Bombus impatiens (common eastern bumble bee): 100741985
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Entry
100741985 CDS
T04362
Name
(RefSeq) nucleoporin NUP188 homolog
KO
K14311
nuclear pore complex protein Nup188
Organism
bim
Bombus impatiens (common eastern bumble bee)
Pathway
bim03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bim00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100741985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bim03019
]
100741985
Messenger RNA biogenesis [BR:
bim03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100741985
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBN_AB
Motif
Other DBs
NCBI-GeneID:
100741985
NCBI-ProteinID:
XP_003492064
UniProt:
A0A6P3DUR8
LinkDB
All DBs
Position
Unknown
AA seq
1901 aa
AA seq
DB search
MEVPTVGSLPYCKELWFLISDTVCRCEKQLVEDEIKKETKLLKEGLLFFKPYTEASLQNI
PKNDPSPRMYELISKLAPLLNLDAIITWDLVCNFIKYEYRNCAETFASQLIDFTSMKALI
DDIWEFYYSERMTVIKCLKLMVEYKDKGHRYQKEFAKFFDDVLFGGLLESIRKQIEALKT
VNPPIRSQLCTEEYLHRLYNSSLIEMRELLHILTVIIHDIHIAETEFMKFYESIGGEPRR
LASTKSHEDKKAIARKIKEIQYSQAALFLVTLDVRKHPNMEEWIQSVRKSMQETFEQKCI
RDNSPQDSPLFLSWMLANYAIDPENIDTMNRFRPFGIKAIQLNVFHYLQDLMNSEMICEK
THYAEIVRSSVYNLLTLVCAFVDEDKLNALNDIFNAVAATIQFSETAARFWEERNDGLWL
IYKFAAEQFPYEFEPLTNIAIGLASASELSAERIAMELDNLQSLTLEIPRQRDHNKPLRP
YEQECTIHKNSYTILEGCPRENIRILSSEREVVIFRQKASYWDALHHKIEQLFSQAGGRI
TGTNEMNKNLPEHVSQGLKLLKTLAKRTWIRQSMVIPAELSFEIINRFSYPVLPEEKMYI
YKIVAACIGISSELVLEYPEEILSRMRAGVYPRFNNRYQKTLDFAEAVSFDGGIIASWLS
AIETIAHSYPILNAYLDILSKYLIRKYNEEALYTIEIPGMVFLLQGVLPKLDSWYFDLDA
ERTDLWLKSMFCLHRALESSLPKEDIRNELQLVVAYSLLYLEPRHALLKLIRTGERTLHN
KMMAETDWIRGKGFKAMKSVQLALSVVNRLLIFRKSLGLEIRDRSPLEAALYSSPRVPNG
LLIVPTIVNYLYVWFSPPLQAMAVRLLKKFAEGSSMSLLVCMGMDGTAIRETFASRRGLM
SPTCVADVKVAILELVAVCLEKQPGLTEALFNIVHPAECKRIFPRSVEEFFTEGCRQFLV
KYLNRIYEKDNIVCDKLYNSTMTLLRAMWYHRNEILVNFFRKRENFWTQLFAPLFREIVS
GVKGYSHLLDIITLELFKSTTLEDDFNTNLKKLLDKSTDYWKKLTIYILDDVHADSEESN
RNEKRDSNVTDSLYETNLESWYNFIVTLTDERIAKNYPINVSQAQLITQRSLESLLERIK
QSYNVSSQKITMLLASLTLRCITSWKQMCVDDSRIFKSGLTQLMQEIGQAYRSYGKSLRQ
TLISLLLGCVQCVKSTLREDVTSLEYLLSHSCIIAASELEELKEVATELEKRKQQQYSVE
RKGIDKTVTIDSVIAQKNADERNAETVRGIRESLPATLAVCMVTQLLRSYVERSSTVKHQ
RKSSCVQLRQMIPELMTCIGITLQKYPYLRFSTAALNLLNLIIRSPYTLHPVNENDIAKL
WLSLIPPSDIGNSMLDSLYNDCPNGKWRCQDWWPLYTLGLEFVIGLVTRETPTIYIKSIV
IFFNSHEYQLMVASTLLRHTADLFAADLVQSLVALIHIVATQPYVWNSIQPNVCETLIKC
MYLAYDNTVNLLLRPRILKFIIDGISVESAEELESCDKRSPSGELKLLVNKLIVINTTCA
LSFVHFSPRLNTLVDTIYTQDFWYTPMAEMNFGPPQMSMSSGPRLTYGTIISSTQLFTQA
LHSRSQPVSTLSVSLGGQPDKSDSAKKEWEHAAPEDRRMHSSKDLRRIIHAASGSTSRSS
SNVASEFLVYVSGLDVTVPLLSSPRLVRRPYDPLICENTILSRATALTSGRHVTKGVSAG
NDSPVVAKYQKFSDPWFESMDENNTRFALEVNLVLILCQALEGVRSPRIALRDRQLIARE
TVTELGVFFDFLEHRGTPDDWQVKGSLINPDAKSVRTIQQTVDFNQVVLPARLKETERKE
LVEDILTTGKFTTNISSVQFLPLMRKLLKTVVESLDLTQYP
NT seq
5706 nt
NT seq
+upstream
nt +downstream
nt
atggaagtacctaccgtaggaagtttaccttattgcaaggaattatggtttttaatatcg
gatacggtgtgccggtgtgaaaaacaattagtagaagatgaaattaaaaaggaaactaaa
