Bombus impatiens (common eastern bumble bee): 100741692
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Entry
100741692 CDS
T04362
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
bim
Bombus impatiens (common eastern bumble bee)
Pathway
bim03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bim00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100741692
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bim03041
]
100741692
Enzymes [BR:
bim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100741692
Spliceosome [BR:
bim03041
]
Complex C
Other components
Step II factors
100741692
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
AAA_30
AAA_16
PhoH
Motif
Other DBs
NCBI-GeneID:
100741692
NCBI-ProteinID:
XP_003486410
UniProt:
A0A6P3DRU6
LinkDB
All DBs
Position
Unknown
AA seq
1197 aa
AA seq
DB search
MDEVAKLEHLSLVSKICTELENHLGLNDKDLAEFIIHLAEKNDTFDKFKKVLIENGAEFS
ESFMANLLRIIQHMKPTKLEEKSLKPPTKQDELAQKFPALALPNEEPKIVDEKELKDDDI
VSSAMASLEELAPSKKSNKEDSKKENQSIDNNDKKNKHARRSRSRDRRRHRSRSSGRRDR
RHRSRSRSRSRDRSRSRDRRRHRSRDRKRSRSRDRKFHRDKYSNKLDRSRSRSVEELSMD
PEVGKIYSGKVANIVPFGCFVQLEGLKRRWEGLVHISQLRREGRVASASDVVSRGQKVLV
KVLNIGGQKVSLSMKDVDQETGRDLNPVVAVTKTEEDEKHLRNPDRPTSLLELQGNWDED
ETYSRKRVQRLSSPEKWEIKQMLAASCIDRSELPEFDTETGILPREDDEEEDVEIELVEE
EPPFLHGHGRALGDLSPVRIVKNPDGSLAQAAMMQSALAKERREQKMLQREQEMDSVPTG
LNKNWIDPLPEAESRTLAANMRGIGLQTQDLPEWKKHVIGGKKSSFGKKTNLTLLEQRQS
LPIYKLRDDLVKAVTDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVAAM
SVAKRVAEEFGCRLGQEVGYTIRFEDCTGPETNIKYMTDGMLLRECLMDLDLKTYSVIML
DEAHERTIHTDVLFGLLKQAVGRRPDLKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFEV
EVMYTKEPETDYLDAALITVMQIHLREPPGDILLFLTGQEEIDTACEILYERMKSLGPDV
PELIILPVYSALPSEMQTRIFEPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKV
YNSKTGMDSLIVTPISQAAAKQRAGRAGRTGPGKCYRLYTERAYRDEMLPTPVPEIQRTN
LATTVLQLKTMGINDLLHFDFMDAPPVESLIMALESLHSLSALDNEGLLTRLGRRMAEFP
LEPNLSKMLIMSVHLQCSDEILTIVSMLSVQNVFYRPKDKQALADQKKAKFNQPEGDHLT
LLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGKNTVRIQ
KAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYMRE
VTTIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLYNKYEEPNAWRISRVRRRRN
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagttgcaaagctcgaacacctgtctttggtttcgaaaatatgcacggaattg
gaaaatcacttagggctaaatgacaaagatttggctgaattcataatccatttggcagag
aaaaatgatacatttgataaatttaaaaaagttctcattgaaaatggtgctgaattttct
gaatcttttatggccaatttgctaagaataatacaacatatgaagccaactaaattggag
gagaaatcattgaaacctccgacaaagcaagatgaactagctcaaaaattccctgcccta
gcactgccaaacgaggaaccaaaaattgtggatgaaaaagaactcaaagacgatgatata
gtcagcagtgctatggcaagtttggaggaactagcaccatcaaaaaagtctaacaaagaa
gatagcaagaaagaaaaccaatcaatcgataataatgataagaagaacaaacacgcaaga
agaagtagatcaagagatagaagaagacacagatcacgttcatcaggtcgcagagacaga
aggcataggtctagatctcgttcaaggtcacgagatcgttcaagatccagagatagaaga
cgtcacaggtccagagatcgtaaaagatctagatcacgagacagaaaatttcatagggac
aaatattccaataaacttgatcgatctagatcgcgatctgtagaagaactttccatggat
