Bombus impatiens (common eastern bumble bee): 100743081
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Entry
100743081 CDS
T04362
Name
(RefSeq) protein RRP5 homolog
KO
K14792
rRNA biogenesis protein RRP5
Organism
bim
Bombus impatiens (common eastern bumble bee)
Brite
KEGG Orthology (KO) [BR:
bim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bim03009
]
100743081
Ribosome biogenesis [BR:
bim03009
]
Eukaryotic type
90S particles
Other 90S particles
100743081
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
S1
S1_RRP5
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
Suf
OB_PDCD11
TPR_14
OB_RRP5_4th
TPR_19
PRP6_TPR
OB_cyt-4
TPR_2
TPR_6
ARM_TT21_N
Cwf_Cwc_15
Motif
Other DBs
NCBI-GeneID:
100743081
NCBI-ProteinID:
XP_012247662
UniProt:
A0A6P3V476
LinkDB
All DBs
Position
Unknown
AA seq
1391 aa
AA seq
DB search
MKLKSFPRGGKEVQKRKPSDLLFDKYEKIGKRNCEKQRAKKQDKGEPNFIPNTAERLSYA
TISEGLVVLGCIYEVTNYDLLISLPGGLVGRAQITDISECYTNLLQSLVKSQDSLTNELK
SLSELYTYGDYVVCYVKAIQPQETWQISISLEPSLINQSLDVTYLDSGSKIVCTISSIED
HGYVVDTGLINVRAFISTKESGNKKCLFPGKQLLCYVKEVKTNENTSTIILTLKEKLVKA
ICETEIKSLDSLMPGTKFNLSIKKVLSNGLCVSLDENNIGFINQTYLDEPLSKYSNNLKI
TGTLLYILPTIKFAYFSSTIDKNRDYTIKPGDVVKEATVLFRESGGIVLQLAKSGIRGFV
SFKRTSVEYDTIIEKFAPGTTHKCRILSYSWLDGIYICTMQRSLLEQKYFSLSDFKPGDV
VNVKITNIDKVNGFINVQHGKFNGQIAPDHISDEGLSALKKLKVDEEVEARVLSVHIDRK
RIYLTLKRSLITSDLPILANIQDAKIDAKHHATIIQIHKRGILVKFFGDVKGWIPHTALD
MLTSNVNWNYSIGQTISVKIQTVNTDSGEITLNVANQDIQVEEATFDIGEEVEGTIIESS
TQGLYLRICRNEGQTVSTGFLPAGHMSPCMEIAALLASKYVPGDTLSALVFATVPNLILT
RTFVTQGRYRNFEKLKIGDCIPCTIKDMEPDGIRLILPVAECTPFGYVSYSNVSNFNLLH
TNQILMAKIFSINKKEQQLGLTLSLKKIYDDLSDPKSRMVAALDTLILYFNKLVELSRNS
YYKNRPIASVKLGQRVTGTIEKITADGLVVQLQNNLLGIVSKDHYSENKKIGDKISGTII
WKNYVHELVELTTLSSIMHKISAKQNKQIQFPDGKLLRGRILMVTNWFILIFLQGIGKGT
LAAIPVRRHINDLQPDLTPYTIHSKIKCYALLNSKESDIMPLCIIKSAFEKKYCVREKSG
DNNNLKRKKQNQENVVLTKKIKIEKLQEVPKLENKGKRNREKPENDLEKEYSKTICDEQI
GEEKIKLEDTKPSKKNLRDTLKNVNNDKDNEQRPRTSACGFFWDGNPDLTLLQDKESSSD
SEDEIEEKPKLKNKKLSAAERREQERQKEREIRQREEALADNLLPNSVDQFDRLVLASPD
SSIIWLQYMAYHLQTTEIEKARAVARRAVKTINFREENEKLNVWNAWLNLESKYGIPESL
NDVFQEAVRSNDSLKIYNHMLTVHVEAGRQIELEKTINTMIGKFKHIPEVWFNCGEALVK
MGLKDKSRHIMQRALQSLPASEHVNLMVRFAIMENKFGDKERAQTLFEQILSSYPKRVDI
WSCYVDSLVKSNDIDIARKVLERAVLQVLPPRKMKILYKKFINLEEQHGTQEDVIRVQQM
AVEYVEKQCTR
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgaaaagttttccaagaggtggaaaagaagtacaaaaaagaaaaccatcggat
ttgttatttgacaaatatgagaaaattggtaaaaggaattgtgagaaacagagagcaaag
aaacaagacaaaggagaaccaaattttattcccaatactgcagaacgattatcatatgca
acaatatctgaaggattagtggtattaggatgtatttatgaagtgacaaactatgatttg
ctgatatctttgccaggcggcttagtaggtcgtgctcaaattacagatatcagtgaatgt
tacacaaatttgttgcaaagtttggtcaaatcacaagattctctgacaaacgaattgaag
tccctttctgagttatatacctatggagattatgtcgtatgttatgtaaaagctatacaa
ccgcaagagacgtggcaaatttcgatatctcttgagcccagtctgataaatcaaagttta
gatgttacttatttagatagtggctcaaaaatagtatgtactattagtagtatagaagat
catggttatgtggtagatacaggtttaataaacgtaagagcgtttatttctactaaggaa
agtggcaataaaaaatgtttgtttccaggtaaacagcttctatgctatgttaaagaagtt
aaaactaatgagaatacatcaacgattatattaactttgaaagagaagcttgttaaagct
atttgtgaaacagaaattaaatcattggacagcttgatgccaggcacaaaatttaatctt
tctataaagaaagttttgtctaatggcttatgtgtttcattagatgaaaacaatatagga
ttcataaatcaaacatatttagatgagcccttatctaaatactcaaataatctgaaaatt
actgggacattattatatattttgccgaccatcaaatttgcatacttcagctcgacgata
