Bombus impatiens (common eastern bumble bee): 100740905
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Entry
100740905 CDS
T04362
Name
(RefSeq) collagen alpha-1(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
bim
Bombus impatiens (common eastern bumble bee)
Pathway
bim04382
Cornified envelope formation
bim04512
ECM-receptor interaction
bim04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bim00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100740905
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100740905
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
100740905
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bim04147
]
100740905
00536 Glycosaminoglycan binding proteins [BR:
bim00536
]
100740905
Exosome [BR:
bim04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
100740905
Glycosaminoglycan binding proteins [BR:
bim00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100740905
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
100740905
NCBI-ProteinID:
XP_003491890
UniProt:
A0A6P3DUI0
LinkDB
All DBs
Position
Unknown
AA seq
1839 aa
AA seq
DB search
MRPRAAATSTDAARGLRPFPVVLRVTCVLALLVVTWIPVTEAVICRDSYKCDCKGIKGTP
GFPGITGPQGPEGLPGDIGPDGPPGPKGEKGAAGEYGGTGEKGYRGDEGIRGFPGAPGIP
GNPGPEGVMGPDGLDGCNGTDGRAGAPGLPGMHGERGLPGPQGDPGIIGEPGDGGINSVG
VKGIRGNPGIDGLEGFQGSYGIPGEMGYPGERGDMGYRGPMGLPGMQGEVGETVYGAKGT
VGEQGDRGEPGPPSKDEYKKTDTMYYPVKGSRGEKGMRGDKGGYGRKGEPGMKGPHGRPG
FAGTKGMKGEQGNDGPRGKQGAIGPPGPSGEKGEKGAPGYAGKPGPDGLDGELGEPGNQG
PPGKQGAAGEPGQYIPELDEIIQGNIGIQGDLGPPGNPGEPGIPGLPGKVGYIGPPGPPG
PIGPPGSPGLKGSSIKGEPGQDGLTGEMGLQGPPGAPGIPGLAGPKGFPGISIHGPPGLD
GKPGYPGVPGLPGDRGDHGPQGPKGFPGKGSRIGGPPGERGLPGLPGLPGPDGFPGAPGF
KGVKGLKGDDCGVCTPGLAGRKGEPGDSGLDGYPGTPGYPGLSGLRGFKGVQGKRGIMGP
RGLEGDSGRPGIAGPQGPKGEMGKLTWPDKLTRMPGDIGDKGFPGVEGPRGPRGQPGSRG
DTGIQGPKGEKGDFGPPGFTGRDGFARPDGIPGLPGDNVSIPKEFLRGEPGFPGIPGGKG
PMGDKGGKGEPGESYPPPVINLKGEKGYKGERGDIGEDGAKGVEGWPGDEGFPGLPGISG
SPGISRQGPVGLKGYPGMPGDQGPRGTSGTPGSQGPMGFTGRLGNKGDRGEPGSNQTYGD
YGLMGWTGNKGDVGDPGPRGLQGRPGVDGVKGAKGSKGAPGQEGLTGLQGAKGQRGYSTQ
GPRGFPGMAGQPGMPGRMGDVGITGPYGTPGFDGMKGLKGEIGFMGRRGDDGDAGPMGYS
GRDGAPGQPGPPGPDGADGETGESGLSGRPGPDGMPGITGAKGQPGDVGPEGVIGIMGLP
GPKGISGDIGPDGLDGLPGESAFSGPQGEVGEPGFMGELGPPGFPGMDGRHGPPGEPGIG
RDGSPGPKGIKGETGFDGFNGLPGPKGEVGDMGPDGLKGPRGIWGLKGKPGAYGIHGLPG
VKGERGPIGPPGYSGPKGKRGLDGDPGQMGLPGMPGDPGPRGLPGLMGAPGPKGMVGEPG
PPSYGESERGDFGTPGLEGLQGEKGIRGEQGFIGLHGRKGMKGDMGFPGPVGFPGVPGFP
GLPGDRGPQGFPGLPGELAEPSEDGLPGLDGLPGTPGIPGQKGAPGEYGYNGPKGIMGDV
GFSTRGPKGLPGDRGPAGFTGFPGAPGLEGLEGIPGLQGPKGEPGDRGLPIFAIKGRQGE
PGLPGFNGIKGIKGEIGEMGIPGREGLPGRRGQRGDDGDEGLSGAMGLPGPKGPKGDNGI
NPFSPFPRKGLPGDAGLPGLPGFPGIQGITGEQGEDGIPGRKGEPGMEGLPGLPGPEGVV
GSPGYPGLRGAIGRQGPPGSPGMRGSPAPPAPGARNRGFFFARHSQSEMIPVCPRNTVKL
WDGFSFLHIMGEGYSVGQDLGTAGSCLQKFSTMPFTMCNLQNVCDYANKNDYSYWLSTTE
PMPMSMASIPAPEVGRYLSRCSVCEAPTRVIAVHSQSMAIPECPGGWEELWIGYSFLMHR
DAGGRGYGQSLVSPGSCLEEFRTRPFIECHGFGACNYYSTAISYWLTIIKEYEMFRRPIP
QTLKADHTSRVSRCAVCIRRRVTEDQHARTPRPFTPNGQRDQVGNIQYPPPHSYYPNYQY
