Bifidobacterium indicum: BINDI_1044
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Entry
BINDI_1044 CDS
T03564
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
bii
Bifidobacterium indicum
Pathway
bii00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bii00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
BINDI_1044
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bii01007
]
BINDI_1044
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bii03016
]
BINDI_1044
Enzymes [BR:
bii01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
BINDI_1044
Amino acid related enzymes [BR:
bii01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
BINDI_1044
Transfer RNA biogenesis [BR:
bii03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
BINDI_1044
Prokaryotic type
BINDI_1044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Motif
Other DBs
NCBI-ProteinID:
AIC92307
UniProt:
A0A087VVC5
LinkDB
All DBs
Position
complement(1350510..1351796)
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AA seq
428 aa
AA seq
DB search
MLDIQFIREHPDVVKESQRKRGESVELVDEVLKADDQRRSALQAYETSRAEQKSLGRQVA
SASGDSKAELIAGTKKLAEQVGRNKTAADEATAKYTNLLWRFSNLVEPEAPEGGEDDYVV
VKQVGTPRNFKSEGFDPKNHLDLGVGVAGIDMRRGVKISGSRFYFLRGDVARMEIAMLTM
AVDQAQEHGFIPTITPTLVRPEVMAGTGFLNSHADEIYRLREPDDQYLVGTSEVALAGMH
EGEILDLSDGPLRYCGWSSCYRREAGAAGKDTMGIIRVHQFNKVEMFVYCKQEDSREQHQ
QLLAMEQEMLEKVDVPYRIIDTAAGDLGSSAARKFDCEAWVPTQNRYRELTSTSNCTEYQ
ARRLNERERLEDGSTRSVSTLNGTLATTRWLVAILENHQNADGSIVVPEAMRSYMGGKEV
LEPTKWEV
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgctagatatccagttcattcgcgagcatcccgatgtggttaaggaatcccagcgaaag
cgcggcgagtccgtggaactcgtcgacgaggttctcaaggccgacgaccagcgcagatcg
gcgctccaggcctacgaaacctccagggccgagcagaagtccttgggcagacaggtggcc
tcggcatcaggtgattccaaggcggagctgattgccgggaccaagaagctggccgagcag
gtcggacgcaacaagaccgctgctgatgaggctacggccaaatacacgaatctcctgtgg
cgattcagcaatctcgtggagcccgaggcacccgaaggcggcgaggatgattacgtggtc
gtcaagcaggtcggcacgccgcggaacttcaagtccgaaggcttcgaccccaagaaccat
ctggacctgggtgtgggtgtggccggaatcgacatgcgccggggcgtcaagatctcagga
tcccgcttctacttcctccggggagatgtggcccgtatggagatcgccatgctgaccatg
gccgtggatcaggcgcaggagcatggcttcatcccgaccatcaccccgacactggtccgc
cccgaggtcatggcaggcaccggcttcctcaattcgcatgcagatgagatatatcgtctg
cgtgagcccgatgaccaatacctggtgggcacttctgaggtggcccttgccggtatgcat
gagggcgagattctcgatttgtccgatgggcccctgcgttactgcggatggtccagctgc
taccgccgtgaggcaggcgccgccggcaaggacaccatgggcatcatccgtgtccatcag
ttcaacaaggtggagatgttcgtctactgcaagcaggaggattcccgcgaacagcaccag
cagctgctggccatggagcaggagatgctggagaaggtcgacgtgccctatcgcatcatc
gatacggcggcgggcgatttgggatcctctgccgcaaggaagttcgactgcgaggcctgg
gtgcctactcagaaccgttatcgcgagctgacctccacctccaactgcaccgagtaccag
gcccgccgtctgaacgagcgtgaacgcctggaagacgggtcgacccgctcggtcagcacc
ctgaacggcacgcttgccacgactcgctggctggttgccatcctggagaaccaccagaac
gccgacggatccatagtggtaccggaggccatgcgctcctatatgggtggcaaggaggtc
cttgaacccaccaagtgggaggtctga
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