ctgcttaaagaagggctattattttttaagccatataccgaagcatcgcttcaaaacatt
cccaaaaatgatccatcccctagaatgtacgaattaattagtaaactggctccacttctc
aatttagacgccataattacatgggatttagtatgtaattttataaaatacgagtatcga
aattgcgcggaaactttcgcatcgcaacttatagattttacatcgatgaaagcattgatc
gacgatatttgggaattttattactctgaaagaatgaccgtgataaagtgccttaaactt
atggtcgaatacaaagataaagggcatcgttatcaaaaagaatttgcaaagtttttcgat
gatgtcctatttggagggctattagaatctattcgaaaacagatagaagcgttaaaaaca
gtaaacccaccgatacgatcgcagctgtgtacagaagagtacctacacagattatacaac
agtagccttatagaaatgcgggaattactgcatatattaacggtcatcattcacgatatt
catattgccgagaccgaatttatgaaattttatgaaagcatcggaggagaaccaaggcga
ttagcaagtacaaaaagtcacgaagataaaaaagcaattgccagaaaaattaaagaaata
cagtatagtcaagcagctttatttttagtaacattagatgtcagaaaacatcccaacatg
gaagaatggatacagagcgtaagaaagagtatgcaagaaacttttgaacaaaaatgcatt
cgcgacaattctcctcaggatagtccactattcttatcctggatgttagcaaattatgcc
atcgatcctgaaaatattgatacgatgaatcgatttagaccattcggtattaaagctata
caactgaatgtttttcattatttacaagatttgatgaatagcgaaatgatttgtgaaaaa
acccattatgctgaaattgtacggagcagtgtatataatcttcttactttggtatgtgct
ttcgttgacgaagataaattgaacgcgctaaatgatattttcaatgctgtagctgctaca
attcaatttagtgaaactgcggcccgattttgggaagagcgtaacgatggtttgtggctg
atttataaattcgcagctgaacagtttccgtacgagtttgaaccgttaacgaacattgca
attggattggcgagcgcgtcagaattaagtgccgaaagaatcgcaatggaactggataat
cttcaatcgttaacattggagataccacgacaacgagaccataataaaccgttgagacca
tacgaacaagaatgtacaattcacaaaaactcgtatacgatattagaaggttgtcctcgt
gaaaatatacgtatattgtcaagtgaacgggaagtagtgatatttcgtcaaaaggcaagc
tattgggacgctttacatcacaagatagaacaacttttttctcaagcaggtggcagaatt
acaggaactaatgaaatgaataagaatttgcccgaacacgtctcacagggcttaaaattg
ttaaaaacattagccaaacgtacatggatacgacaaagtatggtcattccagcagaacta
agttttgaaattataaacagattttcttatccagtattacctgaagagaaaatgtacata
tacaaaatagttgcagcttgcatcggtatttcatccgaactcgtgttggagtatccggaa
gaaatattgtcgcgaatgcgagctggtgtttatccaagattcaataatcggtatcaaaaa
acattagattttgcagaagcggtttctttcgatggtggtataattgcgtcgtggttatct
gctatagaaacgattgcacactcgtatccaattctaaacgcatatctagatattttatcg
aaatatttaatccgaaagtataacgaggaagctctatatacaatagaaatacctggtatg
gtatttttattgcaaggtgttttaccgaaattagattcttggtatttcgatttggacgcg
gaaagaaccgacttatggttaaaaagtatgttttgccttcatagagcgctcgaatctagt
ctaccaaaggaggatatacgtaatgaattacaacttgttgtcgcgtatagtttactgtat
ttagaaccacgacacgcattattaaaactgattcgtactggcgaacgtactttgcataat
aaaatgatggcggaaacagattggattcgaggaaagggattcaaagcgatgaaaagcgta
caattagccttgtccgtggtaaatagattactaatatttcgaaaatcattgggtcttgaa
ataagagataggtcaccgttagaggctgccttatattcttcacctcgtgtaccaaacggt
ctcttaatagtgccaacaattgtaaattatctgtatgtctggtttagtccgcctttgcaa
gcgatggctgttagactgttgaaaaaatttgccgaaggatcatctatgtcgcttctagtt
tgtatgggtatggacggtaccgctatacgagagacctttgcctctcgtagagggcttatg
tcgccaacctgtgtcgcggatgttaaagtcgctattcttgaactggttgctgtgtgccta
gaaaagcaacccggcctaacggaagctctatttaatatcgtacatccagcagaatgcaaa
cgaatatttcctcgatcggtggaagaattttttacagaaggatgcagacaatttctagtt
aaatacctaaatcgaatctatgaaaaagataacatcgtgtgtgacaaattgtataacagc
