Bifidobacterium indicum: BINDI_0489
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Entry
BINDI_0489 CDS
T03564
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
bii
Bifidobacterium indicum
Brite
KEGG Orthology (KO) [BR:
bii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bii03032
]
BINDI_0489
03400 DNA repair and recombination proteins [BR:
bii03400
]
BINDI_0489
Enzymes [BR:
bii01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BINDI_0489
DNA replication proteins [BR:
bii03032
]
Prokaryotic type
DNA Topoisomerases
BINDI_0489
DNA repair and recombination proteins [BR:
bii03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BINDI_0489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Inp1
Motif
Other DBs
NCBI-ProteinID:
AIC91769
UniProt:
A0A087VTW9
LinkDB
All DBs
Position
complement(702159..704777)
Genome browser
AA seq
872 aa
AA seq
DB search
MARQRRSKAAGYDPREVKENIVETPLNEEMSKSFLEYAYSVIYARALPDARDGLKPVQRR
IIYQMGQMNLTPDRPYMKSARAVGEVMGKLHPHGDSSIYEAMVRLAQPFAMRLPLVDGHG
NFGSLDDGPAASRYTEARLAPAALGMNADIDQDTVDFSPNYDNKLKEPVVLPSAIPNLLV
NGASGIAVGMATNMVTHNLGEVVAAAKYLMGHPDAGLDDLMRYVPGPDLPGGGVIVGRDG
IRQAYAKGRGAFVTRSVTHVENVTARKKAIVVTELPFMVGPERVLERIGEGVKNHKLEGI
SSAIDLTDRHNGTRIVIEIKTGFDPGKVLGKLFKYTPLEDSFTINNVALVSGRPHTMGLK
ELLEVWIEHRRTVIRRRSEFRKTKAKERLHLVEGMLLALVDIDEVIQVIRTSENADEAKN
RLMAVFDLDQIQAQYILDLRLRRLTRMSRIELESERDDLRRQLDELEGILSSSAALDRVV
IDEMDKAVEEWGSPRRTVILDQEPSGELAPVTAQEDEESAQRLAKATRALAAAGEPGKSG
AGAGADLQLEDQPCTVMMSATGLLARSTAGALDVWKGRSNADGRAADDQILSIFPTTTLS
SYGLITSAGRLVTAQVADLPLIPATASLSLTGGVHGSELLNGTQSTDPTPGEEAITVVDL
KDTTPLAIGTRNGIVKRWNREAPTTMDSWPIIDLKDGDEVVFASPCADKDRLVFIASDAS
LLTFPAEKVRPQGRNAGGMAGIRLNEGCRVTTFAVVPVGGLAWTYEETDTGLTSQSGAVV
LTVAGDSEALPGTENGAAKVTPLEMYPIKGRGTGGVRSQRFLKGQDTLLTAFVGSWPLRA
STAAGTPVELPEVDMRRDASGQELAAPIAYVA
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atggcaaggcaacgcaggagcaaggctgccgggtacgacccccgggaggtcaaggaaaac
atcgtcgagacccctctgaacgaggagatgagcaagtccttcctggagtatgcctactcc
gtcatctacgccagggccctccccgacgcccgcgacggcctcaagccggtgcagcgcagg
atcatctatcaaatggggcagatgaacctgacccctgaccggccctacatgaagtccgcc
cgtgccgtgggcgaggtcatgggcaagctccacccccatggcgactcctccatctacgag
gccatggtccgtctggcccagcccttcgccatgcgtctgcccctggttgatggccatggc
aacttcggatcgctggatgatggtccggcagcctcccgatacaccgaagcacgcctggcc
ccggccgcgctgggcatgaacgccgacattgaccaggacaccgtcgacttcagccccaac
tacgacaacaagctgaaggaaccggttgtcctcccctcggccatacccaacctcctggtc
aacggggcctccggcatcgccgtgggcatggccaccaatatggtcacccacaacctgggc
gaggtcgtggcggccgccaagtacctgatgggtcacccagacgccggccttgatgatctg
atgcgttatgtccccggtcccgaccttcccggcgggggtgtcatagtaggacgtgacggg
attcgccaggcctatgccaagggccgcggcgccttcgtgacccgatcggtgacccatgtt
gaaaacgtcaccgcccggaagaaggccatcgtcgtcacggaactccccttcatggtcggc
cctgaacgtgtcctggaacggatcggcgagggggtcaagaaccacaagctggaggggatt
tccagcgccatcgatctgacagaccgccacaacggcacccgtatcgtcatcgagatcaag
acagggttcgacccgggcaaggtcctgggcaagctcttcaaatacacaccgcttgaggat
tcgttcaccatcaacaacgtggccctggtgagcgggcggccccacaccatgggactcaag
gagcttcttgaggtctggatcgaacatcgacgtacggtaatcagacggcgcagcgaattc
cgcaaaaccaaggccaaggaacgcctccacctggtcgagggcatgctcctggctctggtc
gacatcgacgaggtcatccaggtcatccgcacctcagaaaacgccgatgaagccaaaaac
cggctcatggcggtattcgacctggatcagatccaggcccagtacatcctcgaccttcgt
ctgcgccgcctgaccaggatgagccggattgagctggaaagcgaaagggacgacctgcgc
cgccagctggatgaactggaaggcatcctgtcctcaagcgccgccctggacagggtggtg
attgatgagatggacaaggccgttgaggagtggggcagcccccggcggaccgtgatcctg
gaccaggagccttcgggcgagttggccccggtcaccgcccaagaggatgaggagagcgcc
cagagactggccaaggccaccagggcccttgctgcggcaggagaacccggcaagagtggt
gccggagcaggtgccgacctccagcttgaggaccagccctgtaccgtcatgatgagcgcg
accggtcttctggcccggagcacggctggtgccctggatgtctggaagggcaggagcaac
gcggacgggcgggcggccgatgatcagatactctccatcttccccaccacgactctttcc
tcctacggactgatcacctccgccggccgtctggtcacggcccaggtggcagacctcccc
ctgataccggccacagccagtctcagcctgacagggggtgtccacgggagcgagctcctg
aacgggacccagagtaccgaccccacgcccggggaggaggccataacggtcgtcgacctc
aaggacaccactcccctggccatcggaaccaggaacggcatcgtgaagcggtggaaccgt
gaggcgccaacaaccatggactcctggcccatcattgatctgaaggatggcgacgaggtg
gtcttcgcctctccttgcgcagacaaggaccgactggtcttcatcgcttccgatgccagc
ctcctcaccttcccggccgagaaggtccgcccacagggacggaacgccggaggcatggcg
ggaatcaggctgaacgagggatgccgggtcaccacattcgccgtggtaccggtcggtgga
ctggcctggacctacgaggagacggataccggcctgacctcccagtccggtgccgtggtc
ctgaccgtggccggtgattccgaggccctgccggggaccgagaacggtgccgccaaagtg
acacccctggagatgtaccccatcaagggacgaggcactggcggagtgcgttcccaacgc
ttcctgaaggggcaggacaccctcctgacggcatttgtgggttcctggccgcttcgagcc
tccacggccgctggcacccccgtagaactccccgaagtggatatgcgcagggatgcctcc
ggtcaggaactggccgcacccattgcctacgtggcctga
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