Bombus impatiens (common eastern bumble bee): 100743872
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Entry
100743872 CDS
T04362
Name
(RefSeq) zinc finger SWIM domain-containing protein 8
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
bim
Bombus impatiens (common eastern bumble bee)
Brite
KEGG Orthology (KO) [BR:
bim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bim04121
]
100743872
Ubiquitin system [BR:
bim04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
100743872
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
100743872
NCBI-ProteinID:
XP_012245289
UniProt:
A0A6P3V0L0
LinkDB
All DBs
Position
Unknown
AA seq
1755 aa
AA seq
DB search
SVAVDNVAGQSSAPQIIEWEETDRYSFDDSDRFEEDSLCSWSSEPESLCNNWRGWRRPTA
GFGITKKFTEDGQTVPTLCELAARCVASHIPFELVEHVYPPVPEQLQLRIAFWSFPDNEE
DIRLYSCLANGSADEFQRGEHFFRSRSVKDPLQIGFHLSATVNSQGLLNGVRSQFNVAVT
FDRRKITSCNCTCSSKAYWCAHVVAVCLHRIHMPTQVCLRAPVSESLSRLHREQLQKFAQ
YLISELPQQILPTAQRLLDELLSVQPSTINSYCGAPDPTAGASAHDQTSWYLDEKTLHDN
IKKILIKFCVPAPIVFSDVNYLSTTAPPAAAEWSSLLRPLRGREPEGMWNLLSIVREMFK
RTDRNAIPLLEIITEECMACEQILVWWFNTKVALLNGTGYGGKHNMNSNVHASQHACSSL
CDEIVVLWRLAALNPGLSPAERDMLHGQFTAWHMKIIDKVTKSRGSSVTHNSHNRNNGGG
HKDSLKNDLAVFTGFKSALEACYLDWEEYTLPGITYTAGSNPMYHCPFTCFRHAGDTRTE
VNQVNSSAAVLNCQPPVSHHHGRRPLSLGLVEFSYMDRRRLNPRECSGLCSRSGGGDGNR
SSVSSEGFCENETDMPDIAEPQVVLVRRSCAQLNNCGDTDSQEGGGSESSSNSNVSLKNA
QNSDKHRSNASSETHSDSSDSSNNKAACDAKCSRTNLDYREKSRTVLPKGNSSKSEQESD
LEKDPSRRPSKDESSSSSSDSPSGDEYHVYYYDPKAVVNGASGKDSKNESQSTSTANAST
VLGNLMKTEDPWDILFARAEGLYAHGHTREACILGVQLGEELLANPPNLMIDEPPAPVKG
KKKKQQVNPASHQLTCLASATLAKCCFLCTVLAENPEYYNLAFRVGLFGLEMARPPANTK
PLEVKLAHQESELVGLLKKIPLGPAELAMVRQRAEQLRDGVLRSRGHALLPIMLASFIFD
ALNTSRVKHLSSDVDENLGFDAAVAALGLKANVSEADHPLLCEGTRRQRGDLAITLLVHY
KDDPTKVARIMDKLLDRDVHQLIKSPILSSYYTSNPPTKSEMTRYLHDEECSSPLARMDA
GNGDSVVGTSSRPHSSTSAELESGMSALTVQTQIVQQPVPARAKETRYKSKRVYPSIPNQ
PSEAGAHFMCELAKTVLTKAGGNSSTSLFTQASTSQNHHGPHRALHMCAFQLGLYALGLH
NCVTPNWLSRTYSSHVSWITGQAMEIGAPAISFLIESWEGHLTPPEAVGIADKSSRGSDP
NMVRAAAELALSCLPHAHALNPNEVQRAILQCKEQSDLMLEKACITVENTAKGGGVYPEV
LFQVAKYWYELYLRHTPGGEQQDDMPHDPLQLDLNGVLLVESGPPVDMTTAQMMPGPTQT
VVVTSTQPPPQPYPTHPTITTLAPLGVGMPYAVSPYSFVHPHHSIPTFGGPMPSHRVTLP
PAPPHMQMYHAAFPPHPGHPQHPQHPQHPQHPQHPPHPPHPQHPQHPHHPSQSAQPPSLP
PYYTSQPQPPPGTHHLFTMQQPMPVNVQAGVTGPIPGQNNMPGSALVQAQPIISTVRTQP
QVHRQTQPFSQQQLRSLVAAYRVGMLALETLARRVHDDRPQAKYARNPPYGEDVKWLLRV
SKRLGTQYLHQLCICTVNSIVSPFVLHDVALEAALFLARNNRALVLQHLRSALLAPLVLK
CQQMYIQCMHQKLYHLTAGEYEDFVNVVCAARAAFHITPEGHVQFKERLQSIKRSQSCTK
ELWAQINAALQQNSK
NT seq
5268 nt
NT seq
+upstream
nt +downstream
nt
tccgtggccgtggataatgtcgccggtcaatcgagtgctcctcagataatcgaatgggag
gagaccgatcgttactccttcgacgattctgaccgtttcgaggaggattctctgtgcagc
