Bifidobacterium indicum: BINDI_0485
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Entry
BINDI_0485 CDS
T03564
Name
(GenBank) probably bifunctional short chain isoprenyl diphosphate synthase
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
bii
Bifidobacterium indicum
Pathway
bii00900
Terpenoid backbone biosynthesis
bii01100
Metabolic pathways
bii01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
bii00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
BINDI_0485
09110 Biosynthesis of other secondary metabolites
00997 Biosynthesis of various other secondary metabolites
BINDI_0485
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
bii01006
]
BINDI_0485
Enzymes [BR:
bii01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
BINDI_0485
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
BINDI_0485
2.5.1.29 geranylgeranyl diphosphate synthase
BINDI_0485
Prenyltransferases [BR:
bii01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
BINDI_0485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
AIC91765
UniProt:
A0A087VTP5
LinkDB
All DBs
Position
complement(695529..696770)
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AA seq
413 aa
AA seq
DB search
MGTSADRLISMETLTPETIEQRMSELVEACRQDHLGEPETGADGIPTPIQALNAVWDEAG
RAGRGGKRLRALLLWDTYRAIGAGEENTDQAVIDLACALEVYQTSALVHDDIIDNSPLRR
GKPSSHMVLSNLTGPEENPERTDLGNPMRQDHLGAGRSSEATAARGRGLGILLGDLLSTS
SSDLVSRASASLPSGESILRTFLGMQTAVETGQVLDMGMEIMPLDDPEQLRREAFRTMGW
KTASYTTMTPLALGLMAGGIDPDRTRALAYDLGLHLGLLFQLRDDLLDVEGRSGQTGKPQ
GGDILEGKRTVLLADTLSMASQDEAERLRAAYRAPQRTPDQVAWVRRLMETSGAVEKSRN
RMDRLTSSVYEEIANLCQELSLDDRQGSIIERACRRFMPDAATPGYHRHGIDG
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggggacgtctgcggataggctcatatccatggaaaccctcacacctgagaccatcgaa
cagcggatgagcgaactggtcgaggcctgtcggcaggaccacctcggcgagccggaaacg
ggcgcagacggcatcccgaccccgatacaggccttgaatgccgtgtgggacgaggccggc
cgggcgggccggggcggcaaacgactgagggcactcctgctctgggacacctatcgggcg
atcggagcaggcgaagagaacaccgaccaggcagtcatcgatctggcctgcgcgctggag
gtctaccagaccagtgccctggtccatgacgacatcatcgacaactccccccttcgccgc
ggcaaaccgtcctcccatatggtcctgtcgaacctgacaggccccgaggagaaccctgaa
cgaacagacctcggaaatcccatgcgtcaggaccacctcggtgccggtcgaagttcagaa
gcgacagcagccagggggcgtgggctgggcatccttctgggagacctgctgtccacctcc
agctccgatctggtctccagggcgtccgcctccctcccatcgggcgagagcatcctccgg
accttcctcggcatgcagaccgctgtggaaaccgggcaggtcctcgatatgggcatggaa
atcatgcccttggatgatcccgaacagctgcgtcgtgaggcattcaggaccatgggatgg
aaaacagcctcctatacgaccatgacaccccttgccctgggactgatggcaggcggcatc
gacccggaccgcacccgtgccctggcctatgatctcggcctccatctcggcctcctcttc
cagttgcgagacgacctcctcgatgtggagggccgcagcggtcaaaccggcaaaccccag
ggaggggacattctggaggggaagcggaccgtgctccttgccgataccctctcaatggcc
tctcaggatgaggccgaaaggctcagggcggcctacagggcaccccaacgcacaccggat
caggtggcatgggtccgacgcctgatggagaccagcggggctgtggagaaaagccggaac
cgtatggatcgtctgaccagttcggtctatgaggaaatagccaacctgtgccaagagttg
tcactggatgacaggcagggctccatcatcgagcgggcctgccgccgtttcatgcccgat
gccgcgactcccgggtatcataggcatggaattgacggataa
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