Bifidobacterium indicum: BINDI_0988
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Entry
BINDI_0988 CDS
T03564
Name
(GenBank) helicase
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
bii
Bifidobacterium indicum
Brite
KEGG Orthology (KO) [BR:
bii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bii03032
]
BINDI_0988
03029 Mitochondrial biogenesis [BR:
bii03029
]
BINDI_0988
Enzymes [BR:
bii01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
BINDI_0988
DNA replication proteins [BR:
bii03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
BINDI_0988
Mitochondrial biogenesis [BR:
bii03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
BINDI_0988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_30
AAA_19
AAA_22
Pif1_2B_dom
AAA_16
SH3_13
Viral_helicase1
AAA_5
AAA
nSTAND3
AAA_11
NTPase_1
AAA_24
SLFN-g3_helicase
TrwB_AAD_bind
AAA_14
IstB_IS21
Helicase_RecD
MeaB
cobW
ABC_tran
AAA_7
AAA_18
Zeta_toxin
KdpD
AAA_25
Herpes_Helicase
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
AIC92252
UniProt:
A0A087VV93
LinkDB
All DBs
Position
complement(1284304..1285710)
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AA seq
468 aa
AA seq
DB search
MQQSEALTILNAGANVFLTGAPGAGKTYVLNEFVSQARKNGAAVSVTASTGIAATHINGQ
TIHSWSGVGISTSMTESLLRRIKTRRGRQIEGTDILVIDEVSMMHAWLFDMVDQACRAVR
HSPEPFGGIQVVLSGDFFQLPPVTRPNHVGGTIPGPEFQVSRERYAQMGKDPEGFVTESL
VWDDLDPVVCYLTEQHRQDDGQLLTVLTDIREGGVTQEDHDVLATRVGAVPAPGTVAVHL
FPVNRQADALNDQRLAAIGEEAHHYEATSRGETKLVERLKKNMLAPDDLTLKTGAAVMAL
RNDQDHQYVNGSIGTVKGFTSQAKGGWPIVSFQNGNEVTMKPAAWETMDGDTVLAAVNQV
PLRCAWGITIHKSQGMTLDRAVMDLRRTFAPGMGYVALSRVEGLDGLYLAGINEHAFLVS
PDAVVLDADLRANSKAACARLEDEGARSFTKRAVGQAPEDEFSQDQLF
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaatccgaagccctgaccatattgaacgcgggggccaacgtcttcctgaccggt
gcccccggagcgggtaagacctatgttctgaacgagttcgtcagccaggcccgcaagaac
ggggcggccgtatccgtgaccgcctcgacgggcatagcggccacccacatcaatggtcag
accatccactcctggagtggggtgggcatctccacctccatgacggagtctctgttgcgc
cgcatcaagacccggcggggtcggcagatcgaaggaaccgacatcctggtcatcgacgag
gtctccatgatgcacgcctggcttttcgacatggtggaccaggcctgtagggccgttcgc
cacagccctgaaccattcgggggaatccaggtggttctttcaggggacttcttccaattg
ccgcctgtgacccggcccaaccatgtgggtggcacgattcccgggcctgaattccaggta
tcgcgggagcgttacgcacagatgggtaaggacccggaggggttcgtcacggaatccctg
gtctgggacgaccttgatccggtcgtttgctatctgacggaacagcaccgtcaggatgat
gggcagttgctgaccgtgctgaccgacatcagggagggcggggtcacccaggaggaccat
gatgtccttgccacacgggtgggtgcagtaccggcgccaggcacggtggcggtgcatctc
ttccctgtcaacaggcaggccgatgccctcaacgatcagcgtctggcggccataggcgag
gaggcccaccactacgaggccacatcgcggggtgaaaccaagctggtcgagcggttgaag
aagaacatgttggccccggatgacctgacgctgaagaccggagctgcggtcatggccctg
cgcaatgaccaggatcaccagtacgtcaatggttcgataggcacggtaaaggggttcacc
agccaggccaaggggggctggccgattgtgtccttccagaacgggaacgaagtcacgatg
aagccggcggcttgggagaccatggacggggacacggtgttggccgccgtcaaccaggtt
cccctgaggtgcgcctggggaatcaccatccacaagtcccagggtatgacccttgaccgg
gcggtcatggacctgaggcgcactttcgcccccggtatggggtatgtggcgctctctcgt
gtggagggtctggatgggttatacctggctggcatcaatgaacacgccttcctggtttca
ccggatgccgttgtcctggacgcggacctcagagccaattccaaggccgcctgtgcccgg
ctggaggatgagggtgcccggtccttcaccaagcgggcggtcggtcaggctcctgaggat
gagttctcccaggaccagctcttctga
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