Bombus impatiens (common eastern bumble bee): 100742320
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Entry
100742320 CDS
T04362
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
bim
Bombus impatiens (common eastern bumble bee)
Pathway
bim04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
bim00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100742320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bim04131
]
100742320
Membrane trafficking [BR:
bim04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
100742320
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
WD40_CDC20-Fz
ANAPC4_WD40
zf_RING_Vps8
WDR55
TPR_Vps41
zf-RING_Vps41
zf_RING_Vps8_fungal
Beta-prop_EML_2
TPR_VPS8_2
PQQ_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_IP5PC_F
WD40_WDHD1_1st
zf-RING_5
zf-RING_11
zf-RING_UBOX
zf-C3HC4
WD40
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
100742320
NCBI-ProteinID:
XP_012246338
UniProt:
A0A6P3V280
LinkDB
All DBs
Position
Unknown
AA seq
1300 aa
AA seq
DB search
MAENGLGSDAGSQEYLATEVINLDIEELDNTEYAIPAVEELPSLESILTEPDCTSLSGTD
DDFGLTSGEKLGSSETTSVGSHLSLNSLNKSNKASQPTSSGAILRHVILKGISSQIISAS
EKVNAGLASAVAAGGNMLVVGTSHGLVLGFDSSQTLRWCDQEARHQGSVSALCFNHDGSR
ILAGFARGHILMIDSSNGKVLRTLTDVHPLDTAVLHVKFTDSPKVALCSDSGGSVFELNF
TRVMGVRGCDSRCLFSGSRGEVCTLEPLLLNHLPSHALKNYTLVAMATLSKVIVVCIRPR
MRVVLTHPLSGAPIAPPQLSWQLVVIQAADASRVIDPVLALARDDVVHFYQVCTEAGSRV
KLSPLRRMTLPYTISNLRWLNPRSLAVLDTQERLHLLDVRAQDNLETLDMSRVGISYASS
HFKGLSTGGNVSKAMALAGERACYNTVVTFGTQLLLLGTKSLHVVCIRTWTERLRHLTMQ
RRYPEALALGLSFYQDKGKAVVGLRGSKQRRKQIARDKVCQVLIQYMEELNHCLADENAE
FEIVTTCVDYCIQLENTDLLFGKLWDLVSESEGLKASYLHALENPLLDGSLRPRLPPLIA
QQLVTLYDQEEKVDSLQAIIVLLDVDCLDIHQVTTLCRQRGLWEALIHLQTTALGDFTAS
IHQLVPILQNMLTNSKDSLTRDSIQLGNALLVYASCCLAGRGFPRDELPEGMSQRAKTDV
LRALLSQHSSLANDTERQYPYLRTLLQFDAKGFLDVIAIAFQEPEFTSEMGLRQRQRLID
ILLNIVMPSTPLSPRNPDYITDEQRNLVLIFIANEVAENTVNLEPSMLNKMIEILCTDSS
MGSSNELKTDKESAILGLLRSKKLRNISDNTLLNLAERANFMRVAELLYSARENWIAVCK
CMILHPSRHHDIWLWLKHLSPNSLQLVIMANAVALVGINANQFAMLIATHLQNNVSEILQ
ILENTPTLQYTLLEALYQIVQYKEEDITLELTTEMLEKYLELMCKLQPDHVVEHIQGFHG
CRLNEALQIVQKANHKDAEAVMLEKLGNYQDAFDILLKEFQNNLELYCQNKVSENASIHS
AIQLAGICRRSAGNLDWMPLVETILQTHSNSTNKEVEKLSGKLLRIALEFLSGTTALSTV
LEQILKHPLATSGTIGDIRKLLSGVLTHSRYEQTLVETTARLVSLELHKALKKSLRDAGR
ACASVSVICSICRHLLSQCTEYIIVFSCGHGFHSECLGEPKSCYKCLKSKGWAPIVTNIT
HTTKSFHEHKQILPPEFMRNKDLSLRLAPPTSLPDLEGIF
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaatgggttggggtcggatgctgggtctcaagaatacctcgcaacagaggtt
attaatttagatatcgaagagttggataacacagagtatgctataccagctgtggaagaa
ttaccctccttagaaagtatattgacagaacctgattgtacatcattatctggaacagat
gatgactttggtttaacatcaggtgaaaagctagggagtagtgaaacaacaagtgttggg
agccatttatccttaaactctttaaataaatcaaacaaagcttcacaaccaacgtcctct
ggtgctattttgagacatgttatattaaaagggatatcgtcacaaattatatcagctagt
gagaaggttaatgctgggttagcaagtgcagttgctgctggagggaatatgttagtagtt
ggaactagtcatggtctggtattaggttttgattcttcacagacattaagatggtgtgat
caggaagcaaggcaccaaggatctgtatctgcattatgtttcaatcatgatggaagcagg
atattagctggatttgctagaggacatatattaatgatagatagttctaatggaaaagta
ttaaggacacttactgatgtacatcctcttgatacagctgtgttacatgttaaattcaca
gattcaccaaaggtagcattatgtagtgatagtggtggatccgtttttgaattaaatttt
acaagggttatgggtgtaagaggctgtgatagcaggtgtttatttagtggatctagaggt
