KEGG   Bifidobacterium indicum: BINDI_0213
Entry
BINDI_0213        CDS       T03564                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
bii  Bifidobacterium indicum
Pathway
bii02024  Quorum sensing
bii03060  Protein export
bii03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:bii00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    BINDI_0213
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    BINDI_0213
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    BINDI_0213
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:bii02044]
    BINDI_0213
Enzymes [BR:bii01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     BINDI_0213
Secretion system [BR:bii02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   BINDI_0213
  Eukaryotic Sec-SRP protein
   BINDI_0213
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N MeaB CbiA AAA_22 ArsA_ATPase cobW nSTAND3 AAA_31 MMR_HSR1 Zeta_toxin APS_kinase AAA_18 AAA_26 nSTAND_NTPase5 AAA_33
Other DBs
NCBI-ProteinID: AIC91498
UniProt: A0A087VT28
LinkDB
Position
complement(339511..341127)
AA seq 538 aa
MAAFSSLTDRLSQAFTHLRSKGKLTEADIDGTIREIRRALLDADVSLDVVRSFTARIRER
ALGEEVSKALNPAQQVVSIVYEELTGILGSGVDRPLNFAKNPPTVIMLAGLQGAGKTTLA
GKLGYWLKDAGHTPLLVAADLQRPNAVTQLQVVGERAGVPVYAPEPGVQSESSDVVSPGQ
AQGDPVQVARDSVRLAQEKLYDVVIIDTAGRLGVDQELMEQARNIRDAVNPDEILFVIDA
MIGQDAVATAEAFNKGVDFTGVVLSKLDGDARGGAALSVASVTGKPILFASNGEGLKDFE
VFHPDRMASRILDMGDILTLIEQAQREFDEEEARKAAGKMSEGSFGLDDFLEQLQQVRKL
GSFKSILGMIPGMAQHRKELEQFDEKGVDRTQAIIQSMTPEERRNPKIIDGSRRARIAYG
AGTTVSAVNGLLQRFEQAAKMMKRMTNGARSIPGMGGAGIGGKGKASKKGKKKKGSRSGN
PMKREAEEKALRDRLSGKGSTSSGSAFAKQPQAPQMPEGMPDLPPNLGGGLGGLFGAN
NT seq 1617 nt   +upstreamnt  +downstreamnt
atggcagctttttcatctttgaccgaccggctctcacaggccttcacccacctgcgttcc
aagggcaaactgaccgaggcggatatcgacgggaccatccgtgagattcgccgcgccctt
ctggatgccgatgtctccttggatgtggtgcgttccttcaccgcccgcatccgcgaacgg
gcactgggcgaagaggtctccaaggcgctgaaccccgctcagcaggtcgtctccatcgtg
tacgaggagctgacgggaatcctgggatccggggtggatcgacccctcaacttcgccaag
aacccgcccacggtcatcatgctcgccggccttcagggtgcaggcaagaccaccctggcg
gggaagctgggatactggctcaaggatgccggacacaccccgctcctggtggccgccgac
cttcagcgccccaatgccgtgacccagctccaggtggtcggcgaacgggccggggtgccc
gtctacgcccccgaacccggcgtgcagagcgagagctccgatgtggtctcccccggccag
gctcagggcgacccggtgcaggtagcccgcgactccgtccgactggcccaggagaagctc
tacgacgtggtcatcatcgatacggccggtcgtctgggcgtggaccaggagctgatggag
caggcacgcaatatccgcgatgccgtgaatcctgacgagatactcttcgtcatcgacgcc
atgatcggccaggatgcggtcgccacggccgaggccttcaacaagggggtcgacttcacc
ggagtcgtcctctcgaagttggatggcgatgcgcgtggcggtgccgccctgtccgtggcc
tcggtcaccggcaagcccatcctcttcgcctccaacggcgagggactgaaggacttcgag
gtcttccaccccgacaggatggcatcccgcatcctcgacatgggcgacatcctgaccctg
atcgagcaggcccagcgcgaattcgacgaggaggaggcccgcaaggcggccgggaagatg
tcggagggcagcttcggcctggacgacttccttgaacagctccagcaggtccgcaagctt
ggatccttcaagagcatcctgggcatgatcccgggtatggcccagcaccgcaaggaactg
gagcagttcgacgagaagggggtcgaccgcacccaggccatcatccagtccatgactccg
gaggagcgacgcaaccccaagatcatcgacggttccagaagggcccgcatagcctacggt
gcaggcaccacggtctcggccgtgaacggactcctgcaacgattcgagcaggccgccaag
atgatgaagaggatgaccaacggcgcccgttccatacccggcatgggtggagcaggcatc
ggaggcaagggcaaggccagcaagaagggcaagaaaaagaagggttcccggtccggtaat
cccatgaagcgtgaggccgaggagaaggccttgcgcgaccgcctgtcaggcaagggcagc
acatccagcggttccgccttcgccaagcagccccaggcccctcaaatgcccgaggggatg
cccgacctgccccccaacctgggtggcggactgggtgggctcttcggcgccaactaa

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