KEGG   Bombus impatiens (common eastern bumble bee): 100742387
Entry
100742387         CDS       T04362                                 
Name
(RefSeq) THO complex subunit 6 homolog
  KO
K13175  THO complex subunit 6
Organism
bim  Bombus impatiens (common eastern bumble bee)
Pathway
bim03013  Nucleocytoplasmic transport
bim03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bim00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100742387
  09122 Translation
   03013 Nucleocytoplasmic transport
    100742387
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bim03019]
    100742387
   03041 Spliceosome [BR:bim03041]
    100742387
Messenger RNA biogenesis [BR:bim03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     100742387
Spliceosome [BR:bim03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    100742387
SSDB
Motif
Pfam: Beta-prop_IFT122_1st WD40 WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_NOL10_N Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_WDR41 NBCH_WD40 Beta-prop_WDR36-Utp21_2nd WD40_Gbeta DSE1_N Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_ACSF4 CFAP251_N Beta-prop_CAF1B_HIR1 EIF3I Nucleoporin_N Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_Vps41 WDR54 Beta-prop_IFT140_1st Beta-prop_EIPR1 WDR90_beta-prop_4th UCP007778 WD40_like Beta-prop_IFT140_2nd
Other DBs
NCBI-GeneID: 100742387
NCBI-ProteinID: XP_003489507
UniProt: A0A6P3DRE7
LinkDB
Position
Unknown
AA seq 332 aa
MMSGTINQKLFYNTVLSQAFSPDGNYLLAGNIYGDISVFELLKALGPHKVEENELQGPNY
HFTAHPDQQVESMISTDNFLVTGTSGEICGWDWKIVTSSKAPKSKVSWTIQLPVNKDSYE
KPDVNYLVYSKSNNILYAGCGDNNIYVITLEDGRILRSLEGHTDYIHCLSLMGNQLASCG
EDGTVRLWDLRKRENTNILTPHLVDKVARPRFGKWIGAIDFTEDWLLCGGGPSLSLWHMR
TMEAATVFELPDEGIHVANIYEERVIAAGTAPHVYHLTYQGEMLAKVPTSSNTVYSIVYQ
ENPQKVFSIAGSSNNIDICTNFNYRELMLKFA
NT seq 999 nt   +upstreamnt  +downstreamnt
atgatgtcgggtacaattaatcaaaaattattttataacactgtattgtcacaagctttc
tccccggatggaaattatttattggctggaaatatttacggagatatttcagttttcgag
ttattgaaagctctaggaccgcataaagtcgaagaaaatgaattacaaggccccaattat
catttcactgcacatcccgatcaacaagtggaaagtatgatttcaacagacaatttctta
gtaacaggaacatcaggagaaatatgtggatgggattggaaaatagttacttcgagtaaa
gctccaaaaagcaaagtatcatggaccatacaacttccagttaataaggacagttacgaa
aaaccagatgtaaattatttagtatattcaaaatcaaataacattctgtatgctggttgt
ggtgacaataatatttatgtaattactctagaagatggtagaatattaagaagcttagaa
ggacatacagactatattcattgtctatccttaatgggtaatcaattagcttcatgcggt
gaagatggaacagtaaggttgtgggatttacgaaaaagagaaaataccaatatattaact
cctcatttagtagacaaagttgccagaccaagatttggaaaatggattggcgccatagac
ttcacggaagactggctgttatgtggtggtggtccaagtttatctttatggcatatgcgt
acgatggaagcagctactgtgttcgagcttccggatgaaggcatccatgtggcaaacatc
tacgaagagcgtgtaatagctgctgggacggcacctcacgtttaccatctaacttatcaa
ggagaaatgttagctaaagtgccaacttccagcaataccgtatatagtattgtatatcag
gaaaatccacaaaaagtgttcagcatagccggttcctcgaacaacatagacatctgtacg
aactttaattaccgcgagttaatgttaaagtttgcttaa

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