HKKPPIGKTRDPNRRVPYHYRRRGRLRKPERTTESPNAA
NT seq
5520 nt
NT seq
+upstream
nt +downstream
nt
atgcggcctagggccgcggcgacgtcgaccgatgcagcccgcgggttacgtccgttcccg
gttgtcctgcgagtcacctgcgtccttgccctactggtcgtcacgtggataccggtcacc
gaggctgtgatctgcagagattcatacaaatgcgattgcaaggggataaaaggtacacca
ggtttccctggtatcactggacctcagggaccagaaggacttcctggtgacatcggacca
gatgggccacctggtccaaaaggtgaaaaaggtgctgctggagaatatggtggtacagga
gaaaagggctacaggggtgacgaaggtatacgaggattccctggagctccaggaataccg
ggtaatcccggtccagaaggtgtaatgggaccagacggtctggacggatgcaacgggacc
gatggacgtgccggtgcaccgggattgcctggtatgcatggcgaacgtggtctaccaggg
ccacaaggagatccagggatcattggcgagcctggtgacggaggtatcaattctgtgggc
gtgaaaggtattcgaggaaatccaggcatcgacggactcgagggctttcaaggatcgtat
gggatccccggcgaaatgggctatccaggagagaggggagacatgggttaccgcggaccc
atggggttaccaggcatgcaaggtgaagtgggtgaaactgtatatggcgcgaaaggtacg
gtaggtgaacaaggagacagaggagagcctggcccaccgagtaaagatgaatacaagaaa
acagacaccatgtactatccggtgaagggcagtaggggcgagaagggaatgcgaggagat
aaaggtggttatggaagaaagggagaacctggcatgaaaggtcctcacggtcgtccagga
ttcgctggtactaaaggtatgaaaggagagcaaggtaacgatggacctagaggcaaacag
ggtgcaataggtccgccaggaccttcgggagaaaagggagagaaaggggctccaggctac
gcgggaaaaccgggacccgatggattagatggagagctgggagagcccggaaaccaagga
ccacctggtaaacaaggagctgcgggagaacctggacaatacataccggaactggacgaa
ataattcaaggaaatattggaattcaaggagatctaggtccgcctggtaatccaggagaa
ccaggaataccaggtttacccggtaaagtaggttatatcgggccacctggtcctccagga
ccgatcggccctcctggatcgccaggactgaaaggatcttccatcaaaggagagccaggg
caagatggtcttaccggagaaatgggtttacaaggtccaccgggtgcaccgggtataccc
ggtctcgccggtccaaaaggttttcctggaatatcgatacacggcccaccaggcttagat
ggaaaacctggataccccggtgttcctggattaccgggagatcgtggtgaccatggcccc
caaggtcctaaaggtttccctgggaaaggaagcaggatcggaggccctccgggtgaacgt
ggtttaccaggacttccaggacttcctggacccgatggatttccaggtgcgccaggcttc
aaaggtgtaaaaggtcttaaaggagacgactgcggtgtttgtacgccaggcctagccggt
agaaagggtgaacctggcgattccggcctggacggatatcctggaacgccaggatacccg
ggattgtccgggcttcgtggattcaaaggtgtacagggtaaacggggtatcatgggaccc
agaggattggaaggagacagtggaagaccaggaatcgctggtcctcaaggtcctaaagga
gaaatgggaaaattgacatggccagacaaactaactagaatgcctggtgatatcggtgac
aagggtttccctggtgtcgaaggaccaagaggcccgcgaggtcaacctggtagtcgtggt
gacactggcattcaaggacctaagggagaaaagggtgattttggtcctccagggtttaca
ggacgcgacggtttcgccagaccggatggtattcctggtcttccgggtgacaacgtgtcg
ataccaaaagaatttcttcgaggtgagccgggtttcccgggcattccgggaggcaaaggt
ccaatgggcgacaaaggaggaaaaggcgaacccggagaatcttatccgccaccggttata
aatctgaaaggagagaaaggatacaaaggagaacgaggtgatataggagaggacggtgcg
aaaggtgtggaaggatggcctggtgacgaaggatttccgggactgcctggaatttctgga
tcacctggtatatcgcgtcagggtcctgtaggattaaaaggatatcccggtatgccagga
gatcaaggacctcgcggaacatcgggtacaccaggatcacaaggaccaatgggtttcacg
ggacgcttgggcaacaaaggagatcgcggagaaccaggatcaaaccagacgtatggcgat
tatggattaatgggctggactggtaacaagggagacgttggtgatcctggtcctagaggt
ttacaaggtagacccggagtggatggtgtgaaaggagcaaaaggtagcaaaggtgctcct
ggtcaagaaggattaactggactacagggagccaaaggtcaacgaggttacagtactcag
ggacctaggggcttccctggaatggctggacaacctggaatgcccggaagaatgggagac
