Bifidobacterium indicum: BINDI_0221
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Entry
BINDI_0221 CDS
T03564
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
bii
Bifidobacterium indicum
Pathway
bii03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bii00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
BINDI_0221
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bii03019
]
BINDI_0221
03009 Ribosome biogenesis [BR:
bii03009
]
BINDI_0221
03036 Chromosome and associated proteins [BR:
bii03036
]
BINDI_0221
Enzymes [BR:
bii01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
BINDI_0221
Messenger RNA biogenesis [BR:
bii03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BINDI_0221
Ribosome biogenesis [BR:
bii03009
]
Eukaryotic type
90S particles
RNase
BINDI_0221
Prokaryotic type
rRNA processing factors
BINDI_0221
Chromosome and associated proteins [BR:
bii03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
BINDI_0221
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DUF3239
Motif
Other DBs
NCBI-ProteinID:
AIC91506
UniProt:
A0A087VT43
LinkDB
All DBs
Position
complement(350995..351819)
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AA seq
274 aa
AA seq
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MDRDTDKVAGKDGNPGSTQAPTVRVSAETAQEADLPARELFTALHAELTPELLIHALTHR
SFAHEHPGMPNNERLEFLGDAVLELVATETLYKAHPDQSEGQLAKMRAKAVSEESLSAIA
RTKLHLGPYILLGRGEAENGGADKDSILCDTVESLIGSVFVEHGIDGARVTVHALLDDTL
EEVATEGPALDWKTSVTVKAHRLGLGDPHYAMAVSGPEFAQVFTARLTLGDGDTVIGTAD
ASSKRKAQLAAAAQGWKALDDPEVLASLQAEEAK
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggatagggatacagacaaggttgcaggcaaggacgggaatccgggttccacccaggcc
ccgacggtacgggtatccgcggaaaccgcccaggaagcggacctgccggccagggaactc
ttcacggccctgcatgccgaactgacccccgaacttctgatccatgcgctgacgcaccgg
tccttcgcgcatgagcaccccggcatgcccaacaacgaacggctggagttcctgggcgac
gccgtactggagctggtggccaccgagaccctctacaaggcacaccccgaccagagcgag
ggccagctggccaagatgagggccaaggccgtttcggaggaatccctctcggccatcgcc
cggaccaaactccacctgggaccgtacatccttctgggccggggtgaagccgaaaacggc
ggggctgacaaggactccatcctgtgcgacacggtcgagtccctgattgggtccgtcttc
gtggagcatggaatcgacggggcccgcgtcacggtccacgccctccttgatgacaccctg
gaggaggtggccacggagggccctgccctggactggaagacctccgtcaccgtcaaggcc
caccgactgggactcggcgacccccactacgccatggccgtctccggaccggaattcgca
caggtcttcacggcgcgactgaccctgggagacggcgacacggtgattggcaccgccgat
gccagcagcaagcgtaaggcccagctggccgccgccgcccaggggtggaaggccctggat
gatccggaggtcctggcctccctccaggccgaggaagcaaaatag
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integrated database retrieval system