Bombus impatiens (common eastern bumble bee): 100740451
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Entry
100740451 CDS
T04362
Name
(RefSeq) gem-associated protein 5
KO
K13133
gem associated protein 5
Organism
bim
Bombus impatiens (common eastern bumble bee)
Brite
KEGG Orthology (KO) [BR:
bim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bim03019
]
100740451
03041 Spliceosome [BR:
bim03041
]
100740451
Messenger RNA biogenesis [BR:
bim03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100740451
mRNA cycle factors
P-body specific factors
100740451
Spliceosome [BR:
bim03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
100740451
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RIG_2nd
TPR_GEMI5
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_CDC20-Fz
WD40
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_WDR3_2nd
DSE1_N
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_RIG_1st
Beta-prop_EIPR1
WD40_RFWD3
WD40_Gbeta
Beta-prop_WDR75_1st
ASA1
Beta-prop_WDR41
Beta-prop_TEP1_C
WDR90_beta-prop_4th
NBCH_WD40
TAF1C_beta-prop
RAB3GAP2_N
Tricorn_2nd
DDE_Tnp_IS240
CD_NTase_C
Motif
Other DBs
NCBI-GeneID:
100740451
NCBI-ProteinID:
XP_012249283
UniProt:
A0A6P3V652
LinkDB
All DBs
Position
Unknown
AA seq
1317 aa
AA seq
DB search
MNEVTLPPSPNWYLSNILACSFNGTIAWGARNIIVIGKLNENDKILQYSIIKHGHKSKVT
CLAFTPQFEEVNANLIASTGDDNTIKIWNSETLSVTYTYLLENDKQAIGVEWSYKNPYVI
YAATSDGYVLSWNAYFNTVSSISLGKVIPTYISSCPHDPHLVAVGSKSGLVYIVNFQDKG
KVVYKLRGHDTEIVSLSWCPSKNNVIRGNLNEDLLLASGGKDRSIFIWKAGGDGRYEMTI
SLPSAPLDSQQHRSKLNASVGNWVVVHWIEPRLLLTSSCWGELISWDLSTMIKGKPNVKV
IHAYHNRGLFCIAHVPNTQDISEENWRIRQSCRHTIWTVAQDRRIICCGIKENNVEIDYD
IFTQSGFVYCMAACPLDTSHIAFGVGDAMLRLWNLSAAHDTTFDITVLWQKIKGKIRAIA
WHPEKENLLAYATDEGRVGVFNINGNKSPTLYRQYHRSVIYTIGWGPCPKNKYVLYSCGE
GELVYYDSEKVTNEEPKSVLKKECTEFSWKPDFSCLAVGFENGTISFLNRKFETRGCAKF
ATEMVHCLVWHPESTATDLTFSQLKNYLAVAFESCTILIFDLTNFIDHFEKMEDSTNNEN
LKEKCDIYKVHEIVASLTGHVQNVVCLAWSPHVSGHLISSSYDGTAQIWNVRTQELIATY
TGHNGPVLCCMWSPLDPDFIITGSADSTVRIWRVAYNLPQKKEYKKLPKKAKKKQNETNK
IVDTIENSLLELTNATSECSISESKTMMITETKNKKVRPYFSKCPNTTSRKTLLLHSLLN
VVKNMKNENFNMEDVQKDASYHMIPILFSSQENFISYLTTEKSAHIERNNYDVITEMDIW
YDNLKQNLEEAAKEKRLNDFLVSLSASLSMKMWKDMCELYAYQLVTEGNPCKAVSYLLCI
HKTYKAIEVFQAANLYKEAYVLAKCRLESDDPVLTEILKEWAKYSVNSGNFEQAAWIHTK
LGEFSDTVKYLARRKDAATLITAAEIAFLCNDEMSSKSLAEQAIIATLINSEYDFARNII
EKFPYLKYQEIYLLTYEELKKVINGNVTLDLIQTWIDGKSNYGVLQTLETVCGDCNSYYT
DLCQNNFCNISDKEKMLWLTIGHEVALAIASIEKEQKLKHIVTALHTITQFELLHQKDLE
HLHSFLIEIIVKLDIKSPMDETSIYTKADYSVSISLRAYLCYALLNWFVYNINEESINNN
IQNYTNLIEHLLEDALNKQAIRHWTVTNEINKLENQLASAKCKMQEEIKTDQDIESFMEK
LNTLKTQKNQILNDLVYIPNPVMVYGKANELCSKLCDETIKNKFLESISKMWLDATT
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaagtaactttaccaccctcaccaaattggtatttaagtaatattcttgcttgt
tcttttaatggtactatagcatggggtgctagaaatataattgttattggtaaacttaat
gaaaatgataaaatattacaatactctattattaagcatggtcacaaatccaaggtgaca
tgtcttgcatttactcctcagtttgaagaagtaaatgctaatttaatagcctccacagga
gatgataacacaattaaaatatggaattcagaaacattatctgtaacttatacttatctc
ttagaaaatgataaacaagcaataggcgtagaatggtcctataaaaatccttatgttata
tatgcagcaacttctgatggttatgtattatcatggaatgcttattttaatactgtttct
tcaatttcattaggaaaagtgatacctacttatatttcttcttgtcctcatgatccacat
cttgtagctgtaggctcaaagagtggattagtttatatcgttaattttcaagataaaggg
aaagtagtttacaaacttagaggacatgatactgaaatagttagcttatcatggtgtccc
tcaaaaaataatgtaataagaggaaatttaaatgaagatttactgttagcttcaggaggg
aaagatagatcaattttcatttggaaagctggtggagatggacgttatgaaatgacaatt
