Bombus impatiens (common eastern bumble bee): 100740333
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Entry
100740333 CDS
T04362
Name
(RefSeq) protein SMG7
KO
K14409
protein SMG7
Organism
bim
Bombus impatiens (common eastern bumble bee)
Pathway
bim03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bim00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100740333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bim03019
]
100740333
Messenger RNA biogenesis [BR:
bim03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
100740333
mRNA cycle factors
Common to processing body (P body) and stress granule
100740333
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
Motif
Other DBs
NCBI-GeneID:
100740333
NCBI-ProteinID:
XP_003487488
UniProt:
A0A6P3DSH5
LinkDB
All DBs
Position
Unknown
AA seq
1156 aa
AA seq
DB search
MGLNAAVQALKKAEPLKDKVQRCRDLLNDSDAWVCQQQLQKIYQQVLILDLEYALDRKVE
QELWNLGFKNYIATLQSQAKDRKNPKRGESQALLSWCLEAASGFYLTLLQEICTAFDLDL
PFRRKGYIYGCTSPWKAIEKLSVPHKSSCFYACQYCLVHLGDIARYRNESKQAELFYRHA
VSLSPSSGQPYNQLALLEASRGNKLATVFHYTRSVAVKHPFPVATTNLAKTLSSALNDTS
LNIDGKTKLSSQEYVAVFLKLHGVIHNLGDLKVASTYAKLLTETLTALVATESFSSWMLV
QMFVINLYALEHTTSVVMGNNEPLRHEQLTSDEKIARDCILDLIAGSLSALLLPVYTIKN
SIIEYFALPSIKLCLDWIHTKPTVLEELAFTSRLQIWPSLCVLLNALQNCVADFAYDQYI
KVPLPEDRDLQGFLPLEKSFECLKFTSTDLEDNVEASNKLRAVRILRLGHCLAQYKVNGT
ALIAITLGEEKGDNRFSSMSEGNGLSNELMKELEELSLNRGRQSAVSTSPVLSESASSKG
STDVDMLEHALDKRIGILKPQGSLERSKDTVLITSTESSTFETNVQPTTRKPRQNIAMQT
IMRRAETEQKQVTFKNLSPLNVEEESEKKFKLSGASVSPVKGVPPGGSKNMVVGEISKAN
NVSNAIANTPITVQSRLPLMPSATSTVQSPIITTQNQVKTTKLQHAVSAPQSSQINHLSV
KEQQASGISTPISGISQCVGTICYQNPTFNVQNPQFTKNYVTNHVGNLSSYPIQGHFTSS
VQQSMQSQSIGLQYTSSQNRSMHQRAQTHNIPQNTLLHQNLGILSSAQPSNVIPNASQNI
NSQQSRNIGVQQNRSLNTQQNHNLNVQQQNVMKTSLRPSTISLHNQGSLPNSTIANVSTL
STLNTYQKKLHHAAPVIPNASNVPSNSLNPTTTPNFQYNFNQNDFNQNTFGQVPQKQLSS
VYNKNSDVLEFSLPNHLGMSKNQSQSTTNYPLFQNYETTNFNLWKDTQQSQHSIPCWGST
SRSMQLHSEDTSVIENYHNWEDSSNPGNIMSQIPLRTSNSYPSDSQQTKHFGTGSNFESS
RSLEVDSKSNQSISTGNTYSLFSSNNAWGSNVQSCNVSNQDQTKTRLNQQSLWFGPGPSP
LERLLEQQKSLREGGT
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgggcctaaacgcagctgtacaagctttaaagaaagcagagcctttaaaggacaaagta
caacggtgcagagatcttctaaatgatagtgatgcgtgggtatgccagcaacagctacag
aagatatatcaacaagttctgatattggatttggaatatgctttggaccggaaagttgag
caggaactttggaatctaggatttaaaaattatatagcaactttacaatcccaggcaaag
gataggaaaaatcctaaacgtggagaatctcaagctttacttagctggtgcttggaagct
gctagtggtttttatttgacattattacaagaaatttgtactgcatttgatttagattta
ccatttagaaggaagggttacatttatggatgtacatcaccatggaaagctattgaaaag
ttatcagtgcctcataaatcttcatgtttttatgcgtgccaatattgccttgtgcattta
ggggatattgctcgttatagaaatgaaagtaaacaagcggagttattctacaggcatgct
gtatcattgtcaccatccagtggacaaccatacaatcaattagccctccttgaggcatcg
cgcggtaacaaattggcaactgtttttcattacacacggtctgtagctgtaaaacatcct
ttccccgttgccacaacgaacttggcaaaaacattatcgtctgctttgaacgatacatcg
