Bombus impatiens (common eastern bumble bee): 100741454
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Entry
100741454 CDS
T04362
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
bim
Bombus impatiens (common eastern bumble bee)
Pathway
bim03030
DNA replication
bim03410
Base excision repair
bim03420
Nucleotide excision repair
bim03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100741454
03410 Base excision repair
100741454
03420 Nucleotide excision repair
100741454
03430 Mismatch repair
100741454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bim03032
]
100741454
03400 DNA repair and recombination proteins [BR:
bim03400
]
100741454
DNA replication proteins [BR:
bim03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
100741454
DNA repair and recombination proteins [BR:
bim03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
100741454
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA
AAA_lid_RFC1
BRCT
BRCT_2
Rad17
AAA_22
AAA_30
AAA_14
RuvB_N
PTCB-BRCT
AAA_assoc_2
AAA_19
RNA_helicase
NTPase_1
AAA_33
AAA_7
AAA_5
AAA_16
AAA_11
Motif
Other DBs
NCBI-GeneID:
100741454
NCBI-ProteinID:
XP_012236348
UniProt:
A0A6P3ULT5
LinkDB
All DBs
Position
Unknown
AA seq
1051 aa
AA seq
DB search
MPRDIRSYFQTIKTNSNVAPAKATKKRIIISSDEDEDKSQSPRKRPKKTKLLEKKAIKSD
SNEDIKIISPADMFGKNPVNRQEATKISRQSLKQKAAEVPKISKKLQKKEAEGHNDDDFE
ATLRQLDTSDIEQRYLTEIKVNEDTSLHESSIENKEKTPIKNKEDVKKKTRPDKTNQEKD
NKEHEPKNKKHSNNISDEDIKHKGSENSSKFKHTKKSSKTSSAISKMEVEYLKEKNETSP
KKIDTSDVYEEKIEKKKQNAAMYQQYLQRGGARNPGSKEIPVGAEQCLTGLSFVITGVLD
SLEREEAEELIKQYGGRILHQISKKTDYVIVGDQAGPAKLSKATNLNIKKISEDDLLELI
RTRPAGQSDNVTQPRTKSKERSKRKFAESSEESTPKKKKITVNEETKKAAKVHSPHKTES
SKREIEDSLKQELYNKDEKIKSSIEKKQNEYKESLVQDKKEIIDVKDIKIQMNSLQDISG
NIPVQALVEKYRPKTMKQILGQQGDKSNAKKIHTWLMNWHKNQSGQVKHTRPGPWAKDDN
GAFFKAALLSGPPGIGKTTTVQVVCNELGFDLIEFNASDTRSKKLLQEEVSELLSNTTIK
NYFKDVKSKPSSKHVLLMDEVDGMAGNEDRGGLQELITLIKSTDIPIVCICNDRNNPKMR
TLSNYTFDLRFPKPRLEQIRGAMKSMCFKENIQISNEDLDRLIESTNQDIRQVINHLALF
VGQTGSQEKNEKKHINKDLRLGPWDVVKKVFSVEEHKHMSISDKSNLFFHDYNIAPLFVQ
ENYLMVIPQVPKNELLGRVAESAESIALGDVVEKSIRSNNAWSLLPIQAYYSSVIPGTAM
SGHIGGQINFPAWLGRNSKTGKLNRLMQEITLHARLATGASKEAINLDYIRPLRNTILRP
LAVGGIENVDTAIDVMNHYHLLREDLDSLVEISLWPGDRDPFQIIDSKVKAAFTRAYNKS
SVALPYIVSGTSKKKVTSSIQEEGFLEEEEEEIDSDQNDDNLDADKMIKAKKAGINKNTE
SKGKNTDKTEKKGKNSSDKSNKRGRGRGKAK
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgccaagagatatacgatcctattttcaaactattaaaacaaattccaatgttgctcca
gcgaaagctaccaaaaaacgaattattatttcgtctgacgaagatgaggacaaatctcaa
tcgccacgtaaacggcccaagaagacaaagttattggagaagaaagctattaaatctgat
tccaatgaagatattaaaatcatttctcctgctgatatgtttggtaaaaatccagtaaac
agacaagaagcaactaagatatctagacagtcattaaagcagaaagctgcagaagtacct
aagatatctaaaaagttacaaaagaaggaggctgaaggtcataatgatgatgattttgaa
gctaccttacgtcagttagatacatctgatattgagcagagatatttaacagagattaaa
gttaatgaagatacaagtttacatgaaagcagtattgaaaataaagaaaagacacccatt
