Bombus impatiens (common eastern bumble bee): 100743539
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Entry
100743539 CDS
T04362
Name
(RefSeq) ATP-dependent RNA helicase Ddx1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
bim
Bombus impatiens (common eastern bumble bee)
Brite
KEGG Orthology (KO) [BR:
bim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bim03041
]
100743539
03016 Transfer RNA biogenesis [BR:
bim03016
]
100743539
Enzymes [BR:
bim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100743539
Spliceosome [BR:
bim03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
100743539
Transfer RNA biogenesis [BR:
bim03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
100743539
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
100743539
NCBI-ProteinID:
XP_003486759
UniProt:
A0A6P3DTV8
LinkDB
All DBs
Position
Unknown
AA seq
733 aa
AA seq
DB search
MTAFEEMGVLPEIAKAVDEMEWTLPTDVQAEAVPLILGGGDVLMAAETGSGKTGAFCLPV
LQIVWETFKDLESGKTGKTSSNNGHQQHSSHWSLSLFDRGKALAVTPDGLRCQSREQKEW
HGCRANKGILGKDKYFFEAIVTDEGLCRVGWSTSQASLDLGTDKFGFGYGGTGKKSNAKQ
FDNYGKAFGMHDVVGCLLNLSKGEISFTLNGVGLGPAFTLNAQQKSQTFYPAVVLKNAEM
SFNFGAQPFKYPPPNDYIAVASAPKEVINENPINSSQTHKENGKPKCNAPQAIIMEPSRE
LAEQTYNQIQKFKKHLKDPVIRELLVIGGVSVKEQIATLNSGVDIVVGTPGRLEDLIQGG
YLSLTHCRFFILDEADGLLKQGYTELIDRLHRQIPKITSDGKRLQMIVCSATLHAFEVKK
MAERLMHFPTWVDLKGEDAVPETVHHVVVIIDPQKDKSWHNLRKHIETDGIHSRDNIRPG
NNNPETLSEAVKILKGEYCIRAIKEHNMDRAIIFCRTKLDCDNLERYLKQSGGNQFSCVC
LHGDRKPAERKSNLEKFKRQEVKFLICTDVAARGLDISGLPFMINMTLPDEKSNYVHRIG
RVGRAERMGLAISLVSKVPEKVWYHGEWCPSRGRNCSNTNLTDKGGCCIWYNEPNYLAEI
EDHLNVTIQQVDADIKVPLNDFDGKVVYGEKKAAMGSNYQNHVQQMAPYVNELSSLESKT
QLLYLKRHMVKTS
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgacggcattcgaagaaatgggtgttttacccgaaatcgcgaaagcagttgacgaaatg
gagtggacattgccaactgatgttcaagctgaggcagttccactaattttgggtggtgga
gatgtgttaatggctgcagaaactggcagtgggaaaactggtgccttttgtctaccagtt
ttgcaaattgtctgggaaactttcaaggatctagagtctggtaaaacaggcaagacttcg
agcaataatggacatcagcaacattcttcacattggtcgttaagtttatttgatagaggt
aaagcattagctgtgactccggatggcttacgatgtcagagtcgtgaacagaaagaatgg
catggctgtagagcaaacaaaggaattctagggaaagacaaatacttctttgaagctata
gtaactgatgaaggattatgtcgtgtaggctggtctacgtctcaagcttcactggattta
ggaacagataaatttggttttggatatggtggtactggcaaaaaatcaaatgcaaaacaa
tttgacaattatggaaaggcttttggaatgcatgatgttgttggatgtcttctaaattta
tcaaagggagagattagcttcacattgaatggtgtgggtctgggtccagcatttactctg
aatgcacaacaaaaatcacagactttttacccagctgtagtattgaaaaatgcagaaatg
tcattcaattttggagcacagccatttaagtatccccctccaaatgattatatagctgtt
gcttcagctcctaaggaagttataaatgagaatcctataaacagtagccaaactcataag
gaaaatggcaagcctaaatgcaatgcccctcaagctataatcatggaaccttcgagagaa
cttgctgaacaaacatataatcaaattcaaaaatttaaaaaacatttgaaagatccagtc
attagagaattgttagttattggaggagttagcgtaaaagaacaaattgctacattaaat
tccggtgtggatatagtagttggaacaccaggtcgtttagaagatttaatacaaggcggc
tacttgtccttaacacattgcaggtttttcattttggatgaagccgatggtttattgaag
caaggctacacggaattaatcgatcgtttgcacagacagataccaaaaattacatcagat
gggaaaagattacaaatgatcgtttgttctgccacactgcatgcatttgaagttaaaaaa
atggcggaacgtttgatgcactttccaacgtgggtagacttaaaaggtgaagatgcagtt
cccgaaacagtacaccatgttgttgtaataatcgatccacagaaagataaatcttggcac
aacttaaggaaacatatagaaactgacggtattcatagcagggataacataagacctgga
aataacaatcctgagacactctcagaggctgtgaaaatactaaaaggtgaatactgtatt
cgtgccattaaagaacacaacatggacagagctataattttctgtagaactaaattggac
tgcgataacttggaacgatatttgaaacaatctggtggaaaccaattttcatgcgtatgt
ctccatggtgatagaaaacctgcggaacgcaaatctaatttagagaagttcaaaaggcag
gaagtaaagttcttgatttgtaccgatgtcgcagctagaggtttagatatttcgggatta
ccttttatgattaatatgaccctacctgatgaaaaatccaactacgtacatcgcataggt
agagtcggtagagctgaacgaatgggtctagcaatttcattagttagtaaagttcctgaa
aaagtgtggtatcacggcgaatggtgtccttctcgtggaaggaactgttccaatactaat
cttactgataagggtggttgttgcatttggtacaacgaaccaaactacttggctgaaatt
gaggatcatttaaatgtcacgattcaacaagtcgatgcagatataaaggttccattaaat
gatttcgatgggaaagttgtatacggagaaaagaaagcagccatgggttcaaattaccaa
aatcatgtgcagcaaatggcgccctacgtgaacgaattatcttctttggaatcaaaaaca
caacttttatatttgaagaggcatatggtaaaaacgagctaa
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