tggagcagcgagccggaatcgttgtgtaataattggaggggatggcgacgacctaccgct
ggtttcggcattaccaagaagtttacggaagatggacaaacagtgccgacgctgtgcgaa
ctcgccgcgcgatgtgtcgcctctcacatcccgttcgaactggtggagcacgtttatcca
ccggttccagagcaattgcagctcaggatagcgttctggagttttccggacaacgaggaa
gacatcagactctactcttgtttggcgaacggaagcgcggacgaattccagcgtggagaa
cacttcttccggtcgaggagcgtcaaagatcccctacaaatcgggttccatctgagcgcc
acagtaaattcacaggggttgctgaacggggtaagatcacagttcaatgtggctgtgacg
ttcgatcgacggaagatcacgtcgtgcaactgcacttgctcctctaaggcctattggtgc
gctcatgtggtcgccgtatgtcttcacaggatacacatgccgacacaggtgtgcctgaga
gctccagttagcgaatccttgtcacgtttgcaccgggaacaactgcaaaagttcgcgcaa
tatctcatcagcgagttaccacagcagattttgcccactgcccaacgattgttagacgag
ctgctgtcggttcaaccgagtaccatcaacagttattgcggtgccccggatcccacggca
ggtgcctcagcccacgatcaaacgtcttggtatctcgatgagaagacactgcacgacaac
atcaagaagatcctcatcaagttctgcgtgcccgctccgattgtcttcagcgatgttaat
tatctaagcaccactgcgcctcctgcagccgccgagtggtcctcgttgctgcgaccgttg
cgtggtcgcgaaccggaaggcatgtggaacttgctgtcgatcgtgcgcgagatgttcaag
agaaccgatcgcaacgctataccattgttggagatcatcaccgaggagtgtatggcatgc
gagcagatcctcgtgtggtggttcaacacaaaggtagctttgttgaacggaaccggatat
ggcggtaagcacaacatgaacagcaatgtgcacgcctcgcagcacgcctgctcgtccctc
tgcgatgagattgtcgtcctatggcgactggctgccttgaatcctggattatcgcccgcc
gaacgagatatgctccacggacagtttactgcttggcacatgaagatcatcgacaaggta
acaaaaagtcggggcagttcggtgacgcacaattcacataacagaaataatggcggtggt
cacaaggattcattgaagaacgacctggctgtgttcaccggatttaaatcggcgctcgag
gcgtgctatctggattgggaggagtacaccttgcctggtatcacgtacaccgccggaagc
aatcccatgtatcattgtccattcacctgctttcggcatgctggcgatactaggaccgag
gtgaaccaggtgaattcgagtgcagccgtgttaaactgtcaaccgcccgtttcccatcac
catggtcgacgaccattgagtttaggcctggtagagtttagttatatggatagaaggcgg
ctgaacccgcgggagtgttcaggactatgttcacgaagcggtggcggtgatggaaaccga
agcagcgtcagctcagaaggtttctgcgagaatgagaccgacatgcccgacattgctgaa
cctcaagtagttctcgttagaagatcttgcgctcaactaaataattgcggggatacagac
tcgcaggagggtggtggcagcgagtcgtcctcgaacagtaacgtcagtctgaagaacgct
caaaactcggacaagcaccgctcaaatgcttcgtccgagacccatagtgatagtagtgat
agtagtaataacaaagctgcctgcgatgcgaagtgtagcaggacgaatctcgactatcgg
gagaaatcgcgaacggtgttgcctaaaggaaatagttcgaagagcgagcaggagtctgac
ctagaaaaggatccttccagaagaccatctaaggacgagagctcttcgtcgagtagcgac
agcccgtctggtgacgagtatcatgtttattattatgatcctaaagctgtggtgaatggc
gcttcgggcaaagactccaagaatgaatcacaatcaacgtctactgcaaacgcgagtaca
gtgttgggcaatctaatgaaaacagaagatccgtgggacatcctattcgctagggctgag
ggactctacgctcacggccacacgagggaagcttgtattttgggtgttcaacttggcgag
gaactgttggctaatccaccaaatctcatgatcgatgaacctccggcgccggtgaagggg
aaaaagaagaagcaacaagtaaacccggcgtcccatcagctcacgtgccttgcgtccgcc
accttggccaaatgttgcttcctgtgcacggtcctcgcggagaacccggaatactacaat
ctagcgttcagggttggcttgtttggtctcgagatggctagaccacctgccaacacgaaa