aaaaataaagaggatgttaaaaagaaaacaagacctgataaaacaaatcaagaaaaggat
aataaagaacatgaaccaaagaataaaaaacattctaataatatttcagacgaggacatt
aagcataaggggtctgaaaatagtagcaaatttaaacatacaaagaaatcttctaaaact
tcatctgctatttctaagatggaagtagaatatctgaaagaaaaaaacgaaacttctccc
aaaaagatagacacttctgatgtatatgaggaaaagattgaaaagaaaaaacaaaatgct
gcaatgtatcagcaatatcttcaaagaggaggagccagaaatccaggctcaaaagaaatc
cctgttggtgctgaacagtgtctaacaggattaagttttgtaataactggcgttttggat
tctttagaaagagaagaagctgaagaacttattaaacaatatggtggacgaattttacac
caaatttcaaagaagactgactatgttatagtaggtgaccaagctggtcctgcaaaactg
tcaaaggctaccaacttaaacataaaaaaaatatcagaagatgatttgcttgagctgata
cgtacaaggcctgcaggtcaaagtgataatgtaacacaacctcgtacaaaatcaaaagaa
agatcaaagagaaaatttgcagaatctagcgaagagtcaacaccaaagaagaaaaaaatt
actgtaaacgaggaaacgaaaaaagcagcaaaagtacattcaccacataaaaccgaaagt
agtaaaagagaaattgaggactcattaaaacaagaactttataataaggatgaaaaaata
aaatcttcaattgaaaagaaacagaatgaatataaagaatcgcttgtacaggataaaaaa
gaaataattgatgtgaaagatataaaaatacaaatgaatagtttgcaagatataagtggg
aacataccagtacaggcattggttgagaaatataggccaaaaactatgaaacaaattttg
gggcaacaaggggacaaaagtaatgctaagaaaatacacacttggttaatgaattggcat
aaaaatcaaagtggtcaagtgaaacatacaagacctggtccttgggcaaaagatgataat
ggagcttttttcaaagctgctttgttatctggtcctcctggaattgggaaaaccacaact
gtccaagttgtctgtaatgaattaggttttgatcttatagaatttaatgcatcagatacc
agaagcaaaaaacttctgcaagaagaagtatcagaacttttatctaataccacaataaaa
aattattttaaagatgttaaaagcaaaccatcatcgaaacacgtattgttaatggatgaa
gtagatggaatggctggtaacgaggatcgcggtggtctacaggaattaattactttgatc
aaatcaactgatatacctattgtttgtatttgcaatgatcgaaataatcctaaaatgaga
acgctttctaattatacatttgaccttcgatttccaaaacctagattggaacaaattagg
ggtgcgatgaaatctatgtgttttaaagaaaatattcaaatttcgaatgaagatctcgat
cgtttaattgaatcaactaatcaggatattcgtcaagttataaatcatttggcattattt
gttggacaaactggttctcaggaaaaaaatgaaaagaaacatataaataaggatttgaga
ttaggtccttgggatgttgtaaaaaaagtattttccgtagaagaacataaacatatgagt
ataagtgacaaaagtaacttatttttccatgattacaatatagcaccattatttgtacaa
gaaaattacttgatggttatacctcaagtgccaaaaaatgaattgttagggagggtagca
gaaagtgctgaaagtatagcattaggagatgtagttgaaaaatccataagaagtaataat
gcttggtctcttttaccaatacaagcttattattcttctgtaatacctggaacagcaatg
tctggtcacattggtggtcaaattaattttccagcttggcttggacgtaattcaaaaact
ggtaaacttaatcgcttaatgcaggaaatcactttacatgcacgtttggctacgggtgcg
agtaaggaggctataaacttggactacattagacctcttagaaatactattctcagacct
ttagcagttggaggtattgaaaatgtagatacagcaattgatgttatgaaccactatcat
ttactcagagaagatctagattcattggtagaaatttctctatggcctggtgatcgtgat
ccgtttcaaattatagatagtaaggtgaaagctgcttttacaagagcatataataaaagt
tctgtggctctaccttatatagtgagtggaacatcaaagaaaaaagtaacatcaagtata
caagaagaaggtttcttagaagaggaggaagaagaaattgactctgatcaaaacgacgat
aaccttgatgcagataagatgattaaggcaaagaaagctggtataaacaagaatactgaa
tcaaagggtaaaaatactgataaaactgagaagaaaggcaaaaatagtagtgataagtct
aataaacgtggaagaggacgggggaaagcaaaataa
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