Bifidobacterium indicum: BINDI_1156
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Entry
BINDI_1156 CDS
T03564
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bii
Bifidobacterium indicum
Pathway
bii03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bii00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BINDI_1156
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bii03019
]
BINDI_1156
03016 Transfer RNA biogenesis [BR:
bii03016
]
BINDI_1156
Enzymes [BR:
bii01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BINDI_1156
Messenger RNA biogenesis [BR:
bii03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BINDI_1156
Transfer RNA biogenesis [BR:
bii03016
]
Prokaryotic type
tRNA degradation factors
BINDI_1156
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
KH-I_KHDC4-BBP
RNase_PH_C
KH_2
Motif
Other DBs
NCBI-ProteinID:
AIC92418
UniProt:
A0A087VVX0
LinkDB
All DBs
Position
complement(1465873..1468695)
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AA seq
940 aa
AA seq
DB search
MEGPEITAVEATIDNGSYGRRTVRFETGRLAQQADGAVAAYLDDDSMVLSTTTAGSSPKE
NYDFFPLTVDVEEKMYAAGKIPGSFFRREGRPSTEAILACRLIDRPLRPLFPHTLRNEVQ
VVETILALNPEDSYDVLALNAASASTLISGLPFEGPVSGLRLALIDGQWVAFPRWSERER
AVFELVVAGRVVEDGDVAIAMIEAGAGKNAWTLIYDEGQIKPDEEVVAQGLEAAKPFIKV
LCEAQGELKAKAAKPTKEFQLFPEYTEELYTRIDQIAHADLDEALSIAEKLPRQDRIHEI
KEKVREVLANEFVEMDEAEKEKELGNAFKELQRQIVRRRILTQDYRIDGRGLRDIRTLSA
EVDVVPRVHGSALFQRGETQILGVTTLNMLKMEQTIDALSGPSTKRYMHNYEMPPYSTGE
TGRVGSPKRREVGHGNLAERALIPVLPSRDDFPYAIRQVSEALGSNGSTSMGSVCASTMS
MLAAGVPLKAPVAGIAMGLVTGEVDGRPTYKTLTDILGAEDAFGDMDFKVAGTSEFITSL
QLDTKLDGIPADILAAALQQAKEARATILDVIDECIDGPAEMSPYAPRIITTKVPVDKIG
EVIGPKGKMINQIQEDTGADVSIEDDGTVYIASEGGEAAAKAKEVIDQIANPHVPEAGET
FNGKVVKTTSFGAFVNLTPGTDGLLHISQIRNLANGERIDAVEDVLKEGDTVEVIVQGVD
DRGKISLAVPGFEDQESGAGRDRGGRGDRRDRGGRSDRGERRERSDRGERRERRDHHDHV
ERPEREDDDRYPSRRASRPEREDRYFDEDDRGEAPRRRRPRRDSGFEGDDWSEDEDGASR
YDRRRRTGRDDEEERGERSGRRHSDRRERSDRGDRGDRGGERSGRREHRSSGRGGYRGRR
ENPRYAADEHYDEYRADREERSERPRRRVRRDFDPFDSED
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggagggtcccgaaatcacggctgtagaagccacgattgacaatggttcatatggcagg
cgcacggtgcgcttcgagacgggtcgtctcgcccagcaggcggatggggcagttgccgcc
tacctcgatgacgattcgatggtcctgtcgaccaccaccgccggatccagccccaaggag
aactacgacttcttcccgctcaccgtcgatgtggaagagaagatgtacgccgcgggcaag
attcccggctccttcttccgtcgtgaaggtcgtccctcgactgaggccatcctggcctgc
cggttgatcgaccgtcccctgcgccccctcttcccgcatactctgcgtaacgaggtccag
gttgttgagaccatcctggccctcaaccccgaggattcatacgatgtgctggctttgaac
