Bombus impatiens (common eastern bumble bee): 100743697
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Entry
100743697 CDS
T04362
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
bim
Bombus impatiens (common eastern bumble bee)
Pathway
bim03022
Basal transcription factors
bim03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bim00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100743697
09124 Replication and repair
03420 Nucleotide excision repair
100743697
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bim03021
]
100743697
03036 Chromosome and associated proteins [BR:
bim03036
]
100743697
03400 DNA repair and recombination proteins [BR:
bim03400
]
100743697
Enzymes [BR:
bim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
100743697
Transcription machinery [BR:
bim03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
100743697
Chromosome and associated proteins [BR:
bim03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100743697
DNA repair and recombination proteins [BR:
bim03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
100743697
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
HBB
Helicase_C_2
DEAD
ResIII
AAA_11
nSTAND3
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
100743697
NCBI-ProteinID:
XP_012249897
UniProt:
A0A6P3V771
LinkDB
All DBs
Position
Unknown
AA seq
759 aa
AA seq
DB search
MKISVDGLLVYFPYDYIYPEQYAYMLELKRGLDAKGHCLLEMPSGTGKTITLLSLIVAYM
LENPLDVTKLIYCSRTVPEIEKVIEELKKLMDYYEKETESKPKIVGLVLSSRKNMCIHPE
VSREREGKIVDGRCHSLTASYVRERHNYDESTPICNFYEGFDMEGKEQFMPPGIYSIDDL
KEYGRDRNWCPYFLARFTILHAQIVVYSYHYLLDPKIAETVSKELSKSSVVVFDEAHNID
NVCIDSMSVKINRRTLEKSSANIQLLEKTVAEMREDDVNKLKEEYERLVEGLKDAHVARE
TDIILANPVLPDEILQEVVPGNIRNAEHFVGFLRRFVEYLKTRLRVQHVVQESPAAFLRD
VQTKVSIERKPLRFCAERLASLLRTMEITDLTDFSPVILVTHLATLVSTYTKGFTIIVEP
FDDKTPNVLNPILHFVCLDSSIAIKPIFDRFQSVVITSGTLSPLDMYPKILNFHPVIMSS
FTMTLARPCLLPMIVAKGNDQVAISSKYETREDVAVIRNYGQLLVEFAATVPDGLVCFFT
SYLYMESVVAAWYDQGVVDQLQRHKLLFIETQDSAETSLALINYIRACENGRGAVLLSVA
RGKVSEGVDFDHHLGRAVLMFGIPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA
AQCVGRAIRGKTDYGIMVFADKRFSRMDKRSKLPKWIQEHLTDSLCNLSTEEAVQISKRW
LRQMAQPFTRENQLGLSLLTREQLEKEEYGKIEQKAQQN
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcagcgttgacggcttacttgtatattttccttacgattacatttatccagaa
caatatgcatatatgctcgagctcaaacgtggcctggatgctaaagggcactgtttattg
gaaatgccatcaggcactggaaaaactataactttgttatcattaattgtagcatatatg
ttggaaaatccattggatgtgacaaaattaatttattgttcccgtactgtaccagaaata
gaaaaagtcatagaagaattaaaaaagcttatggattattatgaaaaagaaacagaaagt
aaacctaaaattgttggcttagttcttagttcacgaaaaaatatgtgtattcatccagag
gtaagcagagaacgtgaaggcaaaattgttgatggtcgttgtcattctctcacagcatca
tatgttcgtgagagacataactatgatgaatcaacaccaatttgtaatttttatgaagga
tttgatatggaaggtaaagaacaatttatgccaccaggcatatattctattgatgatttg
aaagaatatggaagagaccgcaattggtgtccatattttcttgcaaggtttacaatttta
catgcccagattgtagtgtacagttatcattatttattagatcccaagattgcagaaact
gtgtcaaaagaattaagcaaaagttctgtagtagtatttgatgaagctcacaatatagat
aatgtatgcattgattcaatgagtgtaaaaattaatagaagaactttagaaaaaagttca
gccaatatacaacttcttgaaaaaacagtggctgagatgagagaggatgatgtaaataaa
ttaaaagaagaatatgagagattagtagaaggattaaaagatgcacatgttgcaagagaa
acagatattatcttagctaatcctgtcttaccagatgaaattttgcaagaggtggttcct
ggtaatattaggaatgcagaacattttgtcggttttttaagacgatttgtagaatattta
aaaacgcgtctacgtgtgcaacacgtagttcaagaatcacctgctgcgtttctgagagat
gttcaaacaaaagtttcaatagaacgtaaaccattaagattttgtgcagaacgactagct
tctcttttacgtactatggagataaccgatttaaccgatttttcaccagttatattagtg
acacatctggcaacattagtatctacatatacaaaaggatttacaattattgtggagcca
tttgatgacaaaacacctaatgttttaaatccaattcttcattttgtttgtttagattcg
tctattgcaataaaacctatatttgatagatttcagtcagtagtaattacttcaggaaca
ttgtctccattagacatgtatcctaaaattttaaattttcatccagtcataatgtcatct
tttactatgacattagccagaccttgtctcttaccaatgattgtagcgaaaggtaatgac
caagttgcaatttcgtcaaagtatgaaacaagagaagatgttgctgttataagaaattat
ggtcaactattagttgaatttgcagctactgttcctgatggtttagtctgtttttttacc
tcctacttatacatggaatctgtcgttgctgcatggtatgatcaaggtgtggtagatcaa
cttcaaagacacaaattactatttattgaaactcaggattccgcagaaacgagtttagct
cttataaattacatacgagcatgtgaaaatggaagaggtgctgttctcctttctgtggca
cgtggtaaagtatcagaaggagttgattttgatcatcatttgggaagagctgttttgatg
tttggaattccttatgtgtatacacaatcgcgtattttaaaagcacgactagaatatctt
cgtgatcaatttcaaatcagagaaaatgattttttaacttttgatgcaatgagacacgca
gcacaatgtgttggaagagcaattagaggaaaaactgattatggtataatggtatttgca
gacaagagattttcgagaatggataaacgaagtaagttaccaaaatggatacaagaacat
ttaactgatagtttatgtaatttatcaaccgaggaagctgtgcagataagtaaacgttgg
ttacgacaaatggcccaaccatttacacgtgaaaatcaattgggattatccctattgaca
cgagaacaacttgaaaaagaagaatatggcaaaattgaacagaaggcgcaacaaaattag
DBGET
integrated database retrieval system
