Bifidobacterium indicum: BINDI_0891
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Entry
BINDI_0891 CDS
T03564
Name
(GenBank) carbamoyl-phosphate synthase, large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
bii
Bifidobacterium indicum
Pathway
bii00220
Arginine biosynthesis
bii00240
Pyrimidine metabolism
bii00250
Alanine, aspartate and glutamate metabolism
bii01100
Metabolic pathways
bii01110
Biosynthesis of secondary metabolites
bii01240
Biosynthesis of cofactors
Module
bii_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
bii00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
BINDI_0891
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
BINDI_0891
00220 Arginine biosynthesis
BINDI_0891
Enzymes [BR:
bii01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
BINDI_0891
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_4
ATPgrasp_Ter
GARS_A
ATP-grasp_3
ATP-grasp_2
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
AIC92157
UniProt:
A0A087VUX5
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Position
complement(1177856..1181236)
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AA seq
1126 aa
AA seq
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MPKRQDIHSVMVIGSGPIVIGQAAEFDYSGTQACRVLREEGIRVILVNSNPATIMTDPEM
ADATYIEPISVPFLERIIAKEKPDAILPTLGGQTALNAAEALGKAGVLEKYDVELIGASL
EAIDRGEDRELFKKVVDEAGAESARSRIIHTLDEADAVADELGYPLVVRPSFTMGGLGSG
IAHDQEELHRIAGAGIHYSPTDEVLLEEGIEGWKEYELELMRDRNDNVVVVCPIENVDPV
GVHTGDSITVAPAFTLTDREYQKMRDIGIAIIRGVGVDTGGCNIQFAVNPDNGRIIVIEM
NPRVSRSSALASKATGFPIAKIATKLALGYTLDEIENDITRSTPASFEPTIDYVVTKIPR
FAFEKFPGADTTLTTSMKSVGEAMALAGNFQESLGKAMRSIDKRHMTFDWDGPRPDQTEV
DRLLELMHTPTEHRYLQIQRALWGGASIDQIFEATKIDRWFLEQFSLINQLAMEIRGSEF
LDDDLLRRAKQAGLSDLQISHLRGLGDQGESVIRELRGAFGIHPVYKTVDTCAAEFDAAT
PYYYSCYADESELRPRDREAVIILGSGPNRIGQGIEFDYTCVHAVQELGKDYDTIMVNCN
PETVSTDYDMSDRLYFEPLTFEDVLEIYQAEKKMGPVKGVIVQLGGQTPLSLAARLKAAG
VPILGTSPESIDLAENRELFGEVLKKEHLNAPRYGTALSLEEAQEAAHGIGYPVLVRPSY
VLGGRGMEIVYDDDQLEKYVDRALQEAKADTVVSGRLPSPLLIDKFLQDAIEVDVDALYD
GSDLYIGGIMEHVEEAGVHSGDAACTLPPSTLSDDQIERLRQATKAIAEGCGVRGLINVQ
YAFMANTLYVIEANPRASRTVPFASKATGTALAKAAARIMVGETIAQQRANGLLLPIQDG
GTVRVGQPVAVKESVLPFKRFRTPVGRTVDILLGPEMRSTGEVMGFDRDFPHAFAKSQSA
AYEGGLPTSGVVFLSVNDSDKRQLPILAARLQEQGFTICATEGTASVLRRYGIDVAVVDK
ITAGSADQASGPGEDDGVRRMGGNPVQLIEEGRIDMILNTPSSRDSRSDGYLIRVSAIAA
DIPQFTTITEFSAALMAIDAVKTGDYEVLSIQEHAQRLLELEGLGR
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagcggcaggacatccattcggtcatggtcatcggctccggccccatcgtcatc
ggtcaggctgccgaattcgattactcgggaacccaggcttgccgggtcctcagggaggag
ggaatcagggtaatcctggtcaactccaacccagccaccatcatgacggatcccgagatg
gccgatgccacctacatcgagcccatctccgttcccttcctggagcgcatcatcgccaag
gagaagcccgatgccatcctgcccacgctgggcgggcagacggccctgaacgctgctgaa
gccctgggcaaggccggtgtgttggagaagtacgacgttgagctgatcggtgcctccctt
gaggccatcgacaggggagaagacagggagctcttcaagaaggttgtggacgaggccggt
gccgagtccgccaggtcccgaatcatccacaccctggatgaggctgatgccgtggccgat
gaactcggctaccccctggtggtgcgtccctccttcaccatgggtggtctgggatccggc
