Entry |
|
Name |
(RefSeq) probable ribonuclease ZC3H12C isoform X1
|
KO |
K18668 | ribonuclease ZC3H12 [EC:3.1.-.-] |
|
Organism |
bim Bombus impatiens (common eastern bumble bee)
|
Brite |
KEGG Orthology (KO) [BR:bim00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:bim03019]
100741497
Messenger RNA biogenesis [BR:bim03019]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
100741497
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
675 aa
MICIHNSICTDSRRSLDAKGYDRLQFVEGDMTVAGKKYVDCTVLETESIADAEDSSYDSD
YEAEDSVGSTNIHSQVELQVSTSSHSDVSRTASDTLAAEFAEYVTVQGSPPVQSPGYTAR
VEFALKLGYTERLVQTALEKLGPDPEQNELLAELIKLGASCSQKSVDTPEEPDNVADTDL
MSNENSGCSSSLRSVVIDGSNVAMSHGNKEIFSCRGIKICVDWFKARGHKEITVFVPKWR
KETSRIDNPIADQEILGELERDRLLVFTPSRLVGGKRMVCYDDRYILKLAAEIDGIVVSN
DNYRDLAQENPEFRKVVEERILMYTFVNDRFMPPDDPLGRSGPTLDNFLRTFPKKSDPAP
PCPYAKKCTYGNKCKFRHPERGLHPQKSVTEKLVEHVQKQLQVRGSSPNVFLSSNISTNA
FQHQPLCKTKSTVTTSIQPLPSVTKSRSAENVTLDQPMNSTIHGLQVPPTTSSQGYRSSC
RSTGRLNKPEAEPPNIHKKLQRQLTLNPVYDPRLHQLRQYQQASQTSSLSQQTAITSSTA
QHRALSRHSSNESAYRAGMNWDRSEGGQCHQHVTRIASAPDSYQAWLSNNSNLAVPSGSS
QRLGASDSQLNVPTSPLYSAMPTDMLRDFLDTRTKIHYHLANIFPEEHVRTAMLIHPFET
DPIEICVAILKMYPQ |
NT seq |
2028 nt +upstreamnt +downstreamnt
atgatttgtatacataatagtatttgtacggattcgagaaggtctttggacgcgaaagga
tacgatcgattacaattcgtggaaggagatatgaccgtcgccggaaagaaatacgtagat
tgtaccgtcctggaaactgaaagtattgctgacgcagaagattcttcttacgatagcgac
tacgaagctgaagattcagtgggatctacgaatattcattcacaagtggaattgcaggta
tctacgtcaagtcattcagatgtgtcccggaccgcctcagatacgttggctgctgaattt
gcagaatatgttacagtgcaaggaagtccaccggttcagagtccagggtacactgcccga
gtagaattcgcccttaagcttggctacacggaacgtttggttcaaacagcgctggaaaaa
ttgggtccagatccggaacaaaacgaacttttggctgagttgataaaactcggtgctagc
tgttctcaaaagtcagttgatacgccagaggagcctgataacgtcgcggacactgattta
atgtccaatgaaaacagcggatgctctagcagtctcagatctgttgtaattgatggaagc
aatgtggcgatgagtcatggaaacaaggaaatattttcttgtagaggaattaaaatttgc
gtggattggtttaaagctcgagggcacaaagaaattaccgtatttgtgccgaagtggcga
aaggaaacttccaggattgataatccgatcgccgaccaagaaattttgggagaattggaa
agggaccgtttgttggtttttactccatccagattagttggtgggaaaagaatggtttgt
tacgatgatcgctatattttgaaactagcagcggaaatcgatggtattgttgtcagcaat
gataattacagagatttggcacaggaaaatccggaatttcgaaaagttgtggaagaaaga
attttgatgtatactttcgtaaatgatcgctttatgccaccagacgatccactaggtaga
agcggtcccactttagacaattttttgagaacttttcccaaaaaatctgatccagcacca
ccttgtccatacgcgaagaaatgcacttatggaaataagtgtaaatttcgacatccagaa
agaggtcttcatcctcaaaaatcagttacagagaagttagtggaacatgtacaaaagcag
cttcaagtaagaggttcaagtccaaatgtatttttatccagcaatatatcgaccaatgcg
tttcaacatcaaccgctttgtaaaaccaaatcaacggtaactaccagtatccaaccatta
ccttcggttacaaaaagcagatctgcagaaaatgtcacgcttgatcaaccaatgaattcc
acgatacatggtttacaagtgccacctaccacaagttctcaaggttatcgttcttcctgt
cgatcgacaggaagattgaataaaccagaagcagagccaccaaatatacataagaaactg
cagaggcagttaactttaaatccagtgtacgatcctcgacttcaccagctgagacaatac
cagcaagcgtctcaaacaagttcattatcgcaacaaactgcgataacatcttctacagca
cagcacagagccttaagtagacattctagtaacgaatcagcctacagagctggcatgaat
tgggatcgttctgaaggagggcagtgtcatcaacacgtaacacgtattgcttcggcgcct
gattcttaccaagcttggttatcaaataattcaaacttggctgtaccatcaggatcgagt
caacggctgggtgcttcagattcacagttaaatgtccctacatctcccttgtattcggct
atgcctacggatatgttaagggattttctcgataccagaacaaaaatacattaccatttg
gcaaatatctttcccgaagaacacgtgagaactgctatgctaattcatccatttgaaaca
gatccaatagaaatctgtgttgctattttgaaaatgtatccccaataa |