Bombus impatiens (common eastern bumble bee): 100741396
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Entry
100741396 CDS
T04362
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog isoform X1
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
bim
Bombus impatiens (common eastern bumble bee)
Pathway
bim04140
Autophagy - animal
bim04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
bim00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100741396
04148 Efferocytosis
100741396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bim04131
]
100741396
Membrane trafficking [BR:
bim04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
100741396
Hops complex
100741396
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-C3HC4_2
zf-RING_5
zf-RING_11
zf-C3H2C3
zf_RING_Vps8
zf-RING_16
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-RING_Vps41
zf_RING_Vps8_fungal
COMP
zf-rbx1
Occludin_ELL
Motif
Other DBs
NCBI-GeneID:
100741396
NCBI-ProteinID:
XP_003493052
UniProt:
A0A6P3DW05
LinkDB
All DBs
Position
Unknown
AA seq
1002 aa
AA seq
DB search
MTSMFDQYEQASQRSKQVYTPPIRPDISTAGFIQMKFLDDGPIFIKQKVNFLPPDKILHL
VVNNNIIVIAMANNLLLRIDMKHPDSPEEIDISKYAMNMEMSRMFLDPLGNHLLISLVPK
SQDPPNPPPELFYLHRKTTKLKQAGKFKGHEITAIGWNFSNSSETTTGPILLGTSKGLIF
ETEIGLDGDKIFNTSLEQYWRQLPNYLPLYGAKEVEGLVFDIGKDSKPPITGLEFHKIPN
TDKYVIIVTTLMRIYQYIGAVQNPEEKPLLQQIFNKYLNVQESFNEVINNLPYSKIQFYY
PSLGILPKSFGWLTEPGIFYAQIDPKIDPKSVLTNQQMLICPEASLMGINTSQTSTPPLS
FVLTEFHALLLYTDRVKGMSLLNQDLIFEDIYNDAVGGLLNITKDYATRSIWAYSERAVF
KYKVNKEDRNVWQIYVDKGEFELAKQYCKDNPAHIDQVLVKQAEMLFKNKEYEKSALIYA
DTHSSFEVISLKFLQEWQIDALKTFLKKKLEGLKTQDKTQITMIVVWVIELFMNQMGVLR
SNNTSYLHDPQYLELQKQFDSFLAIPKVEECIKRNRSTIYDLMASHGDKDNLIRLTIMHC
NYEEVIRQHLYKNNYLDALEVLKSQNNKELFYQFAGILLQELPRPAMTALISQGSLLKPS
KLLPALVSCNSDEKHAKEVIRYLEFCVYKQSCQEQAIHNFLLSLYARYKRDEVMRYISSQ
GQDINMVHYDVHYALRLCQEVGLTEACVQLSALLGLWTTAVDLALTINVDLAKQIAAMPS
DHDDELRKKLWLKIAEHVVREKDDIQQAMEFLQHCDIVRIEDILPFFSDFVTIDHFKDAI
CNSLQEYNQHIQDLKEEMQEATKAAELIRKDIQEFRTRCTFINTKDTCNTCGVQLLLRPF
YVFPCGHRFHSDCLVAALTPMLSMDQRTKLADLQRQLTALSNRPEDTRSVRSVSLSTKDQ
IKADIDDLIASECLYCGELMIESIDKPFIEEEDYERVMKEWI
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaatgtttgatcagtatgaacaagcatctcaaagatcaaaacaagtatataca
ccaccaattcgtccagatataagtactgctggatttatccaaatgaaatttctagatgat
ggcccaatttttattaaacaaaaagttaactttttaccaccggacaaaattttacatctt
gttgttaacaataatatcattgttattgccatggctaataatctcctcttacgtattgac
atgaaacatccagattcacctgaagagattgatatatctaaatatgcaatgaatatggaa
atgtcaagaatgttccttgatcctttaggtaatcacttgttgatatctctagttccaaaa
tctcaagatcctcctaaccctccccctgaattattttatttacacagaaaaacaacaaaa
ttaaaacaggcaggtaaattcaaaggacatgagattactgccattggatggaacttttca