gataaaaatagagactatactattaagcctggagatgttgtaaaagaagctactgttcta
ttcagagaatctggtggaatagtactacaattagctaagagtggaatacggggattcgtt
tcctttaaaagaacaagtgttgaatatgatacaatcattgaaaaatttgcacctggtacc
acacataaatgcagaatattatcatacagctggttagatggaatttatatctgtaccatg
caacgttcactgttggaacagaagtatttttcattgtctgattttaaacctggcgatgtg
gtaaatgtaaagatcacaaatattgataaagtgaatggtttcattaatgtacaacatggt
aaatttaatgggcaaattgcaccagatcatatatctgacgagggcttaagtgccttaaaa
aagttgaaagtcgacgaagaagtagaagcaagagtcttgtccgttcatatagaccgaaaa
agaatatatctcactttgaaaagatctttaataacaagtgacttgcctattttagcaaac
atacaagacgcgaaaattgacgcaaaacaccacgcaactatcattcaaatacataagcgt
ggaatattggtaaagtttttcggggatgttaaaggttggattccacatactgctctcgac
atgctaacatctaatgtaaattggaactattcgattggacaaacaatttcggtaaaaatt
caaacagtgaacacagattcgggagaaataactctaaatgtggctaatcaggacatacaa
gttgaagaagcaacattcgatattggtgaagaagtagaaggcacaataatagaatcatcc
actcagggattatatttaagaatatgtagaaatgaaggacaaactgttagtacaggattt
ttaccagctggtcacatgtcaccttgtatggagatagcagctctactagcatcaaaatat
gttcctggtgatacactttcagctcttgtatttgctacagtacctaatctaattttaact
aggacttttgtaactcaaggaagatacaggaattttgaaaaactgaaaataggagactgt
ataccttgtacgatcaaagatatggagccagatggtataagactaattttgccagttgca
gaatgtacgccatttggatatgtgtcctatagtaacgttagtaattttaatttactgcac
acaaaccaaattttaatggcaaaaatattttctattaacaagaaagaacaacaattagga
ctaacattgtcgctaaagaaaatatacgatgatctatctgatcctaaaagtagaatggtg
gcagcattggatacattaatcctgtattttaataaattagtagaactttcaaggaattca
tactacaaaaacagaccaattgcatctgtaaaattagggcaaagagttactggaacgatt
gaaaaaattacagctgatggtttggttgttcaattgcaaaataacttgctcggtatagtg
tctaaggatcattactctgagaataaaaaaataggggacaaaatttctggaacgattata
tggaaaaattacgtacacgagcttgtcgaattgaccacgttatcgtcaataatgcataaa
ataagtgccaaacaaaataagcaaatacaattccctgatggcaaattgctacgtggtaga
atcttaatggtgacaaattggtttatcttgatattccttcaaggtattggtaaaggaact
ttagctgcgatacctgtacgtcgtcacataaatgatttacagccagatctaacaccttat
accattcattctaaaattaaatgttacgccttattaaattccaaagaatccgatattatg
cctctctgcatcataaaatctgcatttgaaaagaagtattgtgtgagagagaaatcaggt
gataataataacttaaaaagaaagaaacaaaatcaagagaatgtggtactcaccaaaaaa
ataaaaattgaaaaattacaggaagtaccaaaattggaaaacaaagggaaacgaaacaga
gaaaaaccagagaatgatttagaaaaggaatattcaaagacaatctgtgatgaacaaata
ggagaagaaaagattaaattggaagataccaaaccttctaaaaaaaatttgagagacaca
cttaaaaatgttaataatgataaggataacgagcagaggccaaggacatctgcgtgtgga
tttttctgggatggcaaccctgatttaactctccttcaggataaagagtcatctagtgat
agtgaagatgaaatagaggaaaaaccaaagctgaaaaataagaaattaagcgccgctgaa
cgtcgagaacaagaaagacagaaggaacgtgaaattcgtcaaagagaggaagcgctcgcc
gataacctgttaccaaattctgtagatcagttcgatagattagttttagctagtccagac
agttcaataatatggttacagtatatggcataccatttacagacgacagaaatcgagaaa
gcaagagcagttgcgagacgagcagtgaaaacgattaatttcagggaagagaatgaaaaa
ttaaacgtttggaatgcttggttgaatttagagtctaaatacggaattcctgaatcattg
aatgatgtttttcaagaggcagtaaggtctaacgattcactaaaaatatacaatcacatg
ttgactgttcatgtcgaggctggcaggcagatcgaactagagaaaacaattaataccatg
atcggaaagtttaaacatattcccgaagtatggtttaattgtggagaagctttggtaaaa
atgggtttgaaggacaaatcaaggcatattatgcagagagcattgcaatctttgccagca
tctgaacatgtaaatctaatggtaaggtttgcgattatggagaacaaatttggggataaa
gagagagcacaaactctgtttgagcaaattctaagttcctatccgaaacgggtggatata
tggtcctgttatgttgattctttggttaaatctaatgatattgatatagcaaggaaagtt
ctagagagagcagttcttcaggtattaccacctagaaagatgaaaatcctgtataaaaag
tttatcaatttggaagaacagcatggtactcaggaagacgtgattcgtgttcaacaaatg
gctgtagaatatgtagagaagcagtgtacaagatga
DBGET
integrated database retrieval system