atcgcacatgaccaggaggagcttcaccgaattgccggtgcaggcatccactattcgccc
accgatgaggtcctgcttgaggagggcatcgaggggtggaaggagtatgagctggagctc
atgcgcgaccgcaatgacaatgtggtcgtggtctgccccatcgagaacgtcgacccggtc
ggtgttcatacgggcgactccatcaccgtggctcctgctttcaccctgacggaccgtgag
tatcagaagatgcgtgacatcggcatcgccatcatccgtggtgtgggtgtcgataccggt
ggctgcaacatccagttcgccgtcaatcccgacaatgggcgcatcatcgtcatcgagatg
aatcctcgcgtttcgcggtcctcggccctggcctccaaggcgaccgggttccccatcgcc
aagattgcgaccaagctggccctgggctataccctggatgaaatcgagaacgacatcacc
aggtcgaccccggcctccttcgagccgaccatcgactacgtggtgaccaagattccgcgc
tttgccttcgagaagttccccggtgcagacaccaccctgaccacctccatgaagtctgtg
ggcgaggccatggccctggccggcaacttccaggaatccctgggtaaggccatgcggtcc
atcgacaagcggcatatgaccttcgactgggacggtccacgccccgaccagaccgaggtg
gaccgcctccttgagctcatgcacactcccacggagcatcgctatctgcagatccagcgg
gcgctctggggtggggccagcatagatcagatattcgaggccaccaagatcgaccgctgg
ttcctggagcagttcagcctgatcaatcagctcgccatggagatccgtggcagtgagttc
ctcgatgatgatctcctgcgccgggccaagcaggcagggctgagcgacctgcagatatcc
catctgcgtggtctgggagaccagggggagtccgtcatccgcgagttgcgcggtgccttc
ggcatccacccggtctataagaccgtcgacacctgcgcggccgagttcgatgcggcaacc
ccctactactactcctgctatgccgatgagtccgagctgaggcccagggaccgtgaggcg
gtcatcatcctgggttccggtccgaacaggattggacagggcatcgaattcgactacacc
tgcgtccacgcggtccaggaactgggcaaggactatgacaccatcatggtcaattgcaac
cccgagaccgtctccaccgactacgacatgtctgacaggctctacttcgagcccctgacc
ttcgaggatgtactggagatataccaggccgagaagaagatgggcccggtcaagggtgtc
atcgtccagctgggcggccagaccccgctctccctggcggccaggctgaaggctgctggt
gtgcccatcctgggtaccagtcccgagtcgatcgacctggcggagaaccgcgagctcttc
ggcgaggttctgaagaaggaacatctgaacgcacccaggtatggcacggccctctccctg
gaggaggcccaggaagcggcacatggcatcggatatccggtactggtcagaccctcctat
gtgctgggaggcagaggcatggagatcgtctatgacgatgaccagctggagaaatatgtt
gacagggccctacaggaagccaaggccgatacggtggtctccggccgcctgccctcaccc
ctcctgatcgacaagttccttcaggatgccatcgaggttgatgtcgatgctttatacgac
ggtagcgatctgtatatcggcggcatcatggaacacgtggaggaggccggggtccattcc
ggtgatgctgcttgcaccctgcccccgtccaccctctccgacgaccagatcgagcgactt
cgacaggccaccaaggccattgccgagggctgtggggtccggggcctgatcaacgtgcag
tacgccttcatggccaacaccctctacgtcatcgaggccaatccccgagcctcccgcacc
gtccccttcgcctccaaggccactggcaccgccctggccaaggcggcggcccggatcatg
gtgggggagaccatagctcagcagcgggccaacggtctcctcctgcccatccaggacggg
ggtacggtccgggtcgggcagccggtggcggtcaaggaatcggtcctgcccttcaagcgc
ttcaggacaccggtcggtaggacggttgacatcctcctggggcccgagatgcgttccacc
ggtgaggtcatgggcttcgacagggacttcccccacgccttcgccaagagccagtcggct
gcttacgagggcggtctgcccacctccggggtggtcttcctctcggtcaatgactcggac
aagcgccagctgcccatactggccgcccgactccaggaacagggcttcaccatctgcgcc
accgagggaacggcatccgtcctgcgcaggtacgggattgatgtggccgtggtggacaag
atcaccgcaggttctgccgaccaggcatccggccccggtgaggatgatggtgtcaggcgc
atgggaggaaaccccgtccagctgattgaggaggggcggattgacatgattctcaacacc
ccgagttccagggattcccgctccgacggttatctgatacgagtctcggccatcgcggcg
gatattccccagttcacgaccatcaccgagttctctgccgccttgatggccatcgatgcc
gtcaagacgggcgactacgaggtgctgagcatccaggaacacgcccagcgtcttttggag
ctggaaggtctgggccggtag
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