Bifidobacterium indicum: BINDI_0121
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Entry
BINDI_0121 CDS
T03564
Name
(GenBank) RCC1 repeat-containing protein
Organism
bii
Bifidobacterium indicum
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_RLD
RCC1
RCC1_2
Flg_new
Alsin_RLD
Motif
Other DBs
NCBI-ProteinID:
AIC91407
UniProt:
A0A087VSS1
LinkDB
All DBs
Position
complement(214730..220075)
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AA seq
1781 aa
AA seq
DB search
MRMWNVFQSRRRLARPVVAVVSVMAVLGAGLVSIAQAVDSPVSAGAAPGVLAPADSGQAR
PVPVDGPDRVPSPSSDASSSSSSDASSSSSGGSLSSGVSSSGGPTVSGVSSLSAAGRSRV
VLPSGPAGLATSSPLSSHAADAPSVQTAVGVRAGVVHTVSFSSEADSTGVPGAQSVPDGG
TASWPREDPSRPGWTFNGWFLDDAAYDFSAPVTGDVTLTARWGRRSVTPDRGPWQGGTDV
RISDAADGVRFTQVAAGAGFSVALGSDGNAYTWGDNTTGQLGAGEGAPSHRAAPAMAAMP
DRVGFTAIAAGDSHAIALDRDGRAWTWGDDTDGSLGRGTTGGQASRPGPAATPAGVRFTA
VSAAPHHSMALDTDGGVWTWGRNSLGRTGNGATPARVPMPTGTAFTAVSSSAGSAMALDT
DGRIWSWADTDTGAVGHDGPRDTPAPVDTTQRFTAVSSGDDHAIAIARDGTVWTWGRNSH
GQLGRTPDSANPADRPGQAPGPTEATRVNAGTGVSTAITPDTAWAWGLNDHGQLGGSTDD
VTTPAPIPAPDRAAPGFHYTAAAPATTGTGTPAHTLLLGNDGHTYATGNNTTGQLGDNTQ
NPTTRPTTTWQPTHWQPTDILFGQSHNLATPHREPDGWHTTSPRHPIGTVTLTITHTDHG
TPQPDDTSCRFTYTGDTATITYHTDHGTPPPPQTIPKGDTAPRPDDPPTHDGWTFNGWFQ
GDTPYDFSQPVTHDLTLTAKWAQWTTTPTQGPWQGGTEVHLSRSTSEVRYAQITAGRNCS
LAVGSDGNVYGWGYNHYSQVAEYEKNDLPAPIPVFTPEGAKIIQVSAGFYHVMALDSEGR
IWTWGFDSDGQLGRTPTAATPARRPGLVAAPKDVGFIAVSAGRTHSAALDQDGNIWTWGN
NTYKQLGRDTSGTNDATPEKIRPSRGTAFTMVSAGLTHSIGLSADGTAWSWGGGIDNSHI
RTETVLGHAGGTDLAPVDTDLRFTAVSAGYYHSLAIAQDGTVQSWGNWSTRQLGRSPTTT
APANRPGRVPGLTGATGISAGRRYSIAITGTDVWGWGLNAQGQLGTGTNNGSSSGVDTPE
RIPAPEGTPAGFVYTNAVASMSGEHTLTIGSNGEAYAFGSNASGQLGDNTINEATVGLAG
ANKPTMVWHPVGASITSVLFGTKPNIGKVQRTAGGWLTVSPRHRPETVSLTVKSSTGIRS
APVRTEDTGLTFTFTGNIVTLSFVSDHGAPTPAQQVAAGEPTQRPADPSEEGWTFDGWFD
GDVAYDFAAPLEHDLTVTGRWHRTGRWVLSPDHGSEHGGDTLTLTAPAAPGLRLASVDTG
GSSSLGVGSDGNLYAWGDNTDGQLGDGTTSQHTTPTLIPRPDGTDTGFFWVQAAAGRTHS
AAVGSDGNLYAWGDNTCGQLGDGTNTQRTTPVKVILPGGKGLTWIRVAAGDGYTLAIGSD
DNLYIWGSLPGGLGDINGTTASTRPVMVALPQGVPPTFRFEKIAAGDRHATAIGSDENLY
TWGSNTHGQLGHADTGVPAAAATPTVAAWDDPQQPVGYVQASAAGDHTMAIDLQGRLWVW
GTLADGTDTATPARIQPAGTTDTYRFTHTSTGRAHYTATGEDHRTWTWGDNTNGQLGHAT
STPKRPTVIPGLNTTVTASMADTTIAIDTSGNTQAWGNNSNGQGGHGDTGETPTPCTSAI
PPHPTPTDLTIDSTTLPLRRTGPNTWEATTTAHDPGAVPVRVRWTLAGQAQPDDTSNTYT
YLHIFTLPNAGGTGIVLLIIAGTLILAAATANRQRRIPKHH
NT seq
5346 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatgtggaacgtgttccagagccgtcgtcgtttggctcgcccggtggttgccgtc
gtgtcggtgatggcggtcttgggtgccggcctggtgtccattgcgcaggcggtcgattcc
ccggtgtccgctggggcggcacccggggtcctggcccctgccgacagcggccaggctcgc
cccgtcccggtggatggtccggatcgggtcccttccccgtcgtccgacgcctcgtcgtcc