tcattgccttcagcacctcttgattctcagcagcatagaagtaaattaaatgcttctgta
ggtaattgggtagtagttcactggatagaacctagactattgcttacaagttcatgttgg
ggtgaattaatctcttgggatttatcaacaatgataaaagggaaacctaatgtcaaagta
atacatgcatatcacaacaggggtttattttgtattgcgcatgtaccaaatacccaagac
atttcagaagaaaattggagaataagacaaagttgtagacatacaatttggactgtggca
caagatcgaagaattatttgttgtggaataaaagaaaataatgttgaaatagattatgat
atatttacacaaagtgggtttgtttattgcatggctgcttgcccattagacacttcacat
attgcatttggtgttggagatgcaatgttacgattatggaatttatcagcagcacatgat
actacttttgatataactgtcttatggcaaaagattaagggaaaaattcgcgcgatagca
tggcatcctgaaaaagaaaatttattggcttatgcaactgatgaaggtcgagttggtgta
tttaatataaatggaaataaatcacctacattgtacagacaatatcatagaagtgtaata
tatactattggttggggcccatgtccaaaaaataaatatgttttatactcttgtggagag
ggagagcttgtgtattatgactcagaaaaagttacaaatgaagaaccaaaatctgtattg
aaaaaagaatgtacagaattttcttggaagccagatttttcttgtttggcagtaggattt
gaaaatggaacaatttcatttcttaatcgaaaatttgaaacacgtggatgtgctaagttt
gcaacagaaatggtgcattgcttggtctggcatcctgagagtacagcaacagacttgaca
ttttctcagctaaaaaattatttagctgttgcttttgaatcatgtactatacttattttc
gatttaactaattttatagatcattttgaaaaaatggaagattcaactaataatgaaaat
ttaaaagaaaaatgtgatatttataaagtgcatgaaattgtagcttctttaactggacat
gtacaaaatgttgtctgtttagcatggagtccacatgtaagtggacatctaatatctagt
agttatgatggaactgcacagatatggaatgttagaacacaagaattaatagctacatat
acaggacacaatggcccagtattgtgttgcatgtggagtccattagaccctgattttatt
ataacaggctctgcagattctacagtacgaatatggagagttgcttataatttgccacaa
aaaaaagaatataaaaaattgccaaaaaaagctaaaaagaaacaaaatgaaacaaataaa
attgtggatactattgaaaatagtttactagaattaactaatgctacatcagaatgttct
atttcagagtcgaagacaatgatgataacagagacaaaaaataaaaaagtacggccatat
ttctcaaaatgccctaatacaacatctcgaaaaacacttttacttcattctcttttaaat
gtcgtaaaaaatatgaaaaatgaaaattttaatatggaagatgttcagaaagatgcttcg
tatcatatgataccaatattattttcatcgcaagaaaattttatatcttatttaactact
gaaaaatctgctcatattgagagaaataactatgatgtaatcacagaaatggatatatgg
tatgataatctcaaacagaatttagaagaagctgctaaagagaaacgtctcaatgacttt
cttgtttcactttcagctagtctgtccatgaaaatgtggaaagatatgtgtgaactatat
gcatatcaattagtaactgaaggcaatccttgtaaagcagtgtcatatttactttgtata
cataaaacctacaaagctatagaagtatttcaggctgcaaatttgtacaaagaagcatat
gttcttgcaaaatgtagacttgaatctgatgatccagtactaacagaaatattaaaagaa
tgggcaaaatatagtgtaaattcaggcaatttcgagcaagcagcatggattcatactaaa
ttaggagaattttccgatacagtaaaataccttgcacgccgtaaagatgcagctacgtta
ataacggcagctgaaattgcttttttatgtaatgatgaaatgtcaagtaaatctttagct
gagcaagcaataattgcaactttgataaattcagagtatgattttgcacgaaatataata
gaaaagtttccatatctcaagtatcaagaaatatatttgttaacttatgaagaacttaaa
aaagttattaatggaaatgtaactcttgatttgattcaaacgtggatagacggaaaatca
aattatggtgtattacaaactttagagacagtttgcggtgattgtaattcttattacact
gacttgtgtcaaaataatttttgcaatatttcagacaaggagaaaatgttatggttaaca
attggtcatgaggttgcattagcaatagcctctattgaaaaagaacagaaattaaagcat
attgttactgcattacatacaatcactcaatttgaactactacatcaaaaagatttagaa
catctacatagttttttaattgaaattatcgtaaaactagatattaaaagtccaatggat
gaaacaagtatttatacaaaagctgattattctgtatcaattagtttacgagcttattta
tgttatgctcttctaaattggtttgtatataatataaacgaagaatctattaataataat
atacaaaattacaccaatttgattgaacatttacttgaagatgcattaaataaacaagca
ataagacactggacagtaacaaatgaaattaacaaattagaaaatcaattagcttctgca
aaatgtaaaatgcaagaagaaattaaaactgatcaagatatagaatctttcatggaaaaa
ctaaatacattaaagacacagaagaatcagatcctcaatgatttagtttatatcccaaat
cctgttatggtatatggcaaagcaaatgaattatgcagcaaattgtgcgatgaaactata
aaaaataagtttttagaaagtatttccaaaatgtggttagatgctactacataa
DBGET
integrated database retrieval system
