KEGG   Bifidobacterium indicum: BINDI_0221
Entry
BINDI_0221        CDS       T03564                                 
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
bii  Bifidobacterium indicum
Pathway
bii03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:bii00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    BINDI_0221
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bii03019]
    BINDI_0221
   03009 Ribosome biogenesis [BR:bii03009]
    BINDI_0221
   03036 Chromosome and associated proteins [BR:bii03036]
    BINDI_0221
Enzymes [BR:bii01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     BINDI_0221
Messenger RNA biogenesis [BR:bii03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BINDI_0221
Ribosome biogenesis [BR:bii03009]
 Eukaryotic type
  90S particles
   RNase
    BINDI_0221
 Prokaryotic type
  rRNA processing factors
   BINDI_0221
Chromosome and associated proteins [BR:bii03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     BINDI_0221
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DUF3239
Other DBs
NCBI-ProteinID: AIC91506
UniProt: A0A087VT43
LinkDB
Position
complement(350995..351819)
AA seq 274 aa
MDRDTDKVAGKDGNPGSTQAPTVRVSAETAQEADLPARELFTALHAELTPELLIHALTHR
SFAHEHPGMPNNERLEFLGDAVLELVATETLYKAHPDQSEGQLAKMRAKAVSEESLSAIA
RTKLHLGPYILLGRGEAENGGADKDSILCDTVESLIGSVFVEHGIDGARVTVHALLDDTL
EEVATEGPALDWKTSVTVKAHRLGLGDPHYAMAVSGPEFAQVFTARLTLGDGDTVIGTAD
ASSKRKAQLAAAAQGWKALDDPEVLASLQAEEAK
NT seq 825 nt   +upstreamnt  +downstreamnt
atggatagggatacagacaaggttgcaggcaaggacgggaatccgggttccacccaggcc
ccgacggtacgggtatccgcggaaaccgcccaggaagcggacctgccggccagggaactc
ttcacggccctgcatgccgaactgacccccgaacttctgatccatgcgctgacgcaccgg
tccttcgcgcatgagcaccccggcatgcccaacaacgaacggctggagttcctgggcgac
gccgtactggagctggtggccaccgagaccctctacaaggcacaccccgaccagagcgag
ggccagctggccaagatgagggccaaggccgtttcggaggaatccctctcggccatcgcc
cggaccaaactccacctgggaccgtacatccttctgggccggggtgaagccgaaaacggc
ggggctgacaaggactccatcctgtgcgacacggtcgagtccctgattgggtccgtcttc
gtggagcatggaatcgacggggcccgcgtcacggtccacgccctccttgatgacaccctg
gaggaggtggccacggagggccctgccctggactggaagacctccgtcaccgtcaaggcc
caccgactgggactcggcgacccccactacgccatggccgtctccggaccggaattcgca
caggtcttcacggcgcgactgaccctgggagacggcgacacggtgattggcaccgccgat
gccagcagcaagcgtaaggcccagctggccgccgccgcccaggggtggaaggccctggat
gatccggaggtcctggcctccctccaggccgaggaagcaaaatag

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