Bombus impatiens (common eastern bumble bee): 100740259
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Entry
100740259 CDS
T04362
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog isoform X1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
bim
Bombus impatiens (common eastern bumble bee)
Pathway
bim04140
Autophagy - animal
bim04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
bim00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100740259
04148 Efferocytosis
100740259
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bim04131
]
100740259
Membrane trafficking [BR:
bim04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
100740259
Hops complex
100740259
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Beta-prop_WDR19_1st
Beta-prop_Vps41
TMP_4
Motif
Other DBs
NCBI-GeneID:
100740259
NCBI-ProteinID:
XP_012239730
UniProt:
A0A6P3US80
LinkDB
All DBs
Position
Unknown
AA seq
835 aa
AA seq
DB search
MLAMLTADWFPLGRDIYFRKFELYPLSFQDEVSSNNVLVAAPYGGSIAVTRNSKKLVKVQ
GANKPTIYLYTSSGKLTAKLQWSGGQLILLGWSQQEELLCVEDDGMVHIYDMFGTYQHAF
SMGNEVKDTKVVEAKFFVSYSGTGIAVLTSTNRIFLVNNIVEPKVRQISEIPRYGGQIEC
WCLVHCDRETRVILSNRDGIFVIHQSHQTATHIPFDNLFTRHNKVFTIVAMAVSGNNRHI
ALYTDTGHLYMGTIDFNEKYCEHYTNMKEPLENIAWCGTEAVICSWNSTVMVIGRTAETI
IYTYDGPVHLITEIDGVRVLSGSSHEMIQKVPNVVQKIFRINSTDPASYLLEASKQFQKR
SHKADSYMDLVKDKLDPAIKACIDGAGHEFDFETQKLLMRAAKFGKGFSKTINPEYYVNM
CRTLRVLNAVRHPAIGIPLTYTQFTILTSQVLLDRLVARRHYYLSIQIARHLQLPEIDGE
SRILAHWACYKVKQTQLDKEQIAEEIADKLGYAPGVSYSEIARRAADCGRKQLAIKLIDY
EPRAHQQVPLLLTLGEERAALRKAVESGNTDLVYTVILHLRENMPLGDFQMSIMHCPLAM
ALYIKYCQNHNRETLRDIYNQYDDFHSQAIWFITESYQRKNTMSREALLQSAQENFKLAR
NDTNAALTEEQIKLLRYQRSMEDVLKKPIVGKPLQDTVKVLLLRNEYKLADKLRSEYKIS
DRRYWWLRIQCLAEQGVWNELEKFSKSKKSPIGYEPFIDQCLKYNEEREAKKYLPKVRDE
LKVKYLVKLKMMNEAVQTAIEQKDVNALTYLLGQCETTDRQLIDKINMYITSLKN
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgttagcaatgttaaccgccgattggtttcctttgggtcgagacatctattttagaaaa
tttgaattgtatccgttatctttccaagacgaagtatcaagtaataatgtgttagtggca
gctccttatggaggttctatcgcagtcaccagaaattctaagaaattggtgaaagttcaa
ggagcgaataagcctacgatatatttatacacatcttctggaaaactaacagccaagttg
caatggagtggtgggcaactaattcttttgggctggtctcaacaagaagaattactatgt
gtagaagacgatggcatggttcatatatatgatatgtttggaacatatcaacatgctttt
agtatgggaaacgaagtaaaagatactaaggttgtagaagcaaaattttttgtcagttac
agtggaactggtattgcagttctgacatctactaatcgtatatttctagtgaataatata
gttgaaccaaaagttagacaaatatctgaaattcctagatatggcgggcaaattgaatgc
tggtgtttagttcattgcgatagagaaacacgtgtgatattatcgaacagagatgggata
tttgtgatacatcagtctcatcaaactgcaactcatataccatttgacaacctttttacc
agacacaataaagtgttcactatagtcgccatggcagtgtctggaaacaatcgtcatatc
gctctttatacggatactgggcatttgtacatgggtactatagatttcaatgaaaaatat
tgtgaacattatacaaatatgaaagagcctttagaaaacatagcatggtgtggaacagaa
gctgtaatatgtagttggaatagtaccgtaatggtaatcggacgaacagccgaaaccata
atatatacgtacgatggaccggtacatcttattacagagattgatggtgtacgtgtatta
tctggttcttctcatgaaatgatacaaaaagtaccgaatgtcgttcaaaaaatatttcga
attaattcaaccgatcctgcgtcttatttattggaagcttctaaacagtttcaaaaaagg
agtcacaaagctgatagttacatggatttagtcaaagataaattagatcctgcaataaaa
gcttgcatcgatggagctggccatgaatttgattttgaaacacaaaagcttttaatgagg
gctgctaaatttgggaaaggatttagtaaaacaattaatcctgagtattacgtcaacatg
tgtcgaactttaagagttttaaatgcagtaaggcaccccgcaattggaattccactaaca
tatacacaattcactattctcacgagtcaagtgttattggatagactcgttgcaagaaga
cattactatctaagtatacaaattgcacggcatcttcagttaccagagatcgatggagaa
agtcgaatattagctcattgggcttgctataaagtaaaacaaacgcaattagataaggaa
caaatagcagaagaaatagctgataaattaggctacgcgcctggtgtttcttatagcgaa
attgcaagaagagcagccgactgcggccgaaaacaactagcaattaaactgattgattac
gaaccacgtgcacatcaacaagtgccacttttattaacgcttggtgaagaaagagccgct
ttacgtaaagccgttgaaagtggaaatacagatttggtttataccgtaatacttcatctc
agggagaacatgccactcggtgattttcagatgtccataatgcactgtcctttagctatg
gctttatacatcaaatactgtcaaaatcataatcgagaaacacttcgcgatatttataat
cagtatgatgattttcattctcaagcgatatggttcattaccgagagttatcagcgaaag
aatacgatgtcaagagaagcattattacaatctgcacaggagaatttcaagttagctcgt
aacgatactaatgcagctttgacagaagaacaaataaaattattgcgctatcaaaggtcc
atggaagatgtattaaagaaaccgattgtagggaaaccacttcaggatactgtaaaagta
ttactattgcgcaatgaatacaaattagctgataaattaagatcagagtataaaatatcg
gatcgaagatattggtggttacgaatacaatgtttggccgagcagggcgtatggaacgaa
ttggaaaaattctccaaaagtaaaaaatcccctattggttatgagccttttatagaccaa
tgtttaaaatataatgaagaaagggaagcgaaaaaatatttacctaaagtaagggacgaa
ttaaaagtaaaatacttagttaaattaaaaatgatgaacgaggccgttcaaacggcgata
gaacaaaaagatgttaatgcgttaacttacttactaggtcagtgcgaaactacagatagg
caattaattgataaaattaatatgtatataacaagtcttaaaaattga
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