Bombus impatiens (common eastern bumble bee): 100742059
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Entry
100742059 CDS
T04362
Name
(RefSeq) ATP-dependent RNA helicase dbp2 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
bim
Bombus impatiens (common eastern bumble bee)
Pathway
bim03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bim00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100742059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bim03041
]
100742059
03009 Ribosome biogenesis [BR:
bim03009
]
100742059
Enzymes [BR:
bim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100742059
Spliceosome [BR:
bim03041
]
Complex A
U1 snRNP components
U1 related factors
100742059
Complex B
100742059
Ribosome biogenesis [BR:
bim03009
]
Eukaryotic type
Pre-60S particles
Helicases
100742059
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
100742059
NCBI-ProteinID:
XP_003489670
UniProt:
A0A6P3DW51
LinkDB
All DBs
Position
Unknown
AA seq
605 aa
AA seq
DB search
MFNRDRDHNRARRGGSGRGNNKGGSDSIRGNSINICGIRGRGTTNNIRGIVKNKQPGGAL
RKINWDVRSLEPLRKDFYIEHPTVRSRSKEEVCQFRENAEITIKGDNIPNPIQYFEEGNF
PPYVLDEIHKQGYSQPTAIQAQGWPIALSGRDLVAIAQTGSGKTLGYVLPAIVHIIHQPR
LGNGDGPIALILAPTRELAQQIQEVANCFGEAAGVRNTCIFGGAPKGPQAHDLERGVEIC
IATPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT
WPKEVRALAEDFLTDYTHLNIGSLTLSANHNIIQIVDVCQEFEKDLKLYRLLQEIGNEKE
NKTIIFVETKRKVDDITRNIRRDGWQALSIHGDKNQQERDHVLQEFKSGRAPILVATDVA
ARGLDVDDVKYVINFDYPSSSEDYIHRIGRTGRRRQTGTAYAFFTTHNMKHAGDLIEVLR
EAGQNINPRLTEMAELAKSGSYGSRSGKRFMSNDRSNARRGNTDTRGRGGSTRGRGRGGN
SYQSTSNNYSNSDYNSYNNMRQSNSTNQNTGYGYTQRTYGQSNLTPSYGGGDNYGSTYQY
RGTTY
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatcgagacagagatcacaatagagcccgcagaggtggtagtggcagaggtaac
aataaaggaggtagtgatagtattcgtggtaatagcattaatatatgcggtatacgtggt
agaggcactactaataatatcagaggtattgtaaaaaacaaacaacctggaggagctctt
agaaaaatcaattgggatgtgagatctttagaacctttgcgcaaagatttttatattgaa
catcctacagtaagaagcagatcaaaagaagaagtatgccagttcagagaaaatgcagaa
ataactataaaaggtgacaatatacctaatcctattcaatattttgaggaaggaaacttc
ccaccgtatgtattggatgaaatacataaacagggatactctcaacctacagcaattcaa
gcacaaggatggcctattgcacttagtggcagagatttagttgctattgcacaaactggc
tctggaaaaacgctaggatatgttttaccagcaattgtacacatcatacatcaaccacgt
cttggtaatggagatggtccaattgctttaatcttagctcctacaagagaattagcccaa
cagattcaggaagtagctaattgttttggagaagcagcaggtgtaagaaatacctgtatc
tttggtggtgcacccaaaggcccacaggcacatgatttagaaagaggtgttgaaatatgt
attgctacaccaggtagacttattgatttcctggaaagagggactacaaatttacgcaga
tgcacatatttagtattagatgaagctgatagaatgttggatatgggttttgaacctcaa
ataagaaagataattgaacaaattcgacctgatagacaggttttgatgtggtcagctaca
tggcctaaagaagttcgtgcattagctgaagactttctgactgactatacacatcttaat
attggttctctgactttatcagctaatcataatattattcaaattgtggatgtttgccag
gagtttgaaaaagatttaaaattatatagactacttcaagaaattggaaatgaaaaagaa
aataaaacaataatttttgttgaaacaaaacgaaaagtggatgatattacaagaaatatc
aggcgagatggatggcaagcattgagtattcatggtgataaaaatcagcaagaaagagat
catgtattacaggaatttaaaagtggaagagctcctattttagttgcaacagacgtagct
gctagaggcttagatgtggatgatgttaaatatgtaataaactttgattatccgtcatcg
tcagaagattacatacatagaattggtcgtactggacgaagaagacaaactggtaccgct
tatgcattctttacaactcataacatgaaacatgcaggagatttaatagaggtattaaga
gaagcaggacaaaatataaatccacgacttactgaaatggcagaattagctaaatcagga
agttatggaagcagaagtggcaaacgatttatgagcaatgacagaagtaatgctagacga
ggtaatactgataccagaggaagaggtggttctacgagaggaagaggtcgtggtggaaat
tcttatcaatctacttcaaacaattattcaaattcagattacaatagctataacaatatg
agacaaagtaattcaactaatcagaatacagggtatgggtatacacagagaacttatggg
cagagcaatttaacaccaagttatgggggaggagataattatggaagtacttatcagtat
agaggaacaacatactaa
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