gccgcatccgcctcgaccctgatttccggactgcccttcgaggggccggtctcgggtctg
cgtctggccctcatcgacggccagtgggtggccttcccccgctggagcgagcgtgagcgc
gcggtcttcgagctggttgtggccggtcgtgtggttgaggacggcgatgtcgccatcgcc
atgatcgaggctggtgccggcaagaacgcctggacccttatctatgacgagggtcagatc
aagcctgatgaggaggtcgtggcccagggactggaagccgccaagcccttcatcaaggtc
ctgtgcgaggcgcagggtgagctcaaggccaaggcggccaagcccaccaaggagttccag
ctcttccccgagtacaccgaagagctctacacccgtatcgatcagattgcccacgctgac
ctggatgaggccctctccatcgcggagaagctgccccgtcaggaccgcatccatgaaatc
aaggagaaggtccgcgaggtcctggccaatgagttcgtcgagatggatgaggccgagaag
gagaaggagctgggcaacgccttcaaggagctccagcgccagatcgtccgtcgtcgtatc
ctgacccaggattaccgcatcgacggccgcggcctgcgcgatatccgtaccctgtccgcc
gaggtggacgtggtgccccgggtgcacggttcggccctgttccagcgcggtgaaacccag
atcctgggtgtcaccaccctgaacatgctcaagatggagcagaccatcgacgccctgtcg
ggtccctccaccaagcgctacatgcacaattacgagatgccgccctattcgaccggtgag
accggccgtgtgggttcccccaagcgtcgcgaggtgggccacggcaacctggccgagcgt
gccttgatcccggtcctgcccagccgtgatgacttcccctatgccatccgtcaggtctcc
gaggccctcggttccaacggatcgacatccatgggttcggtctgcgcctccaccatgtcc
atgctggccgccggcgtgcccctgaaggccccggtcgcaggcatcgccatgggtctggtc
accggtgaggtggacggcaggcccacctacaagaccctgaccgatatcctgggcgccgag
gatgccttcggcgacatggacttcaaggttgctggcacctccgagttcatcacctccctc
cagctcgacaccaagctggacggtattcctgccgatatcctggccgccgccctgcagcag
gccaaggaggcccgcgccaccatcctggacgtgattgacgagtgcatcgacggtccggct
gagatgagcccctacgcaccgcggatcatcaccaccaaggttcctgttgacaagatcggt
gaggtcatcgggcccaagggcaagatgatcaaccagatccaggaggataccggtgccgat
gtctccatcgaggacgacggtacggtctacatcgcctccgagggtggcgaggcagcggcc
aaggccaaggaggtcatcgaccagatcgccaacccgcacgttcccgaggcgggcgagacc
ttcaacggcaaggtcgtgaagacgaccagctttggcgcctttgtcaatctgaccccgggc
acggacggccttctgcatatctcgcagattcgcaacctggccaatggtgagcgcatcgat
gccgtagaggacgtgctcaaggagggcgataccgtcgaggtcatcgtccagggagtggac
gaccgcggcaagatctctttggccgttccaggatttgaggaccaggagtccggtgcgggt
cgggaccgcggtggccgtggagaccgtcgcgatcgtggaggccgctccgacaggggagag
cgccgtgagcgttccgaccgcggtgagcgtcgcgaacgtcgcgatcatcatgaccacgtc
gagcgccccgagcgcgaagatgacgaccggtacccgtcgcgcagggcctccaggcccgag
cgtgaggaccgttacttcgacgaggacgaccgcggggaagccccccgtcgccgccgtccc
cgccgtgacagtggattcgagggtgacgactggtcggaggacgaggatggtgcctcccgt
tatgaccgtcgccgccgcaccgggcgtgatgacgaggaggagcgtggtgagcgttccgga
cgccgccactccgatcgccgtgagcgttccgaccgtggagatcgcggagaccgtggcggt
gagcgctccggtcgtcgtgagcaccgttcctcgggtcgtggtggataccgtggccgcagg
gagaacccccgctatgccgccgatgagcattacgacgagtaccgtgccgaccgcgaagag
cgctccgagcgtccccgccgtcgggttcgcagggacttcgatcccttcgacagcgaggac
tga
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