ccagaagtaggcaagatctattcaggcaaagtagctaatatcgtaccttttggttgtttt
gttcaattggagggtttgaaacgaaggtgggaagggcttgttcatatctcacaattaaga
agggaaggaagagtcgccagtgctagcgatgtagtatctaggggtcagaaggtgctcgtg
aaagtcctcaatattggtggacaaaaggtttctttaagtatgaaggatgttgatcaggaa
accggcagggatctaaatcctgttgtggctgttaccaaaactgaagaagatgagaaacat
ttgagaaatccagataggcctacttccttgttagaactccagggtaattgggacgaggac
gaaacttattctagaaaacgtgtgcagagattgtcttctccagaaaagtgggaaattaaa
caaatgcttgccgcatcttgtatcgataggagtgaattgccagaattcgataccgaaacg
ggaatcctcccacgagaagacgatgaagaagaagacgttgaaatagagttagtggaagaa
gagccaccatttttacatggccacggaagagctcttggagacttaagtcctgttcgtata
gtaaaaaatcctgatggttctttagcgcaagctgcaatgatgcagagtgctttagcaaag
gaaaggagggaacaaaaaatgttgcaaagagaacaggaaatggattctgttccaacaggt
ctgaacaaaaattggattgaccctctaccagaagctgaaagtagaacattagctgcgaac
atgcgtggaatcggccttcaaacacaagatttgcccgagtggaagaaacacgtgatagga
ggaaaaaagtcttcctttggaaagaaaacaaatttaactcttcttgaacagcgtcagagc
ttaccaatatataaactcagggatgatttagttaaagctgtgacggataatcaaatttta
atcgtaattggagaaacagggtcaggaaagaccacgcaaattacacagtatttagcagaa
gcagggttcacagcccgtggaaagatcggctgtactcaacctagaagagtggctgccatg
tcagttgccaaaagagtggcggaagaattcggttgtcgtttaggacaagaagttggctac
acgattcgttttgaagactgtactggtccagaaaccaacataaagtatatgactgatggt
atgttgctaagagaatgtctcatggatttggatttgaagacatactctgtaattatgttg
gatgaggcacatgaacgtaccattcacacggacgttctttttggattgctgaaacaagct
gtagggaggaggccagatttaaagctaatcgttacaagtgcaactttggatgctgtcaaa
ttttcacaatacttttttgaagcaccgatcttcactattcctggtagaacattcgaagtt
gaagtcatgtacaccaaagaaccagaaacagactatctggatgccgcactgataacagta
atgcagatacatttgagagaacctccaggagacatacttctattcctaactggtcaagaa
gaaatcgacacagcttgtgaaattttatacgaacgtatgaaatctttaggtcctgatgtt
ccagagttaatcattttgcccgtgtattcggcgcttccttcggagatgcagacgagaata
tttgaaccagctccacctggttccagaaaagtggtaatagccaccaatatagcggaaact
agtttgactatcgatggaatttattacgtagttgatccaggatttgtgaaacagaaggtc
tataattctaaaactggaatggatagtcttatagtaacaccaataagtcaagcagctgcg
aaacaaagagcaggaagggctggcagaactggtccaggaaaatgttatagactttatact
gaaagggcttatagggacgaaatgcttccgacgccggttccagaaatccaacgtactaat
ttagcaaccacggtattacaattaaagactatgggcatcaatgatctattacactttgat
tttatggatgctccacctgtcgaatcgctgattatggctttggaatctctacacagctta
agtgcattagataacgaaggtttgttaaccagattaggaagaaggatggcagagtttcct
ctagaacctaatttatctaaaatgcttattatgagcgtacatcttcaatgctcagatgag
atattgaccatcgtcagcatgttatctgttcagaacgtcttctacagaccgaaagataag
caagctttagcagatcaaaagaaagcaaaattcaaccaaccggagggcgatcatttaact
ctgttggcagtttataactcctggagaaataataaatttagtaatgcatggtgttatgaa
aattttgtgcaaattagaactttaaaacgcgctcaagatgttcggaaacaactattaggt
ataatggacagacacaaattggacgtagtatctgcgggtaaaaacactgtaagaattcag
aaagctgtttgttctggtttcttcagaaacgccgcaaagaaagatcctcaagaaggatat
agaaccttggtagatagccaagttgtctacattcatccaagtagcgcgttatttaacaga
caaccggaatgggtaatttatcatgaattggtccaaactacaaaagaatacatgagggaa
gtgacaactatagatccaaaatggttagtagagtttgcgccagcatttttcaaatttagc
gatccgaccaaacttagcaagtttaagaagaaccaaagattggaaccactttataataag
tacgaagaaccgaacgcttggcgaatatcaagggttcgaagaagacgtaattaa
DBGET
integrated database retrieval system
