Bifidobacterium indicum: BINDI_0583
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Entry
BINDI_0583 CDS
T03564
Name
(GenBank) helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
bii
Bifidobacterium indicum
Brite
KEGG Orthology (KO) [BR:
bii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bii03019
]
BINDI_0583
Enzymes [BR:
bii01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BINDI_0583
Messenger RNA biogenesis [BR:
bii03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BINDI_0583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
DEXQc_Suv3
Helicase_C
AAA_22
nSTAND3
MTR4-like_stalk
TetR_C_41
DUF6237
Motif
Other DBs
NCBI-ProteinID:
AIC91861
UniProt:
A0A087VU54
LinkDB
All DBs
Position
complement(804959..807529)
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AA seq
856 aa
AA seq
DB search
MSDRHQDSQESDQTLSPSQRYARFSKRRKRITGASGRFQNMQPFALDGFQVEAIEALEDG
QNVLVAAPTGAGKTIVADFAVFLAHEQNVKTFYTTPIKALSNQKYHDLVARYGEDHVGLL
TGDTSINSEADIVVMTTEVLRNMLYERSSTLSALRYVVLDEVHFLADKFRGPVWEEVIIH
LPSSTRIVGLSATVSNVEDFSDWISSVRGKTKLVVSERRPVPLEQHVLVQADRHTEPEII
DLYRHDGSGRQTNKINHGLINRLSQLKRQGEFRRSARGQAGNHRHGRHGRGGEGAQSRRQ
GERYRPSRAAVVDELDFMDMLPGIYFIFSRTGCDQAVQQCTRAGLQLTTDTEARRIRQIV
DSMAEGQLSRDDLKALGFAQFRFALEQGFAAHHAGVVTLFRQIVEHLFELGLVKVVFATE
TLALGINMPARCVVVEKLEKFDGTGHVGLTPGEFTQLTGRAGRRGIDDIGHVVVVDHRDF
SPETMAALSSKRVYPLHSSFKPTFNMAVNLLNSSTYDRARKTLDHSFAQWEANRSSSELE
ARIQTLTEALDGYREAAQCSHGDLIEFMEIRADLSSAQKNERRQLKKQRFSNERERTQAF
RSLDERIEQLREKERNHPCRQCPDLPRHMRWGNRWIREHKELQKAEDRYESRTGSVSRQF
DRICTILTDLGYIRQIDLEDYQLTRRGQLLRRIYSEQDLTLAQILDKGILDDLEPEELAA
AVSGLVYESRRGVADRDDSRRQSAPLAGAIASMNREWELVRDECEDAGLDLPGELDFGLG
RTVYDWACGDSLATILKDTDLTAGDFVRNAKRLSDVLTQIVQVEPFLGSGGHSLALRARM
AADQVNRGIVAYTGVE
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatcgccatcaggacagtcaggaatctgaccagacgctcagcccatcgcagcgg
tatgccaggttcagcaagcgccgtaagcgtataaccggagcctcgggacgcttccagaac
atgcagcctttcgctctggacgggttccaggtcgaggcgattgaagccctggaggacggc
cagaacgtcctggtcgcggctccgacaggggccggcaagaccatcgtggctgattttgcc
gtcttcctggcccacgagcagaacgtcaagaccttttacaccacacccatcaaggctctg
agcaaccagaagtaccacgacctggtggcccggtacggtgaagaccatgtaggactgctg
accggcgacacctcgatcaactccgaggcagacatcgtcgtcatgaccaccgaggtcctg
cgcaacatgctctacgagcgttcatccaccctctcggccctgagatacgtggttctggac
gaggttcacttcctggccgacaagttcagggggccggtctgggaggaggtcatcatccac
ctgcccagctccacccgaattgtcggactctcggctacggtctcgaacgtggaggacttc
tcggactggatttcgtcggtccgaggcaagaccaagctggtggtctcggagcgacgtccg
gtgcctctggagcagcatgtcctggttcaggcagacagacacaccgagcctgaaatcatc
gacctgtatcgacatgatggctccggacgacaaacaaacaaaatcaaccacggtctcatt
aaccgattgtcgcagctcaaaaggcagggtgagttccgtaggagcgcgcggggtcaggcc
ggtaatcatcggcatggtcgccatggccgcgggggagagggggcccagagccgccgtcag
ggtgagcggtaccgtcccagccgtgcggctgttgttgacgagctggatttcatggatatg
ctgccgggaatctacttcatcttctcccgtaccggctgtgaccaggccgttcagcaatgc
acgcgtgcaggtctgcaactgaccaccgacaccgaggcacgtagaattcgtcagattgtc
gactccatggccgaaggtcagctgagccgcgatgatttgaaagctctgggtttcgctcag
ttcagattcgccctggagcagggcttcgccgcccaccatgccggggtggtgaccctcttc
cgccagatagtcgaacacctgttcgaactgggattggtcaaggtcgtgtttgcaaccgaa
accctggctctgggcatcaacatgcccgctcgctgtgtggtggtcgagaagctcgagaag
ttcgacgggaccgggcacgtcggtctgaccccgggggagttcacccagttgacagggcgc
gccggacgtcgcggcatcgacgatatcggtcacgtggtggtcgtggatcatcgggacttc
agccccgaaacaatggcggccctatccagcaagcgcgtctacccgctgcactccagcttc
aaacccaccttcaacatggcggtcaacctgctgaacagcagcacctacgacagggcccgc
aagaccctggaccattcctttgcccagtgggaggcgaacaggtcgtcctccgagcttgaa
gccaggatacagaccctgaccgaagccctggatggatatcgtgaagcggctcagtgcagt
cacggagacctgattgagttcatggaaatccgtgccgatctctcctccgctcagaagaac
gagcgccgccagctgaagaagcaacgtttcagcaatgagcgagagcgtacccaagccttc
aggagcctggacgaacgcatcgagcagcttcgcgaaaaggagcgcaaccatccctgcagg
caatgcccggaccttccccgtcatatgcggtgggggaatcgctggatccgtgagcacaag
gaacttcagaaggccgaggacaggtacgagtcgcgcaccggttcggtctcgaggcaattc
gaccggatatgcaccatcctgaccgacctgggatacatccgacagatcgatctggaggat
taccaactgacccggcgcgggcaacttcttcgacgaatctacagcgagcaggacctgacc
ctggcccagattctggacaagggaatactggacgacctggagccggaagagcttgccgcg
gccgtgtccggcttggtctatgaatcacgtaggggagtcgcggacagggatgattcaagg
cggcaatccgccccgctggcaggtgccattgccagcatgaaccgagagtgggaactggtg
cgggatgagtgtgaagatgcaggtctggatcttcctggtgagctggatttcggcctggga
agaacggtctacgactgggcctgcggggattccctggcaaccatcctcaaggacacggac
ctcacagccggggatttcgtccggaatgccaagcgcctttcggatgttctgacccagatt
gtccaggttgagcccttcctggggtcaggtggccacagcctggcactccgggcaagaatg
gcagccgaccaggtcaatcgcggtatcgtggcctatacgggtgtggagtag
DBGET
integrated database retrieval system
