KEGG   Bombus impatiens (common eastern bumble bee): 100741701
Entry
100741701         CDS       T04362                                 
Name
(RefSeq) replication factor C subunit 5 isoform X1
  KO
K10756  replication factor C subunit 3/5
Organism
bim  Bombus impatiens (common eastern bumble bee)
Pathway
bim03030  DNA replication
bim03410  Base excision repair
bim03420  Nucleotide excision repair
bim03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bim00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    100741701
   03410 Base excision repair
    100741701
   03420 Nucleotide excision repair
    100741701
   03430 Mismatch repair
    100741701
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bim03032]
    100741701
   03036 Chromosome and associated proteins [BR:bim03036]
    100741701
   03400 DNA repair and recombination proteins [BR:bim03400]
    100741701
DNA replication proteins [BR:bim03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    100741701
  DNA Replication Termination Factors
   ELG1-RFC complex
    100741701
Chromosome and associated proteins [BR:bim03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    100741701
DNA repair and recombination proteins [BR:bim03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     100741701
  Check point factors
   HRAD17(Rad24)-RFC complex
    100741701
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_14 RuvB_N AAA_22 RCF1-5-like_lid AAA_assoc_2 AAA_11 AAA_5 ResIII AAA_16 DUF815 AAA_24 DEAD AAA_7 AAA_30 Mg_chelatase PhoH AAA_19 TIP49 ATPase_2 AAA_2
Other DBs
NCBI-GeneID: 100741701
NCBI-ProteinID: XP_012241382
UniProt: A0A6P3UUT8
LinkDB
Position
Unknown
AA seq 329 aa
MTEKPTQTTNLPWVEKYRPKKLDDLISHEEIIKTINKFIDENQLPHLLFYGPPGTGKTST
ILACARKLYTPAQFNSMVLEMNASDDRGIGIVRGQILSFASTGTMYRSGFKLIILDEADA
MTKDAQNALRRIIEKYTDNVRFCIICNYLSQIIPALQSRCTKFRFGPLSTDQILPRLDTI
IKEENLNVSEDGKQALITLSGGDMRKVLNVLQSTSLAFSAVTEENVYSCVGHPLPIDIKN
IINWLLNESYELCYCKIQDIKLKKGLALQDILTELHLFVNKIEFPDSILIDLVIKLAEIE
KRVSIGCSEAVQLNALVSAFQRARDIEIS
NT seq 990 nt   +upstreamnt  +downstreamnt
atgacagagaaacctactcaaaccaccaatttaccatgggtggaaaagtatcgaccgaaa
aaattagatgatttgatatctcacgaggaaatcatcaaaactataaataaattcattgat
gaaaatcagcttcctcatctccttttttatgggcctcctggtacagggaaaacaagtaca
atacttgcttgtgcacgtaaattatatacaccagctcaatttaattcaatggtattagaa
atgaatgcttcagacgatagaggtattggtatagttagaggacagatccttagctttgca
agtacaggcacaatgtacagatctggttttaaattaatcatccttgatgaagctgatgct
atgacaaaggatgcccagaatgctcttaggagaataatagagaagtacacagacaatgta
aggttttgtattatatgtaattatctcagtcaaattatccctgcccttcagtctcggtgc
actaaatttaggtttggcccattgtctacagaccaaattttaccaaggctagataccatt
attaaagaagagaatttaaatgtttcggaggatggaaaacaagcattgataacattgagt
ggaggagatatgaggaaagttttgaatgtcctccaaagtacttcgcttgctttcagtgca
gtaacagaagaaaatgtttattcttgtgtaggacatcctcttccaattgatataaaaaac
atcatcaattggttgttgaatgaatcgtatgaattatgttattgtaaaatacaagacata
aaactaaagaaaggactggcattgcaggatatattaacagaactgcatctgtttgtaaat
aaaattgaatttccagattccatacttatcgatttagtaattaaactagccgaaatagag
aaaagagtatctattggttgtagcgaagcggtacaattaaatgccctcgtttcagcattt
cagagagctcgcgatatcgagatttcttag

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