ccgttggaggttaaattggctcatcaggaaagcgagttagttggattattaaagaaaatc
ccacttggtccagctgaattggcaatggttcggcaaagagcggaacaactgagagacgga
gtactaagatccagaggtcacgcgttgcttccaatcatgttggctagcttcatattcgac
gcccttaacacgtcaagagtaaaacacctgtcctcagacgttgacgagaatcttgggttc
gacgcggccgttgctgctttgggcttgaaggcgaatgtgagcgaagctgatcatcctctt
ctttgcgagggaactagacgccagagaggagatttggccatcacattgcttgttcactac
aaggatgatcctacaaaggtagcgagaatcatggataaattgttggatcgagatgttcat
caattgattaagtcaccaatccttagtagctattatacctctaatcctccaactaagagt
gagatgacaagatatcttcatgacgaagagtgttcttctccccttgctagaatggatgct
ggaaatggtgatagtgtcgttggtaccagcagcagaccacatagcagtaccagtgcagaa
ttggaaagtggtatgagtgcactcacggttcagacacagatcgttcaacaacctgtgcct
gcaagagctaaagaaacaagatataaaagcaagagagtatatccatcaatccccaaccag
ccatcagaagcaggcgcacactttatgtgtgagttggcaaagactgttctcacaaaagct
ggtggtaacagttccacctctttattcacgcaagcatccacgagtcagaatcatcatgga
ccacacagagctctccacatgtgtgcttttcaacttggtctctacgctcttggacttcat
aactgcgtcactcctaactggctcagtcgtacctactccagtcatgtatcctggatcact
ggtcaagcgatggaaataggagcaccagcgatctcgttcctaatcgaaagttgggaggga
catttaacgcctcctgaagctgttggtatagccgacaaatcgtccaggggaagcgatcct
aatatggttcgagcagccgcagaacttgctctgtcttgcttaccacacgctcacgcgctc
aatcctaacgaagtacagagggccattttgcagtgtaaggaacaaagtgatctgatgtta
gagaaagcttgcatcacggtggagaacacggcaaagggaggcggtgtttatccagaagta
ctgtttcaagtggccaaatattggtacgagctgtatctcaggcacactcctggtggagaa
cagcaagatgatatgccacacgatcctcttcaactagatcttaacggagtgcttctggtg
gaatctggtcctccagtggacatgaccactgcacaaatgatgcctggaccaactcaaacg
gttgttgtgaccagcacacaacctcctcctcaaccatatccaacgcatccaactataacc
acgctagcgcctttaggagttggtatgccatatgcagtgagcccttacagttttgtgcat
cctcaccattcaattccgacctttggtggaccaatgccatcacatagggtaactctacca
ccagcaccaccacatatgcaaatgtatcatgcggcatttccgcctcatccgggtcatcca
cagcatccgcaacatccccaacatccccaacatcctcagcatccaccacatccgccacat
ccacagcatccgcaacatcctcatcatccgtcacaatctgcgcaaccaccatcgctgccg
ccatattacacgtcgcaaccgcaaccaccaccgggaactcatcatttgttcaccatgcaa
cagcctatgccagttaatgttcaagctggagttacgggacccattcccgggcagaacaac
atgcctgggtctgctctagttcaggcacagcctataatatccactgtaagaactcagcct
caggtccatagacaaactcaacccttcagtcagcagcagcttcgttctctagttgctgca
taccgtgtgggaatgttagcattggaaacgttagctcgtcgcgtacacgacgacagacct
caggcaaaatacgcgcggaatccaccttatggggaagatgtgaaatggttgttaagagtg
tcgaagcgtctcggcacacaatatcttcatcaactttgtatttgtacagtgaacagcatc
gttagtcccttcgttcttcatgacgttgcattggaagcagcgctttttttggctagaaac
aaccgggctcttgtacttcaacatttgagatctgctcttttggctcctcttgtccttaag
tgtcaacaaatgtacattcagtgcatgcatcagaagctataccacttgacggcaggtgag
tacgaagactttgtcaacgtagtgtgcgcggctagagcagcgtttcacattactccggag
ggccatgttcagttcaaggagcggcttcagtccattaaaagatctcaatcctgtaccaaa
gaactgtgggcacaaatcaacgcggcactacaacagaacagcaaatga
DBGET
integrated database retrieval system
