPYVFE
TLVVYGEEYDIIPQLAESWEISSDGLVYIFYLRAGVRFHNGKTLTADDVVASLERYFAYS
PGGGRFAGIVESVTALNPLTVEIRVKEPTLLLVTLAIPDPFLAIYPAEIIRGRQAEVRGS
DLIGTGPYRFAEWRPDVHVRLVRFAEYTADERFSGPSGLGGRRTAYFEEIQFIPVLEQAA
RLAGLLTGEFDYAESLPITAYEQLLRNPDVVPNVLKPRWALVLELNQSEPPMDNVLFRRA
LIAALGMEDVLRAVTFGNPAFYRTQPGFFFPEQAVWHTDAGAEGYNKKDLAEVRRLLAEA
GYNFEPIIFLSNRDYDWMYKCTLAVASQLQQAGINVIVEFSDWPSQIQRALTQKGWHINQ
TGWSPRLDPIQLATSLKCGAPYAYMYCNPEVDRLLSELSRDRPVEERQRIFHELQRYMWE
DVAVLRIGDFFTLEGTNARLRGYTPWYVIPRFWDCWKE
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcgtgatgatggttgttgtgttagcgctggtgatgctttcgctaccggtactt
gctcaaccggggcgccctggaggaatcctcaaggcagcgatgcagacgaatccacccacc
ctagatccacacctcagcaccaacgtagttgtccgtcaggtagccccctacgtttttgag
accttagtggtctacggggaggagtacgacatcatcccacagcttgctgagagctgggag
ataagttccgacgggcttgtctacattttctatctgcgcgcgggggtgagattccacaac
ggaaagactctaactgccgatgatgtggtagcatctcttgaacggtattttgcctattcg
ccagggggcggaaggttcgccgggattgtggagagtgtcacagctctcaatcccttgacg
gtcgagatcagggtcaaagagcctactcttctgctagttaccctggccattcctgatccg
ttcttggccatctacccagcagagatcatccgagggaggcaagctgaggtacgtggttca
gatctaatcggcactggaccgtaccgcttcgctgagtggagaccggatgtgcacgtgcgc
ctcgtcaggtttgccgagtacaccgccgacgaaaggttctctggaccgagcgggttggga
ggacgccgcactgcctactttgaggagatccagttcatccctgtgttggagcaggctgct
aggttggcgggtctgctcaccggagagttcgactacgcggagtccctccccatcacggct
tacgaacagctactccgtaaccctgatgtagtgccgaacgtgctcaagccacgatgggcg
cttgtcctggagctcaatcagtccgagccaccgatggacaacgtcctattccggagagcg
ttgatcgcggcgctcggcatggaggacgtcctccgcgctgtaacgttcgggaacccggcg
ttctaccgaacgcaaccgggctttttcttcccggagcaggcagtatggcacacggatgcc
ggggcagaaggatacaacaagaaggatctggcggaggtacgcaggcttctcgccgaagcc
gggtacaactttgagcccattatcttcttgtcgaaccgggattacgactggatgtacaag
tgtacattggcggtggcctcccaacttcagcaggctggcatcaacgtcatcgtggagttc
tctgactggccttcccagatccagcgtgcattgacccagaaggggtggcacatcaatcaa
accgggtggtctccgcggcttgaccctatccagctggcgacgagcctgaaatgtggagcc
ccctacgcctacatgtactgcaaccctgaggtggaccggctgctgtcggaactgtcgcgc
gatcggccagtagaggaaagacagcgtatcttccacgagttgcagcgttacatgtgggag
gatgttgccgtattgaggatcggtgatttcttcacccttgaagggacgaatgcgcgcctg
agggggtacacgccgtggtacgtcattccgcggttctgggactgttggaaggagtga
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