gaagtgtgtacattagaaccattgttattgaatcatctgccatcacatgccctgaaaaat
tataccttagtggcaatggcaacattatcaaaggtaatagtagtttgcataagaccacga
atgcgtgttgtgttaactcatcctttatctggtgcacctatagcaccaccacaactatct
tggcagcttgttgttatacaagcagcagatgcttctcgtgtaattgatcctgttctggct
cttgcaagagatgatgtggttcatttttatcaagtatgtactgaagctggttcaagagta
aaattatctcccttaagaagaatgactcttccatatacaataagtaacttacgatggtta
aatccgagatcattagcagtattggatacacaagaaagattacatttattagatgtaaga
gcacaggataacttggaaactttagatatgagtcgcgttggtatttcatatgcatctagc
catttcaaaggtctgtccactggtggaaatgtttcaaaggcaatggcattggctggtgaa
agagcatgttataatactgttgtaacatttggtactcaacttttactattgggtaccaaa
agtttacatgtagtctgtatacggacatggactgaacgattgcgacatttaacgatgcag
agaagatatccagaagcattagctttaggactttctttttatcaagataaagggaaagca
gttgttggtctacgtggttcgaaacaacgtcgtaaacaaatagctcgcgataaagtatgt
caagttttgattcaatatatggaagaattgaatcactgtcttgcagacgaaaatgcagaa
tttgaaatagtcacaacttgtgtagattattgtatacaactagaaaatacagatttatta
tttggaaaattatgggacttagtttcggagtccgaaggattaaaagcgagttatttacat
gccctcgaaaatcctttattggatgggagcttacgaccgcgactaccaccgttaatagct
caacagctagttaccctttacgatcaagaagaaaaagtagattcgcttcaagcaattata
gtgttattagatgttgattgtttagatatccatcaagtaacaacactttgtcggcaacga
ggtctctgggaagctttaatacaccttcaaacgacggcattaggtgactttactgcttca
attcatcaattagtaccaatattacaaaatatgttaacgaattcaaaggattcgttaact
cgagatagtatacaacttggcaatgcacttttggtctatgctagttgctgtcttgccggt
cgtggttttcccagagatgaacttcccgagggtatgtcccaaagagcaaaaacagatgta
ttaagagcattgctttcacagcattcgagtttggctaatgatacagaaagacaatatccg
tatctaagaactttgctacagtttgacgcaaaagggttcctcgacgtgatagcaattgcc
ttccaagagccggaatttacgtctgagatgggtctcagacaacggcaaagactcatagat
atattattaaatatcgttatgcctagcacacctttaagtccaaggaatcctgattatatt
actgacgaacagagaaatttagttcttatatttatagctaatgaagttgcagaaaatact
gttaatttagaacctagtatgttaaataaaatgatagaaatattatgtactgactcaagt
atgggatcatcaaacgagcttaagactgataaagaaagtgcaatactgggattattgcgt
tcaaaaaaattgcgtaatatatcggataatactttacttaatttagcagaaagagccaat
tttatgcgtgttgcggagttgctgtatagcgccagagaaaattggattgcagtttgtaaa
tgtatgatactgcatccatctagacatcatgatatttggctctggttaaaacatctttct
ccaaattcgttgcaattagtcataatggcaaatgccgtagctctggtgggaattaatgca
aatcaatttgctatgttgatagcaacacatttgcaaaacaacgtttctgaaattttacaa
atactagaaaatactccaaccttacaatatactttactagaagctttatatcaaatagta
caatacaaagaagaagatatcacattagagcttacgactgaaatgttagaaaaatatttg
gaattaatgtgtaaattacaaccagaccatgttgttgagcatattcaaggatttcatggt
tgtagactaaatgaagcattgcaaatagttcagaaagcgaatcacaaagatgctgaagca
gtaatgttagaaaaattgggaaattatcaggatgcgtttgatattcttttgaaagaattt
caaaataatttagaattgtattgtcagaacaaagtatcagaaaatgcatcaattcacagt
gcaatacaactagcaggaatatgcagacgatctgcaggaaatttagattggatgccactt
gtggaaactatacttcaaacacattcaaatagtactaacaaagaagttgaaaaattaagc
ggaaaattattaagaattgcactagaatttcttagtggaacaacagcattatcaactgta
ttagagcaaatattgaaacatccattggcgacaagtggaacaataggtgacataagaaaa
ttattatctggagtacttacacattcccgatatgaacaaactttagttgaaactactgca
cgtttggtcagtttggagcttcacaaggcactgaaaaagtcgcttagggatgcaggaaga
gcttgtgcaagcgtatcagtaatctgctcaatatgtagacatttgttatcacaatgtacg
gaatacataatagttttcagttgtgggcatggttttcattcagaatgtttaggagaacct
aaatcttgttataaatgtttaaagtctaagggatgggcacctattgttactaatatcaca
catactactaaatcattccatgaacataaacaaattctaccaccagaatttatgcgtaat
aaagatctttctctaagacttgcaccacctacttccttaccggatcttgagggtattttt
taa
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