Bombus impatiens (common eastern bumble bee): 100741822
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Entry
100741822 CDS
T04362
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
bim
Bombus impatiens (common eastern bumble bee)
Pathway
bim03022
Basal transcription factors
bim03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bim00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100741822
09124 Replication and repair
03420 Nucleotide excision repair
100741822
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bim03021
]
100741822
03400 DNA repair and recombination proteins [BR:
bim03400
]
100741822
Enzymes [BR:
bim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
100741822
Transcription machinery [BR:
bim03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
100741822
DNA repair and recombination proteins [BR:
bim03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
100741822
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_34
SWI2_SNF2
TniB
Motif
Other DBs
NCBI-GeneID:
100741822
NCBI-ProteinID:
XP_003489748
UniProt:
A0A6P3DWA0
LinkDB
All DBs
Position
Unknown
AA seq
795 aa
AA seq
DB search
MGPPKRFKKDNDRGKWKKRKEDPEEYNDDDTLDDNETEGIPDAAKNDVEKQDDTALEDEF
GAKDYRSQMILKPDCTLRPLWVAPNGHIFLESFSPVYKHAHDFLIAISEPVCRPEHIHEY
KLTAYSLYAAVSVGLQTHDIIEYLKRLSKTSIPDGIIEFIKLCTLSYGKVKLVLKHNKYF
VESPYPEVLQKLLKDPVIQECRLKKTIEDEKDEIITNVQSKTKAPQFGAKAVTNVPTGNT
KVTETTNDQVPAEVAAVPEDITTFYDKMDKEDEDEEEEHELKTVSFEVNQEKIEVIQKRC
IELEYPLLAEYDFRNDTVNPDINIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGA
GKSLVGVTACCTVRKRALVLCNSGVSVEQWKQQFKMWSTADDSMICRFTSEAKDKPMGCG
ILITTYSMITHTQKRSWEAEQTMRWLQEQEWGIMVLDEVHTIPAKMFRRVLTIVQSHCKL
GLTATLLREDDKIADLNFLIGPKLYEANWLELQKRGFIARVQCAEVWCPMSPEFYREYLG
CKMTKKLLLYVMNPNKFRCCQYLIRYHERRGDKTIVFSDNVFALKHYAIKMNKPYIYGPT
SQSERIQILQNFKFNTKVNTIFVSKVADTSFDLPEANVLIQISSHGGSRRQEAQRLGRIL
RAKKGAIAEEYNAFFYTLVSLDTMEMNYSRKRQRFLVNQGYAYKVITKLAGMEEEPDLMY
TSREEQGHLLQQVLSASDIDADEERIPGEGPRPIVRKAGNMTSMSGADDAVYYEYKKAPS
SSTANKHPLFKKFRT
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgggcccaccaaaacgttttaaaaaggacaatgatagaggtaaatggaaaaagcgtaaa
gaggatccagaagaatacaatgacgatgatactttagatgataatgaaactgaaggtata
cctgatgcagccaaaaatgatgttgaaaagcaagatgatacagcattggaagatgaattt
ggtgcaaaggattatcgttcgcagatgattttaaaacctgattgtactttaaggccactt
tgggtggcgccaaatgggcatatttttttagaatctttttcacctgtatacaaacatgct
catgattttttaattgctatctcagagccagtatgtcgtccagaacacattcatgagtat
aaattaactgcttattctttgtatgctgctgttagtgttgggcttcaaactcatgatata
atagaatatttaaaaagacttagtaaaactagtattcctgatgggattatagaatttata
aaattgtgtacattgtcatatggcaaggtaaagttggtattaaagcacaataaatatttt
gtcgaatctccatatcccgaggtattacaaaaattactgaaggatcctgtaattcaagaa
tgtaggttgaaaaagactatagaagatgaaaaagatgagataatcacaaatgttcaaagc
aaaacaaaagcaccacagtttggagcaaaagcagtgactaatgttccaactggaaacact
aaagtaacagaaacgactaacgatcaggttccagcagaagtagctgctgttcccgaagat
attactaccttctatgataaaatggataaagaggatgaagatgaagaagaagaacacgaa
ttaaagacagttagttttgaagtaaatcaggaaaaaattgaagttatccaaaaaagatgt
atagaattggagtacccgttattggcagaatatgattttcgcaatgatactgtaaatcca
gacataaacattgatttgaaaccgtcggctgtactgaggccctatcaggagaagagttta
agaaagatgttcggaaatgggcgtgctagatcaggcgttattgttttaccttgcggtgcc
ggtaaaagtttagttggagtaacagcttgttgtacagttcggaaacgtgcgttagtctta
tgtaattctggagtatcggtagaacaatggaagcaacaatttaaaatgtggtccaccgcg
gacgattcaatgatttgtcgattcacaagcgaagcaaaggacaaacctatgggttgtgga
attttaatcacaacatattctatgatcactcatacacaaaaacgttcatgggaagcggaa
caaactatgcgatggcttcaagaacaggaatggggaattatggttttagatgaggtacat
acgattcctgcaaaaatgtttagaagagtgttaacaatcgttcagtcccattgtaaattg
ggattgaccgcgacattacttcgagaagatgataaaattgctgatctcaattttttgatt
ggacctaaactgtacgaggccaactggttagaattgcaaaaaagaggctttatcgcaaga
gtacaatgtgccgaagtttggtgtcctatgtcgccggaattttatagagaatatcttggt
tgcaaaatgactaaaaaattgttactttatgtgatgaatcctaacaaatttcgttgctgc
caatatttaatacgatatcatgaaaggcgtggcgataaaaccattgttttctcagataac
gtttttgctttgaaacattatgccattaaaatgaacaaaccgtatatctatggtcccact
agtcaaagcgaacgaatacaaattttgcaaaatttcaaattcaacactaaagtaaatacc
atatttgtgagtaaagtggcagacacttcctttgatttaccagaggctaatgtcttaatt
caaatatcttcgcacggcggttcacgacgtcaagaagcacaacgtttaggacgaatttta
agagctaaaaaaggtgccatcgcggaggaatacaatgcgtttttttacactttggtatca
ctagatacgatggaaatgaattactcgagaaagcgtcagcgttttcttgtaaaccaagga
tatgcttacaaggtcattacaaaacttgcaggaatggaagaagaaccagatttgatgtat
acatctagagaagaacagggtcatttgctacaacaagtcctatctgcgagtgacattgat
gcggacgaggaaagaatacctggagaaggacccagacctattgtacgtaaagccggaaat
atgacttcgatgtcaggcgcggacgatgcagtttattacgaatataaaaaggctcctagt
tcgtctacagcaaataaacatccgctgtttaaaaaatttaggacataa
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integrated database retrieval system
