Bifidobacterium indicum: BINDI_0397
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Entry
BINDI_0397 CDS
T03564
Name
(GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
bii
Bifidobacterium indicum
Pathway
bii00300
Lysine biosynthesis
bii00550
Peptidoglycan biosynthesis
bii01100
Metabolic pathways
bii01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
bii00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BINDI_0397
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BINDI_0397
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
BINDI_0397
Enzymes [BR:
bii01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
BINDI_0397
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
DUF2428
CbiA
UDPG_MGDP_dh
Motif
Other DBs
NCBI-ProteinID:
AIC91678
UniProt:
A0A087VTM1
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All DBs
Position
586067..587554
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AA seq
495 aa
AA seq
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MPMTLQEVARSVSGRLIPVEGSEPIEGGAAQSVSLRVVSDSRQAGEGSLFVAIHGERVDG
HDFLPGMGARGVCAALVDHPVSGADLPQILVDDTIEALGLLAKRNIELRRAAGTDFTVIG
ITGSVGKTTTKDLLASLLSALGTVVAPVGSFNNEIGLPLTALQVGEGTRFLVAEMGANHI
GEIAHLTRIVPPDLALVLKVGVAHLGEFGSVDRIAQAKSEMVQGLVPGGLAVLNADDSRV
AAMAPLSPGGVLRFGMNEESSDLDARATDVVRDGLDRPSFTLTFAGADPVRVHLGISGMH
NVMNALAAAAVAHHLGLDPDAIAEGLGRDARISPHRMAVGTVWTDRAGFTLIDDSFNANP
DSMRAGLDALSTWQGAGNQGKPYRVAVLGVMLELGDQSAQLHEQIGAYCRRIDLDALVAV
GCDDASANDLVRAMVRGAGGETGGSDVPMRVIYTPDANRAGETVEGLAAEHPGALVLLKG
SHMSGLSALADRWQG
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgcccatgaccctgcaggaggtagctcggagtgtgtcgggccgtctgattcccgtcgaa
ggttcggagccgattgaaggtggcgccgcccagtccgtatcgctccgggtggtctcagat
tcacggcaggcaggggagggctccctctttgtggccatccatggagaacgggtggacggg
catgatttcctgcccgggatgggtgcccgtggagtgtgcgccgccctggtggaccacccg
gtttccggggctgacctgccgcagattctggtggatgacaccatcgaggctctggggctc
ctggccaagcgcaatattgaactgcgccgggcggcgggtactgatttcacggtcatcggc
atcaccggttctgtcggtaagaccacgaccaaggacctcctggcctccctgctgtcagca
ctggggacggtcgtggctccggtcggttccttcaataatgagataggactgccgctgaca
gccctgcaggtgggtgaggggacgcggttcctggtggccgagatgggggccaaccatatt
ggtgagatagcacatctgaccaggattgttccccctgacctggccctggtcctcaaggtg
ggtgtggcccacctgggcgagttcggctcggtggaccgcatagcccaggccaaaagcgag
atggtccaaggactggtccctggagggctggccgtgctcaacgccgacgattcacgtgtt
gctgccatggcgcctctctctccgggcggtgtcctcaggtttggcatgaacgaggagtcg
tctgatttggatgcccgtgcgaccgatgtggtcagggatggcctggaccgcccctctttc
acgctgaccttcgccggagccgatcctgtccgcgtccacctgggcatatcgggcatgcac
aatgtgatgaacgccctggctgcggctgcggtagcccatcatctgggtctggaccccgat
gccattgccgagggtctgggccgggatgccaggatcagcccacaccgcatggctgtggga
acagtatggaccgacagggcgggattcaccctgattgatgactccttcaacgccaatccc
gattccatgcgggccgggctggatgccctgtccacctggcagggagccgggaaccagggc
aaaccctaccgggtcgcggtcctgggcgtcatgctggaactcggtgaccagtcggcgcaa
ctgcatgagcagatcggtgcttactgccgtcggatcgatctggatgccctggttgccgtg
ggctgtgatgatgcatcagcaaacgacctggttcgagccatggttcggggggccggcgga
gagaccggggggtccgatgtgcccatgcgggtcatctatacgcccgatgcgaaccgggcc
ggagagacggtagagggtctggccgcagagcatcccggagccctggtccttttgaagggg
tcgcacatgtccggcctttcggccctggcagacaggtggcagggctga
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