Bombus impatiens (common eastern bumble bee): 100741316
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Entry
100741316 CDS
T04362
Name
(RefSeq) collagen alpha-2(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
bim
Bombus impatiens (common eastern bumble bee)
Pathway
bim04382
Cornified envelope formation
bim04512
ECM-receptor interaction
bim04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bim00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100741316
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100741316
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
100741316
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bim04147
]
100741316
00536 Glycosaminoglycan binding proteins [BR:
bim00536
]
100741316
Exosome [BR:
bim04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
100741316
Glycosaminoglycan binding proteins [BR:
bim00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100741316
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
CBM_14
Motif
Other DBs
NCBI-GeneID:
100741316
NCBI-ProteinID:
XP_012245566
LinkDB
All DBs
Position
Unknown
AA seq
1435 aa
AA seq
DB search
MWASLHTLGVLIALISPTLADIAKGLPSIHLPLPHLPSGFMCIEVGYHADPSDCRRFYRC
VDWGFGKPLQIFQFECGVGTVFSMRRGNICTLPNDSDRPECGGNIINNNNSTTTSPTTTG
TWATNGTVTNDILRTTSKTTTTSLSTSSNQFSATSGKPENDQGRGRCVQEGYFADLNNCR
KFYRCVEEGSGNLVKYEFECGVGTVWDPDIHGCNHPWAVSREDCKEGSGTAATGSGDNDG
QWTSGTGSPGQPGDATSQTGKPDQPGETTGQPVSPGTAATPGTPGTPGTPGTPGTPGTHG
TPDTSGGLGSTTTSITSGTPGVSGTPVTPSTSGTPGIPGTPETPVTSGTSGAPGKPGIPG
SVGTPITPGSSGAPGTSSTPGTSGTPGTSGTPGTSGTASTSGTPSKPGTPDTAGTPGTPG
ISGNPGTSSVPASPEAPHTPGSPGAPGTPATPGIPGSPGAPGTPGSPGTPGTPGTSGTPG
TPDTPGTPGIPGNSGTPSIPGSPGAPDTPDSTGTPGTPATPGIPGSPGAPGTPGSPGTPS
TSGTASTSGTPGTPGTPGTPGTSGTSGTPGTPGTPGIPGNSGTPSIPGSPGAPDTPGATG
TPGTPGTPGTPGTPGTPGIPGNSGTPSIPGSPGAPDTPGATGTPGTPGTPGTPGTPGTPG
IPGNSGTPSIPGSTGSPGAPGTPDSPGTPGTSGTASTSGTPGTPGTSGTPGTSGTPGTPG
TPGTPGTPGTPGTPGTPGTPGIPGNSGTPSIPGSPGAPGTPGSPGTPGTSGTASTSGTPG
TPGTPGTPGTSGTSGTPGTPGTPGIPGNSGTPSIPGSPGSPGTPGTPGTSGTSGTPGTPG
TPGIPGNSGTPSIPGSPGAPGTPGSPGTSGTSGTSGTPGIPGNSDTPSIPGSPSAPGTPG
LPGTPDTPGISGTSGITGTAATNGTPGTPAWLVSSSTSAWFDSSGQPSTSGSPIYLGSPT
TPEITSTTPTPIITEAPNTLSTPSTPSNYETPQTPATPSSGNGTTAITDTPSESDTSDTP
GSSSEPDTADTPGSSSEPDTAQTPGSSSEPDTADTPGSSSEPDTADTPGSSSEPDTADTP
GSSSEPDTADTPRTNNDPDNSGSSGTPNESETASTSSEHDFPDTSGESVTDSGTANTSSS
PETSVTQATSDGEPPCTPDTTSKPPTPRTPSNPESPETPATPNSEIGFPPTPSILSKPPT
PRTPRHLKTTRKLTTRSSKTIPPPTATMASKAPTPRTPSHLKSPETLATPWRESTPHATP
TMAIKPPTPRTPIHLKDTGKPTTRSSRTILFPTPTMASKLPTPRTPSHFKTPETPATRSN
ETTSPPTPDMATKPPTPRTPGHLETTGKPPTPRAPSHFKTPETPATHSNETAPPSTSGIV
SKPPTPRTPSHLTATEKRATRNSKTIPPPTHATASNPPTPRTPNHLKSPETPTTP
NT seq
4306 nt
NT seq
+upstream
nt +downstream
nt
atgtgggcaagtctacatacgttaggcgttttgatagcgctgatctcgccgacgttagct
gatattgcaaaaggtctgccctcgatacatctgcccttgccacatctaccgagtggtttc
atgtgcattgaagtaggatatcatgccgatcctagcgactgtagaagattctaccgatgt
gtcgattggggattcggaaaaccgctgcagatctttcaattcgagtgcggtgttggaaca
gtattctcgatgcgcaggggtaacatctgtactctccccaacgacagcgatcgcccagag
tgtggtggaaatatcataaacaacaataattcgactacgacatctccgactacaacagga
acatgggcgaccaatggaactgttacaaacgatatactgcgaacaacttcgaagactact
accacaagtttatcaacaagtagtaaccaattttctgcaacaagcggaaaaccagagaat
gatcaaggtcgaggacgatgcgttcaagaaggatattttgctgatttgaataactgtaga
aaattttatagatgcgttgaagaaggttctggaaacttagtaaagtatgaatttgaatgt
ggagttggtacggtctgggatccagatatacatggatgtaatcatccttgggctgtatca
cgagaagattgcaaggaaggatcagggacagccgctactggtagtggcgataatgatgga
caatggacaagcggaacaggcagccctggacaacctggagacgctactagtcaaacagga
aaaccagatcagccgggagaaactactggacaacctgtttctcccggtactgcggcaaca
cctggtacccctggcactccggggacacctggtactccgggcactccgggaacacatggc