acgatgacgttattacgagcaatgtggtatcataggaacgagattcttgttaactttttt
cgaaagcgggagaacttttggactcagttatttgctccgctttttagagaaatagtatca
ggtgtgaaaggttattctcatctgctggatataattactttagagctattcaaaagtacc
acgttggaagacgattttaacacgaacctgaagaaacttttagataaatcaacggattat
tggaagaaactgacgatatatatactggacgatgtacacgccgatagcgaagagtcaaac
agaaatgagaagcgagatagtaatgttacggattccttgtatgaaactaatttggaatct
tggtataattttatcgtcacgttaaccgacgaaagaatagcaaaaaattatcctattaac
gtatcccaagcgcaattgataacgcaacgttctttagaatcgttattggaacgaatcaaa
caatcttataatgtttctagccaaaaaattacaatgttactggcgtctttaacgcttcga
tgtatcacttcttggaaacagatgtgcgtcgatgattctagaattttcaaatcgggattg
acccagctaatgcaagaaatcggccaagcttatcgcagttatggaaagtctttgcgtcaa
acgctgatttctctacttctcggatgcgtgcaatgtgtgaaaagcactttacgcgaagac
gtgacgagtctcgaatatcttttatcgcattcctgtataatcgctgccagcgagttagag
gagttgaaggaagtcgctactgaattggagaaacgaaaacagcaacagtactcggttgaa
cgaaaaggtattgacaaaacagtcaccatcgatagcgtgatcgcgcaaaagaatgccgat
gaaagaaatgcggaaaccgttcgcgggattcgggaaagtttaccagcaacactggctgtt
tgcatggttacccaattattacgctcctacgtggaacgaagttctaccgtgaagcatcaa
cgaaagtctagctgcgtgcaacttcgacaaatgataccggaattgatgacatgcatcggt
attactttgcaaaagtatccatatttaaggtttagtacggccgctcttaatttgctcaat
ttaatcattcgttcaccgtacactctacatcccgtcaatgagaatgatattgcgaaacta
tggttgagcctaattcctcccagcgacattggaaacagtatgttggactcgttgtacaac
gattgcccgaatggaaagtggcgatgccaggattggtggccgctctatacgctcggtctt
gaatttgtaataggactcgtgactagagaaacacctaccatctacataaaatctatcgtc
atattttttaactctcacgaatatcaattaatggttgcatcgaccttgttaagacataca
gcggatctttttgctgccgatctggtacaatccctcgttgctcttattcatatcgtagca
acacagccgtacgtttggaattcgatacagccaaacgtttgcgagactctgatcaaatgt
atgtatttggcatacgataataccgtaaacttgttactgcgaccgcgaattctcaagttc
atcatcgacggtatcagcgtagaaagtgccgaggaattggagtcttgtgacaaaagatca
ccaagtggtgaattaaaattactagttaacaaattgatcgtcataaacacaacttgtgcg
ttaagcttcgttcacttttcaccaagactaaacactctcgtagacactatatatacgcaa
gacttttggtatactcccatggcggaaatgaacttcggaccaccccagatgagcatgagc
tccggcccgcgattaacttacggcacgataatcagctcgacacagttatttacgcaagct
ttgcattctcgatctcaacctgtgagtactttgtccgtttctctcggtggccaaccagat
aaatcagattccgctaagaaggaatgggaacatgccgcgccagaggatcgacgaatgcat
tcgagcaaagatttaaggaggattatccatgcggcatccggttccacttcgagatcatct
tccaacgtagcgagtgaatttttggtgtacgttagtggcctagatgtaactgtgccactg
ttaagtagcccaagacttgtgcggagaccgtacgatccacttatttgtgaaaatactatt
ctgtcaagagcaacggccttgacaagcggtagacacgtaacgaaaggagtgtctgccgga
aatgacagccctgtcgtagcgaaatatcaaaaatttagcgacccttggttcgaatctatg
gacgaaaataatacgagattcgctcttgaagtcaatctcgtgttaatcttgtgtcaagcc
ctagaaggggtcaggagtccaagaatcgcacttcgagatcgtcagctaatagcgcgcgaa
acggtgaccgaattaggagttttcttcgattttctggaacatcgaggtactcccgacgat
tggcaggttaaaggatcgttaattaatcccgacgccaaaagcgtaagaactattcaacaa
actgttgacttcaatcaagttgtcttacccgccagattaaaagagacagaaagaaaggaa
cttgtagaagacatattaactacgggaaaattcacaaccaatatcagtagtgtacagttt
ttacctttgatgaggaaattattgaaaacagtggtggaatcgctagatttaacacagtat
ccataa
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