tcttcttccgatgcctcgtcgtcttcgtccggtggctccctgtcttccggcgtgtcctcg
tcgggtggccccactgtttcgggtgtgtcctctttgtcggctgccggccggtcccgtgtg
gtgttgccttcgggtccggcagggttggcgacgtcgagccccttgtcgtcccacgccgcg
gacgccccttccgtgcagacggcggtgggtgtgcgcgcgggtgtggtgcatacggtgtcg
ttctcgtcggaggcggacagcacgggcgtgccgggggcgcagtcggtgccggacgggggc
acggcgtcctggccgcgtgaggatccgtcccggccggggtggacgttcaacgggtggttc
ctggacgacgccgcgtacgacttctccgcgcccgtgaccggcgacgtgacgctgaccgcc
cggtggggccgccggtccgtgacccccgaccggggcccctggcagggcggcaccgacgtc
aggatctccgacgcggccgacggggtgaggttcacccaggtcgccgccggggccgggttc
tccgtcgcgctcggcagcgacggcaacgcctacacctggggcgacaacaccaccggccag
cttggcgccggcgagggcgcgccctcccaccgcgccgcccccgccatggccgccatgccc
gacagggtcgggttcaccgccatcgctgccggcgactcccacgccatcgccctcgaccgc
gacggcagggcatggacctggggcgacgacaccgacggctccctcggccgcggcaccacc
ggaggccaggcctccaggcccggacccgccgccacgcccgcgggtgtaaggttcaccgcc
gtcagcgccgccccccaccactccatggccctcgacaccgacggcggggtatggacctgg
ggccgcaacagcctcggccgcaccggcaacggcgccacccccgccagggtccccatgccc
acaggcaccgccttcaccgccgtcagctcctccgccggctccgccatggccctcgacacc
gacggcaggatctggtcctgggccgacaccgacaccggcgccgtcggccacgacggcccc
cgggacacccccgcccccgtcgacaccacccaacgcttcaccgccgtcagcagcggcgac
gaccacgccatcgccatcgcccgcgacggcaccgtctggacctggggccgcaacagccac
ggccagctcggccgcacccccgacagcgccaaccccgccgaccggcccggacaggctccc
ggacccaccgaagccacccgcgtcaacgccggcactggtgtcagcaccgccatcaccccc
gacaccgcatgggcatggggcctcaacgaccacggccagctcggcggcagcaccgacgac
gtcaccacgcccgcacccatccccgcacccgacagggcagcacccggcttccactacacc
gccgccgcacccgccaccaccggcaccggcaccccggcccacaccctcctcctcggtaac
gacggccacacctacgccaccggcaacaacaccaccggccagctcggcgacaacactcaa
aaccccaccacacggcccaccaccacctggcagcccacccactggcaacccactgacatc
ctcttcggccagtcacacaaccttgccacaccccaccgcgaacccgacggatggcacacc
acctcgcccagacaccccatcggcaccgtcaccctcaccatcacacacaccgaccacggc
acaccccaacccgacgacaccagctgccggttcacctacaccggcgacaccgccaccatc
acctaccacaccgaccacggcacacccccaccaccccagaccatccccaaaggcgacacc
gccccacgacccgacgacccacccacccacgacggatggaccttcaacggctggttccaa
ggagacactccatacgacttctcccaacccgtcacccacgacctcaccctcaccgccaaa
tgggcacaatggaccaccacacccacacaaggaccatggcaaggcggcaccgaagtgcac
cttagccgaagcacctccgaggtacgatacgcccaaataactgcaggcaggaactgctct
ctggccgtcggcagcgacggcaacgtatacggatggggttacaaccactactcgcaagta
gccgaatatgaaaaaaacgacctgcctgccccgataccggtcttcacgcccgagggtgcg
aaaatcattcaggtatccgccggtttttatcacgtcatggctctcgacagcgaaggcaga
atctggacttggggattcgactcggacggacagctgggccgcactcccaccgcggcaacc
cctgcaagacgaccaggcctggtcgccgcacccaaggacgtaggtttcatcgccgtcagc
gccgggcggacacactctgcagccttggaccaggatggcaacatctggacctggggaaat
aacacctacaaacagctggggcgcgacaccagcggtaccaacgatgcaacacctgagaaa
ataaggccatcgaggggaaccgcattcactatggtcagtgccggcctcacgcactccata