acccctgatacttctggcggtctaggatctactacaacttccatcacttcaggtacacct
ggcgtctcgggaactcctgttacacctagcacctctggaactcctggtatacctggcacc
cctgaaactcctgttacatctggcacttcaggagctcctggtaaacctggcatacctggg
agcgtaggcacccctatcactccaggaagttctggtgcccctggcacatctagcacacca
ggcacatctggcacaccgggcacatctggcacaccgggtacatctggcacagcgagcaca
tctggcacacccagtaaacctggcacacctgacacagctggcacacctggcacacccggc
atatccggaaacccaggcacttctagcgttccagcaagtcctgaggccccacacactcct
ggctcacccggcgctcccggtactcctgccacacctggaatcccaggtagtcctggtgcc
ccaggtactcctggctcacctggcacacctggtacacctggcacatctggcacacctggt
acacctgacacacctggtacacccggcatacctggaaactcaggcactccaagcattcca
ggtagtcctggtgccccagacacccccgactcaaccggcacacctggtactcctgccaca
cctggaattccaggaagtcctggtgccccaggcactcccggctcacccggcacacccagc
acatctggcacagcgagcacatctggcacacccggtacaccaggcacacctggtacacct
ggcacatctggcacatctggtacacctggcacacctggtacacccggcatacctggaaac
tcaggcactccaagcattccaggtagtcctggtgccccagacactcccggcgcaaccggc
acacctggtactcctggcacacctggtactcctggcacacctggtacacccggcatacct
ggaaactcaggcactccaagcattccaggtagtcctggtgccccagacactcccggcgca
accggcacacctggtactcctggcacacctggtactcctggcacacctggtacacccggc
atacctggaaactcaggcactccaagcattccaggcagtactggaagtcccggtgcacca
ggcactcctgactcgcccggcacacccggcacatctggcacagcgagcacatctggcaca
cccggtacaccaggcacatctggtacacctggcacatctggtacacctggcacacctggt
acacctggcacacctggtacacctggcacacctggtacacccggcacacctggtacaccc
ggcatacctggaaactcaggcactccaagcattccaggaagtcctggtgccccaggcact
cccggttcacccggcacacccggcacatctggcacagcgagcacatctggcacacccggt
acaccaggcacacctggtacacctggcacatctggcacatctggtacacctggcacacct
ggtacacccggcatacctggaaactcaggcactccaagcattccaggtagtcctggaagt
cccggcacacctggtacacctggcacatctggcacatctggtacacctggcacacctggt
acacccggcatacctggaaactcaggcactccaagcattccaggaagtcccggtgcacca
ggcactcctggctcacccggcacatctggtacttctggcacatctggtacacccggcata
cctggaaactcagacactccaagcattccaggaagtcctagtgccccaggcactcctggc
ttacccggcacacctgatactcctggtatatctggaacatcgggcatcacaggtactgcg
gccactaacggtacccccggtacaccagcatggcttgtctcatccagcacatctgcatgg
tttgactcatccggacaacctagcacctcaggatcacccatatacctcggaagtcctacc
actcccgaaattactagtacgacacccacacctatcataacagaagcacccaacactctc
agcactccaagcacgccaagtaattacgaaactcctcaaacaccagcaacaccaagtagt
ggaaatggaacaaccgctataactgacactcctagtgaatctgacacttcagacactcct
ggctcttctagtgaacccgacactgcagacactcctggctcttctagtgaacccgacaca
gcacaaactcctggctcttctagtgaacccgacactgcagacactcctggctcttctagt
gaacccgacactgcagacactcctggctcttctagtgaacccgacactgcagacactcct
ggctcttctagtgaacccgacactgcagacactccacgcactaataatgacccagataat
tcaggctcctccgggacacctaatgaatccgagactgcaagtacttctagtgaacacgat
tttccagacacatctggtgaatctgtaactgactccggtactgcaaacacatccagttct
cccgaaacatctgttacacaagcgacatccgacggcgaacctccttgtacgcctgataca
accagtaaacctccaactcccaggacaccaagtaatcccgaaagtcctgaaacaccagcg
acacccaatagtgaaattggattccctcctacacccagtatactcagtaaacccccaact
cccaggacgccacgtcatctcaaaactactagaaaactgacgacacgtagtagtaaaact
atacctcctcctacagccacaatggccagtaaagcaccaactcccaggacaccaagtcat
ctcaaatctcccgaaacactagcgacaccgtggagagaaagtacacctcatgccacaccc
acaatggccattaaacctccaactcccaggacgccaattcatctcaaagatactggaaaa
ccgacgacacgcagtagtagaactatactttttcctacacctactatggccagtaaactt
ccaacgcccaggacgccaagtcatttcaaaactcctgaaacaccagcgacacgcagtaat
gaaactacatctcctcccacacctgatatggccactaaacctccgactcccagaactcca
ggtcatctcgaaactactggtaaacctccaacgcccagggcgccaagtcatttcaaaact
cctgaaacaccagcgacacacagtaatgaaactgcacctccttccacatcgggtatagtc
agtaaacctccaactcccaggacgccaagtcatctcacggctactgaaaagcgggcgaca
cgcaatagtaaaactatacctcctcctacacacgctacggccagtaatcctccaactccc
aggacaccaaatcatctcaaatctcccgaaacaccaacgacaccga
DBGET
integrated database retrieval system
