Bifidobacterium indicum: BINDI_1063
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Entry
BINDI_1063 CDS
T03564
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bii
Bifidobacterium indicum
Brite
KEGG Orthology (KO) [BR:
bii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bii03016
]
BINDI_1063
Enzymes [BR:
bii01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BINDI_1063
Transfer RNA biogenesis [BR:
bii03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BINDI_1063
Prokaryotic type
BINDI_1063
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
PseudoU_synth_2
Fapy_DNA_glyco
DKCLD
Motif
Other DBs
NCBI-ProteinID:
AIC92325
UniProt:
A0A087VV40
LinkDB
All DBs
Position
complement(1369436..1370572)
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AA seq
378 aa
AA seq
DB search
MKGSGQENRSGIVLVDKPQGVTSHDLVAAVRSRLGMRRVGHAGTLDPMATGLLIIGFGQA
TRLLKVVVGHDKTYLATIRLGQATTTDDAEGRMLPSGPDVRQAVKGLDRAAVERTITDSL
TGDINQVPDSFSAIKVNGRRAYDLARQGKEVELAARPIHIARFEVLDYRTLVLPGKDMGG
VDQQPETGEFDRSSSCEGALPAEAPGSPSGGLEVVDLDVVVTCSSGTYIRALARDLGDLL
GTGGHLTSLRRTRVGRFDLEAPDLEDRLVTGQVSTRTYTDRQGQTVSRNRVDLDQSSEEI
LRGSISLVDAARLIMPTIEVDGEEAAMLANGRFLKVGVEGATAAIARDETGPYLAAVLVP
HGGQLSKPDVVFRRDSQR
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgaagggttccggacaggaaaaccggtctggtattgtcctggtcgacaaaccccagggg
gtgaccagccatgacctggtggcggctgtgcgttccaggctgggcatgcggcgggtggga
catgccggaaccctggaccctatggccacaggcctgctgatcattgggtttgggcaggcc
acccgcctgcttaaggtggtcgtcggtcatgacaagacctatctcgccacgattcgtctg
ggacaggccacaaccaccgacgatgccgagggaaggatgcttccctccgggccggacgtc
cggcaggcagtcaagggtctggaccgtgcagccgtggagcggaccatcaccgacagcctt
acgggtgatatcaatcaggtgcccgattcgttctccgccatcaaggtgaacggccgccgg
gcctatgatctggccaggcagggcaaggaggtcgagctggcggctcggcccatacacatc
gctcgtttcgaggtgttggattaccgcaccctggtcctgccgggcaaggacatgggcggt
gtcgaccagcagcctgaaacaggtgagttcgataggtcgtcatcctgcgaaggtgcctta
cctgcagaagcacccggtagcccgtcaggcgggctggaagtggtggatctggatgtggtg
gtgacctgttccagcgggacctatatccgtgccttggccagggatttgggtgacctgctg
ggcaccggtgggcacctgaccagtctgcgtaggaccagggtaggtcggttcgatcttgag
gctccggacctggaagacaggttggtcaccgggcaggtctcgaccaggacctatacggac
cgtcaaggtcagacggtctccaggaacagggtcgatctggaccagtcctccgaggagata
ctgcgaggctccatcagcctggtcgatgctgccaggctgatcatgcccaccatcgaggtc
gatggggaggaggccgccatgctggcaaacggccgcttcctgaaagtgggggtcgagggg
gccacggccgccatcgccagggatgaaacaggcccatacctcgctgccgtcctggtaccc
catgggggccagctgtcgaaacccgatgtcgtcttccgccgtgattcccagcggtga
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