ctgaatatagatggaaaaacaaaattatcttctcaagaatatgtagcagtttttttgaaa
cttcatggcgttatccacaatcttggcgacttaaaagttgcttcaacatatgcgaaatta
ttaactgagacattgacagccttagttgctacagaaagttttagctcttggatgcttgtt
caaatgtttgtgattaacttgtatgccttggaacatacaacgagtgttgtcatgggtaat
aatgaaccgttaagacacgaacaattaacatctgatgagaagattgctcgtgattgtatt
ttggatctcatagctggaagcctgtctgctttattgttacctgtttatacaatcaaaaat
tctattattgagtatttcgctttgccttctataaaactgtgccttgattggattcataca
aaacccacagttttggaggaactagcttttacatcgagacttcaaatttggcccagctta
tgcgtattgttgaacgctttgcaaaactgtgtggccgatttcgcatatgatcaatatatt
aaggtaccactgccagaggatcgtgacctacaaggattcttaccgttagagaaaagtttc
gaatgtttaaaatttacgagtaccgatttagaagataatgtcgaggcttccaataaactg
cgtgcagttcgtattcttcgtttaggtcattgtttagcacaatataaggtcaatggtact
gcgttaattgctattacattaggtgaagaaaagggtgacaacaggttcagttctatgagt
gaaggaaacggtttgagtaatgaattgatgaaagaattagaagaactcagtttaaataga
ggaagacagtctgctgtatcaactagtccagttctctcagagtctgccagcagtaaaggt
tctactgacgtcgatatgttggaacatgccttagataagaggataggtatcttgaagcct
caaggttcgttagagcgaagtaaagacacggttttgatcacctctacggaatccagtact
tttgaaactaatgtccaacctactacaaggaaaccaaggcaaaacatagcgatgcaaacg
ataatgcgacgtgctgaaactgaacaaaaacaggttacgtttaaaaatttgtctccatta
aacgtagaagaggagagtgaaaaaaaatttaaattgagtggagcatcagtgagtccagta
aaaggtgtccctccaggtgggagtaaaaatatggttgttggagaaatatcaaaggcgaac
aatgtttcaaacgcgattgcgaatacaccaatcaccgttcaaagtcgattaccgttgatg
ccttctgctacatctactgtgcaaagcccaatcattaccactcaaaatcaagtaaaaacc
acaaaattacagcacgctgtctcagcaccacaatcttctcaaattaaccatctttctgta
aaagaacaacaagcgtccgggatttcgactccaatatctggaatatctcaatgtgtaggg
actatttgttatcaaaatccaacatttaatgttcagaatccacaatttacgaaaaattat
gtcacgaatcatgttggaaatttatcgagttatccgattcaaggacattttactagttca
gtacaacaatcgatgcaatcacagagtataggtttacaatatacatccagtcaaaatagg
tctatgcatcagagagcacagactcataacatacctcagaatacattgttgcatcaaaat
cttggaatactgtcttcagctcagccgagtaatgttataccaaatgcttcacaaaatatt
aattcccaacaaagtagaaatattggcgtgcagcaaaatcgtagtttgaatactcaacag
aaccacaacttgaatgtgcaacaacagaatgttatgaaaactagtcttagaccaagcaca
atatctttacataatcaaggttcattacctaattcaactattgcaaatgtttctactttg
tcaacattaaatacatatcaaaagaaacttcatcacgctgctcctgttataccaaatgca
tcaaatgtaccaagcaattcgctaaatccgacaactacgcccaattttcaatataatttt
aatcagaatgattttaatcagaatacctttggtcaagtaccacaaaagcaattgtcgtcc
gtgtacaataagaattcggatgttttggaattttcgttaccaaatcatttaggtatgtca
aaaaatcagtctcagtccacaactaattatccgcttttccaaaactatgaaaccacaaat
ttcaatctgtggaaagacactcaacagtcacaacattctataccttgctggggttcaact
agcagaagtatgcaattacatagtgaagatacgtctgtcattgaaaactatcataattgg
gaagactcctctaatcctggaaacataatgtcacaaattccattgagaacttcaaatagt
tatccatcagattctcaacaaaccaagcattttggtactggaagtaatttcgaaagttct
agatctttagaggtagatagcaaatcaaatcaatcaatcagcacaggaaacacgtattct
ctatttagcagtaacaatgcatgggggtctaatgtacaaagttgtaatgtgtcaaatcaa
gatcaaacaaaaactcggcttaatcaacagtctttatggtttggacctggaccatctccc
ttggaacggcttttggaacagcaaaaatcattacgtgaaggaggtacctga
DBGET
integrated database retrieval system
