Bifidobacterium indicum: BINDI_0418
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Entry
BINDI_0418 CDS
T03564
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bii
Bifidobacterium indicum
Pathway
bii03030
DNA replication
bii03430
Mismatch repair
bii03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BINDI_0418
03430 Mismatch repair
BINDI_0418
03440 Homologous recombination
BINDI_0418
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bii03032
]
BINDI_0418
03400 DNA repair and recombination proteins [BR:
bii03400
]
BINDI_0418
Enzymes [BR:
bii01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BINDI_0418
DNA replication proteins [BR:
bii03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BINDI_0418
DNA repair and recombination proteins [BR:
bii03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BINDI_0418
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DUF6270
Motif
Other DBs
NCBI-ProteinID:
AIC91699
UniProt:
A0A087VTN5
LinkDB
All DBs
Position
complement(615436..616191)
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AA seq
251 aa
AA seq
DB search
MSTVLTALHEALDSAPEQDMTTRLDQSWLLGFDTETTGTSPNRDNIVSASLVLRNPRTGY
EGDAVAEWIINPGRHISEGASRVNGFTDEYLAANGSEPAESIEQIAGLIMTAQSKHIPLL
AYNAPFDVRMLNGDIRQWCSGRMEPMPERELLVVDPLVIDRAISHRSGRRTLTYTTEYYG
VVPHGDFHDATTDTVASVDLIEPMTTLYPQVGSITLGKLMDWQRDAHRTWLEQFNEWLAS
KGSRPAIDTWF
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgttcttacagccttgcacgaagcgcttgactccgcgcctgaacaggatatg
acgaccaggcttgaccagtcctggctcctgggtttcgacacggagaccacgggcaccagc
cccaatcgggacaacatcgtatcggccagcctggtactgcgtaacccccgaacagggtat
gagggtgatgccgtggccgagtggatcatcaacccaggccggcatatcagcgagggagcc
agccgggtcaatggcttcaccgacgagtacctggccgcgaacggaagtgaacccgccgag
tcgatagagcagatcgccgggttgatcatgacggcccagagcaagcacataccgctcctg
gcctacaatgcccccttcgatgtacgtatgctcaacggcgacattcgccaatggtgctca
ggcaggatggaaccaatgcccgagagggagctcctggtggtcgatccgctggtcatcgac
agggccatttcgcaccgctccgggcggcggaccctgacctatacgaccgaatactacggg
gtcgttcctcatggggatttccacgacgcaaccaccgacacggtggcctcggtggatctg
atcgagcctatgacgaccctttatccgcaggtaggcagcatcaccctgggcaagctcatg
gactggcagcgtgatgcgcacagaacctggctggagcagttcaacgaatggctcgcctca
aagggaagccgcccggcaatcgatacctggttctga
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integrated database retrieval system