aattcttccgaaactactacaggtccaattctcttaggaacttcaaaaggcctcattttt
gaaacagaaattggtttagatggtgataaaatatttaatacaagcctggaacaatattgg
cgtcagcttcctaactatttacctctttatggtgctaaagaggtagaaggattggtattt
gatatagggaaagatagtaaaccaccaattactggtttggagtttcataaaataccaaat
actgacaaatatgtgattattgttactactcttatgcgaatttatcaatatattggagca
gtacaaaatccagaagaaaaacctttattacaacaaatttttaacaaatatttgaatgta
caagagagcttcaatgaagtaataaataatttgccttattctaaaattcaattttattat
ccttcacttggtatattaccaaaatcgtttggttggttaaccgaacctggtatattttat
gctcagattgatccaaaaatagatccaaaaagtgtgttaacaaatcaacaaatgttaatt
tgtcctgaggcaagtctaatggggatcaatacctcacaaacaagtactccaccattatct
tttgttttaacagaatttcatgccttattactttatacagaccgtgtaaaaggcatgtcg
cttttgaatcaggatttgatattcgaagacatttataatgatgcagtggggggattactt
aatattactaaagattatgcaacacgttccatatgggcttatagtgaaagagcagtattt
aaatataaagttaataaagaagatagaaatgtttggcagatctacgttgataaaggtgaa
tttgaacttgcgaaacaatattgtaaagataatccagcacatatagatcaagtgcttgta
aagcaagcagaaatgctttttaagaataaggaatatgaaaaaagtgctctcatctatgca
gatactcattcgtcatttgaagtaatttccttaaaatttctacaggaatggcaaatagac
gctttaaagacatttcttaaaaagaaacttgaaggattaaaaacacaagataaaacgcaa
ataaccatgattgttgtatgggtaattgaactatttatgaatcaaatgggtgtattacgg
agtaacaatacatcatatttacatgatccacaatatctagaattacaaaaacaatttgat
agctttcttgcaataccaaaagttgaggaatgtataaaaagaaatcgtagcactatatat
gatttaatggcaagtcatggtgataaagacaatcttattcgtttaactataatgcattgc
aactatgaagaagtgatacgtcagcatttatataaaaataattatttagatgctcttgaa
gttctgaaaagccaaaataataaagagctattttatcagtttgctggtattcttttacaa
gaattaccacgccctgcaatgactgctctaatatcacagggatctttattaaagccatct
aagcttctaccagctttagtatcttgtaatagtgatgaaaaacatgcaaaagaagtaatc
agatacttagaattttgcgtttataaacaaagttgtcaagaacaggcaattcacaatttt
ctattatctttatatgctcgttataaacgagacgaagtaatgcgttatattagctcgcaa
ggtcaagatataaatatggtacattatgatgtgcattatgcattacgattgtgccaagag
gttggcttaacagaagcttgtgtacagttgtctgctttgcttggattgtggacaacagca
gttgatttagctttaacaattaatgttgatcttgctaaacaaatagctgctatgccctcc
gatcatgatgatgaattaaggaaaaagttatggttgaaaattgctgaacacgtagttcga
gaaaaagatgacatacagcaagcaatggaatttttgcagcattgcgatatagtcagaata
gaagatatattacctttcttttcagattttgttactatagatcactttaaagatgcgatt
tgcaattcattgcaggaatataaccaacatattcaagatttaaaagaagaaatgcaagaa
gcaacaaaagcagcagaacttattaggaaagatatacaagagttcagaacgaggtgcaca
tttataaatacaaaagatacatgtaatacttgtggtgttcaattactactacgacctttt
tacgtatttccatgtggacacagatttcatagtgattgccttgtagctgcattaacacct
atgttgtcaatggatcagagaacgaagctagctgatcttcaaagacaactcactgctctt
tcaaatagacctgaagatactagatcagtcagatctgtatctttatctacaaaagatcaa
atcaaggctgacattgatgacttaatagcatctgaatgtttatattgtggagaactaatg
atagagtctatagataaaccgtttattgaagaagaggattatgagagagtgatgaaagaa
tggatatga
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integrated database retrieval system
