Bifidobacterium indicum: BINDI_1179
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Entry
BINDI_1179 CDS
T03564
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
bii
Bifidobacterium indicum
Pathway
bii00300
Lysine biosynthesis
bii00470
D-Amino acid metabolism
bii01100
Metabolic pathways
bii01110
Biosynthesis of secondary metabolites
bii01120
Microbial metabolism in diverse environments
bii01230
Biosynthesis of amino acids
Module
bii_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bii00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BINDI_1179
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BINDI_1179
Enzymes [BR:
bii01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BINDI_1179
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AIC92440
UniProt:
A0A087VVA1
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All DBs
Position
complement(1493032..1494573)
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AA seq
513 aa
AA seq
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MSQRKEEGAALGDIWPSAVRRDDAGAVDVRSIPVEDLAERYGTPLYLMDTSFMADRARIF
RETASRSLPTATTQVSYAGKAFLSKEVVRIMLDRGLNIDTCTLGEMLIAKAAGAPGRRLV
LHGNNKSDREISLAIEEGYGKIVIDAADEPERIAAIAHGLGRRARVMLRVTVGVHAGGHE
YISTSHEDQKFGVPMLAPGADASPLDRFGAGDGQESMSRTAEVGNGVLSANSSDLFQAGA
DGAPINPVLAAALDTLANGPAIRVLKDIQAHAGDLELVGIHTHIGSQIHGDSAFGQAANR
MMLLRRTFWETDGFLLPEVDLGGGFSVPYLPDEDRMDLSGALGDLGLAIGRINDRLGMPM
PIISFEPGRWIAGPSGMTLYRVGTVKPVPLSDGTVRTYVSVDGGMSDNIRPALYGADYTA
VLANRRGSSETIRARVVGKHCESGDIIVRDVSLPKDIRRGDLLLVPVTGAYGRTMANNYN
QVLIPPVVAVDGAGDHLMLRGQAMDDLLELDQG
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
gtgagtcaacggaaagaagagggggcggccctgggtgatatctggccgtccgctgtcagg
cgggatgatgccggtgcagtggatgtccggagcatcccggtagaggatctggctgagcgg
tacggcaccccgctctatctgatggacacctccttcatggccgaccgggccaggattttc
agggagaccgccagccgcagtcttcccacagccaccacccaggtcagctacgcaggcaag
gccttcctgagcaaggaagtcgtccggatcatgctggacaggggcctcaacatcgatacc
tgtaccctgggcgagatgctgattgccaaggcagccggtgcccccggacgccgcctggtg
ctgcacggcaacaacaagtccgatcgggagatatcccttgccatagaggaggggtatggg
aagatcgtcatcgatgcggccgatgagccggagcgtatagcggccatagcccatggcctg
ggcaggcgggcccgggtcatgctcagggtcacggtgggggtccatgccggtgggcacgag
tacatctccacatcgcatgaggaccagaagttcggcgtccccatgctggccccaggggct
gatgccagtccacttgatcgatttggcgccggcgacgggcaggaatcaatgtcccgaaca
gcggaggttggcaacggggtcttgtccgcgaactcctccgaccttttccaagcaggtgcc
gatggggctccgatcaatccggtcctggccgccgccttggatactctggccaacggtccc
gccatcagggttctgaaggatatccaggcccatgcaggcgacctggaactggtgggaatc
catacccacatcggatcacagattcacggtgactcggccttcgggcaggcagccaatcgg
atgatgttgctcagacggaccttctgggagaccgacggtttcctgctgcccgaggtggat
ttgggtggcggtttctccgttccctacctgccggacgaggatcggatggacctgtcgggt
gctcttggcgacctgggtctggccatcggcaggataaacgaccggcttggtatgcccatg
cccatcatctccttcgaacctggccggtggattgcaggccccagcggcatgaccctgtat
cgggtggggacggtcaagcctgtacccctctcggacgggaccgtgcggacttacgtgtca
gtggatggcggcatgagtgacaatatccgcccggcgctttacggggcggactacacggct
gttctggccaataggaggggcagttcggagaccattcgcgcccgggtggtcggcaagcac
tgtgagtcgggcgatatcatcgtgcgcgatgtttccctgcccaaggacatccgccggggg
gacctcctcctggtgccggtgaccggggcctacgggcggaccatggccaacaactacaac
caggttctgataccgccggtcgtggcggtggacggggctggtgaccacctgatgctgcgg
gggcaggccatggacgacctgctcgaactggatcagggctag
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