gtcggtattacaggtccctacggaacacctggattcgatgggatgaagggtctgaaagga
gaaatcggtttcatgggacgcagaggtgacgacggtgatgctggaccgatgggctactca
ggaagagatggtgcaccgggtcaaccgggtcctcctggaccagacggtgccgatggtgaa
actggcgaatctggtctttctggtaggcctggtcccgacggaatgcctggaataactgga
gctaaaggacaaccgggagacgttggacccgaaggtgttataggaattatgggattacct
ggtccaaaaggtatatctggagacataggaccggacggtttggacggacttccgggtgaa
agcgcgttcagtggaccccaaggtgaggtgggtgagcctggtttcatgggagaactcgga
cctcctggcttccctggcatggatggacgtcatggcccacctggtgaaccaggaataggt
cgcgatggctcccctggtccgaagggaatcaaaggtgaaactggctttgacggatttaac
ggactacctggaccaaaaggagaggtgggtgatatgggaccggatggtttaaaagggcca
agaggaatttggggtttaaagggaaagcctggagcatacggtattcacggtttacctggt
gtgaagggtgaacgaggtccgataggaccacctggttacagcgggcctaaaggtaaacga
ggattggatggagatccaggtcaaatgggtttgccaggaatgcctggtgatccgggtcct
agaggattacccggtttaatgggtgcaccaggacccaaaggaatggtaggtgaaccaggt
cctccgtcgtacggtgaatcggaaaggggtgatttcggtactcccggcctcgaaggcttg
caaggtgaaaaaggaatacgcggtgaacaaggtttcatagggttacatggacgaaagggt
atgaaaggtgatatgggattccctgggccggtcggattcccaggcgtgccaggtttcccg
ggtcttcctggcgatcgaggacctcaaggtttcccaggattacccggtgagttggccgaa
ccatccgaggacggattacctggactagatggactacccgggactccaggaattccgggt
caaaagggtgcacccggagaatacggatataatggacctaaaggaattatgggagacgtt
ggtttcagtacgcgtggtccaaagggacttccaggggatcgaggtccagcaggtttcacg
ggtttccctggagctccaggattagaagggttagaaggcatacctggtctacaaggacca
aaaggtgaacctggcgaccgtggactgcctatattcgccatcaaaggaagacagggagaa
ccaggattgcctggatttaacggtataaaaggaataaagggagaaattggcgaaatgggc
attcctggacgcgaaggattacccggacgaagaggacaacgcggtgacgacggagacgaa
ggtttatccggtgcgatgggacttccaggaccaaaaggaccgaaaggagataatggtatt
aacccattctcgcctttcccaagaaaaggtttacccggtgatgcaggacttccaggactg
ccaggtttccctgggattcaaggcataacaggcgaacaaggagaagacggaattcccgga
agaaaaggagaaccaggaatggaaggacttcccggtcttccaggaccagaaggcgttgtt
ggttctcctggttatcctggtcttcgcggtgcaattggccgacaaggtccaccaggatcc
cccggaatgcggggaagtccggcaccgccggcaccaggtgcccgaaacagaggtttcttc
tttgctcgacactctcaatccgaaatgataccagtgtgtccaagaaatacagtgaaactt
tgggacggtttctcgtttttgcacataatgggcgaaggatattccgtcggacaggatctt
ggcaccgctggaagctgccttcaaaaattctccaccatgcctttcacgatgtgcaatttg
caaaacgtatgcgactacgccaataagaacgattacagctattggttgagcacgacagaa
cctatgcctatgtccatggcgtctataccggcaccggaagtcggaaggtacctgtccaga
tgttccgtttgcgaggctccaactcgagtgatcgcggtgcacagtcaatccatggctata
ccagagtgtcccggtggttgggaagaactttggatcggatacagtttcctcatgcatcga
gacgcaggcggacgcggatacggtcagtccttggtgtcccctggttcctgtctagaagaa
ttccgcacgagaccgttcatcgagtgccatggttttggcgcctgcaactattactccact
gccatatcctactggttaaccatcatcaaagagtacgagatgttccgcaggcctatacca
cagacgttgaaagccgatcacacgtcgcgagtaagtcgttgcgcggtgtgcattcgacgt
cgcgtgacggaagaccaacacgccagaacgccgagacctttcacgccgaatggacagaga
gaccaagtcggcaacattcagtatccaccgccgcattcatattatccaaactaccaatat
cacaagaaaccgcctataggcaaaacgagagatccgaatagacgcgttccgtatcactat
cgaagaagaggcagactacgtaaaccagaacgaacgacggaatcaccgaacgcggcttaa
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integrated database retrieval system
