KEGG   Bombus impatiens (common eastern bumble bee): 100743478
Entry
100743478         CDS       T04362                                 
Name
(RefSeq) vam6/Vps39-like protein
  KO
K20183  Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
bim  Bombus impatiens (common eastern bumble bee)
Pathway
bim04140  Autophagy - animal
bim04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:bim00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    100743478
   04148 Efferocytosis
    100743478
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:bim04131]
    100743478
Membrane trafficking [BR:bim04131]
 Endosome - Lysosome transport
  Tethering complex
   Hops complex
    100743478
SSDB
Motif
Pfam: Vps39_1 CNH zf-Vps39_C TPR_Vps41 Clathrin Beta-prop_RIG_2nd Beta-prop_NUP159_NUP214 WD40_like Zn-C2H2_12 AP_endonuc_2 B129_C2H2-zf
Other DBs
NCBI-GeneID: 100743478
NCBI-ProteinID: XP_003492330
UniProt: A0A6P3DV37
LinkDB
Position
Unknown
AA seq 882 aa
MHDAYEETLILNISVQIESMAAYDDNLLIGTREGHLLMYNVPSVLDDNHKLELLRHSKNF
NKKRITQIDVVPEYNLLIILTDNIVCVHDLNSPNFQQLYQLQKTRGATLFALDIKPNQIV
NGENQTVVHLCVAVKRKLQLYNSRGKKFETFNGFELTVPDIPRELCWCGETLILGFRGLS
YTTLNLNGKTKELFPTGKSPEPSVTKLSDNSFVLGKDSQSFVMDTRGELIQHNPVKWSDT
PSALAWDDPYLLGIVHDRLEVYTIEGCLHIQTIKDLNKARLIYRCKQGKVFVASISHVWC
VRAVDVTHQIRTLLEQTQFQLAIKLTSLSDITEEEKHKQIYKIQTLYAHHLFRNKRFQEA
MDQFLKIGTDPYEVIMLFPDLVTPSSSNPEVSDPTLPKLQDHDLEKGLRALIIFLTEVRY
KLMGGNAKSKDKDNNEEKSVVNGKKNMTAVATEQLLKIIDTTLLKCYLQTTDALVAPLLR
LNHCHLAEAEKTLLMHQKYPELIILYQTKGQHRKALELLEKHAKENDSSLKGTARTIQYL
QQLGKDHMDLILKFAGWVLNEDPEQGLRIFMEDMQQVELLPRPKVLDYLLCHHKDLVITY
LEYVVHVWEDTNPLFHNVLIHQYKEKCLACMSENATPAEKQTAQHIRQKLQQFLEKSTHY
TPETILVHFPFDNLFEERAIILGRLGRHQQAISIYISLLNDIAKATEYCYNVYTRYQNQE
IVDKQKQSDGADEVYVMLIQQLLKPDDKGVLITGCIPEMQRTAEPDLEMALELLEKHASK
INPLKALELLPDTVPIGRIKYFLEVSLQEKLNTARRIQVLKGLLYAELLQVQEQRMHYES
QSVLMTEFNICPVCKKRFGNQSAFARYPNGDIVHYSCQDRKA
NT seq 2649 nt   +upstreamnt  +downstreamnt
atgcacgacgcttatgaagaaaccttaatattaaatatttctgttcaaatagaatctatg
gctgcgtacgatgacaatttactgattggaacaagagagggtcatcttcttatgtataat
gtaccatctgtattagatgacaatcacaaattagaattgttacgtcatagtaaaaacttc
aataaaaagcgtatcactcagatagatgttgtaccagagtataacttgcttataatttta
acagataatatagtatgtgttcatgatttaaactctccaaactttcaacaactttatcaa
ttacaaaagactcgtggtgccacattatttgctttagatataaaaccaaatcaaattgta
aatggtgaaaatcaaacagttgtgcacttatgtgttgctgtgaaacgtaagctacaatta
tataattcaagaggaaaaaaatttgagacatttaatggttttgaattaactgtgccagat
attccacgtgaattatgttggtgtggtgaaacattaattttgggttttcgtggattatca
tacacaactttgaatttaaatggaaaaaccaaagaattatttccaactggaaaatctcct
gaaccaagtgttacaaaattgtctgataattcctttgtactaggaaaagattctcaatca
tttgttatggataccagaggagaactgattcaacataatccagtaaaatggtctgataca
ccaagtgcattagcttgggatgatccttatttacttggaattgttcatgacagattagaa
gtatatactatagagggttgtctgcatattcaaacaataaaagatctaaacaaagctagg
cttatatacagatgcaaacaagggaaagtttttgtagcatcaattagtcatgtttggtgt
gtgagagcagttgatgtaacacatcaaattagaacattactagagcaaactcagtttcag
ttagcaataaaattaactagcttatccgatataacagaagaagaaaaacataagcaaata
tataaaattcaaacattgtatgctcatcatctgtttcgtaacaaaagatttcaagaagca
atggatcagttcttaaaaataggaacagatccttatgaagtgataatgttatttcctgat
ttagttacaccatctagcagtaatcctgaagtcagtgatccaactttgcctaaactccaa
gaccatgatttagaaaaaggtctacgtgcattaataatttttcttactgaagttagatat
aagttaatgggcggtaatgcaaaatccaaggataaggataacaatgaggaaaaatctgta
gtgaatggaaaaaagaatatgacagcagtagctacagaacaattattaaagattatagac
acaactctgttaaaatgttatctacagactactgatgcattggtagcaccattactcaga
ttaaatcattgtcatttagcagaagctgaaaaaactttattaatgcatcaaaaatatcct
gaacttattatattatatcaaaccaagggacaacatagaaaagcattggagcttctggaa
aagcatgcaaaagagaatgattctagtctaaaaggcactgcaagaacgatacaatatttg
cagcaacttggtaaagatcatatggatttaattttgaagtttgctggttgggttttgaat
gaagatccagaacaaggacttcgaattttcatggaagatatgcagcaagttgaactatta
ccaagaccaaaggtattggattatcttctatgtcatcacaaagatttagtgataacatat
ttggaatatgtagtacatgtttgggaagatactaatcctttgttccataatgttttaata
catcaatacaaagaaaaatgtttagcgtgtatgagtgaaaatgctacaccagccgaaaaa
caaacagcccaacatataagacaaaaattgcaacagtttttagaaaaatctacgcattat
actcctgaaacgatattagtacattttccatttgataatttgttcgaggagcgtgctatt
attcttggaagacttggacgtcatcagcaagctatttcaatatatattagtcttcttaat
gatatagcaaaagcaactgagtattgttataacgtatatactagatatcaaaatcaagaa
attgtagataaacaaaaacaatccgatggagctgatgaagtctatgtaatgcttattcaa
caattgttgaaacccgacgataaaggagttttaatcacaggatgtatcccagaaatgcaa
agaacagcagagcctgatttggaaatggcacttgagctgctcgagaagcatgcatcaaag
ataaatccactaaaggcattagagcttctgcctgatacagttcctataggtagaatcaag
tactttttagaagtcagtttgcaggaaaaattaaacactgcaagaaggatacaagtatta
aaaggattactttacgctgaactcttgcaagtacaagagcagcgtatgcattatgaatca
cagagcgttcttatgacggaattcaatatatgtccagtgtgtaaaaagagattcggcaat
cagagtgcgtttgcgaggtatccgaatggcgatattgtacattattcgtgtcaagatcgt
aaggcataa

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