ggcctatctgccgacggaaccgcatggtcctggggtggcggcatcgacaacagccacatc
cgcaccgaaaccgtactcggtcacgccggcggcaccgatcttgccccggtagataccgac
ctacgattcacagccgtcagcgccggctactaccactccctggcaatcgctcaggacggc
accgtccagtcttggggaaactggtcgaccaggcagctgggccgatccccaaccaccacc
gcacccgccaaccggcccggacgggtccccggcctcaccggagcaaccggcatcagcgcc
ggccgcaggtactctatcgccatcaccggcaccgacgtttggggatggggcctcaacgcc
cagggccagctgggcaccggtaccaacaacggatccagcagcggtgtcgacacccccgaa
cgcataccggcaccagaggggacacccgcggggttcgtgtataccaacgccgtcgccagc
atgtcgggcgagcacacactgaccatcggttccaacggcgaagcatatgcgttcggaagt
aacgccagcgggcagctcggagacaacaccatcaatgaagcgactgttggcctggcaggg
gcaaataaaccgacgatggtctggcatccagtgggcgcctcaatcacgagtgttctgttc
ggcaccaaaccgaatattggcaaagtgcagcgcacagcgggcgggtggcttaccgtctcg
ccccggcacaggcctgagaccgtctccctgaccgtcaagtcctccaccggcattcgctca
gccccagtcagaaccgaggacactggtctgacgttcactttcacgggcaacatcgttact
ctgagcttcgtgtccgatcacggcgcccccacacccgcgcagcaggttgccgcgggagag
cccacccagcgccccgcggacccgtccgaggaggggtggaccttcgacgggtggttcgac
ggggacgtggcctacgatttcgccgcgcccctggagcacgacctgaccgtgaccggacgc
tggcaccgcaccggccgatgggtcctgagcccggaccacggcagtgaacacggtggtgac
acgcttaccctgaccgcacccgcagcacccggcctccgtctggcatccgtggatacgggc
ggatcgtcctccctgggcgtcggttcggacggcaacctgtacgcatggggagacaacacc
gacggccaactcggagacggcaccacaagccagcacaccactcccaccctgattccccgc
ccagacggcaccgacaccgggttcttctgggtgcaggccgcggccggacgcacccacagc
gccgccgtcggatccgacggcaacctgtacgcatggggagacaacacctgcgggcaactc
ggagacggcaccaacacccaacgcaccacacccgtcaaggtcatcctccctggcgggaag
gggctcacctggattcgggtcgcagccggtgacggatacaccttggcgatcgggtcagac
gacaacctgtatatctggggcagtctgcccggtggactcggtgacatcaacggcaccacc
gccagcacccgacccgtcatggtcgccctgcctcaaggcgtgccacccacgttccgcttc
gagaaaatcgctgccggtgacaggcatgccacggcgatcgggtcggatgagaacctgtat
acctggggatcgaacacacatgggcagctcggccacgccgacaccggagtacctgccgcc
gcagccacacccaccgtggccgcctgggacgacccgcagcagcccgtaggctatgttcag
gccagcgccgcaggcgaccacactatggccatcgacctgcagggacgtctctgggtctgg
ggcaccctcgccgacggcaccgataccgcaacccccgcacgtatccagcccgcaggcacg
accgatacataccggttcacccacacgtccaccgggcgcgcccactacaccgccaccgga
gaagaccaccgcacctggacctggggcgacaacaccaatggacagctcgggcacgccacc
agcaccccaaagcggcccacggtcatacccggtctgaacaccaccgtcaccgccagcatg
gccgacaccaccatcgccatcgacactagcggcaacacccaggcatggggaaacaactcc
aacggacagggcggacacggggacaccggcgaaacccccacgccatgcacctccgccatt
ccccctcacccaacacccaccgacctgaccatcgactccaccacgctccccctgcgccgg
acaggaccgaacacctgggaggcgaccaccacggcccacgaccccggggctgtgcccgtg
cgcgtcagatggaccctcgccggacaggcccagcccgatgacacctccaacacgtacacc
tatctgcacatcttcaccctgcccaatgccggaggcacaggcatcgtcctcctgatcatc
gcaggcacccttatccttgccgccgccacagccaaccggcagcggcgcatccccaaacac
cattaa
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