Bombus impatiens (common eastern bumble bee): 100745061
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Entry
100745061 CDS
T04362
Name
(RefSeq) protein PAT1 homolog 1 isoform X1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
bim
Bombus impatiens (common eastern bumble bee)
Pathway
bim03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100745061
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bim03019
]
100745061
Messenger RNA biogenesis [BR:
bim03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100745061
mRNA degradation factors
5'-3' decay
Decapping complex
100745061
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
100745061
NCBI-ProteinID:
XP_003492090
UniProt:
A0A6P3DZV0
LinkDB
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Position
Unknown
AA seq
730 aa
AA seq
DB search
MADFFFGFDTSLANNSLEDGLGCPFEEDDLGEEEEYDALNDETFGSEATIGDWEKDHEKL
AEITESSRPHHQSTLDKKNVTDTDIEDNLSHLVLDEKEGIIPRPGVWDCPSNLSLPKLRP
PLSLTSPLTNVCTVEQLEKGLIANRPPPRLNKPVQTQQQQHQQQQKSDGSLLFESLSAPP
RFPPGLGIPPPHPVVLPPNVRFHHPQFLQHPRLLPNQTGNVLRYPLAAHLMLPHTAQRQP
IHNSFCNNFPPQAPLSNLCPPPFLRADHSIIPPFSSNQTGHQQQQHSFSHSGNQRNQNRA
FHHGEQQGNHQPFFKNNQYHRNHDRNNQRQYHYNHHCQGINGVIGSGEYDEYAGLMSSRE
KQWLINIQLLQLNTNEPYVDDYYYIVFCDRRNRQSINQEQKDKKQHNNNNNNSYHRDSRD
REQPHVLSRPIYIPAQFENSLGKLQFASVIAPRKVIDMDVVPNSDPQLTTQIQQKDTKRT
RQLLLEIERLYIIQLRLEDLHNPLALLNEQQQNQEGENEANNHKKSSTDLINMMLSAFLQ
LIQDDKLPSMLSIRKGKTLLLRFFPYLNVTEHRNQLEEIWNVIFRGLAMIGRRDSHLLMS
LHSEFQRWFDTVHNFGTILRLARSLSDSASQPIKNNSLAFALTNKFGVSVIASMFEQAEK
LYTTDDSSSSDWSSFITNIIEIIGETPPCVAPCRPIAANTLNQHLNRLSHLKCGRYTTLE
LLLTDANPSR
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggcagacttctttttcggttttgatacgtcgcttgcaaataacagtttagaggatggt
cttgggtgtccattcgaggaagatgatctgggagaagaggaagaatacgatgctctaaac
gatgaaacatttggttctgaagctactattggcgattgggagaaagatcatgaaaaactt
gccgagattacagaatccagtcgtcctcatcatcaaagtactttagacaaaaaaaatgta
actgatacagatattgaagataatttatcccacttggtactagatgagaaagaaggtatc
attccacgccctggagtatgggattgtccttccaacttatcccttcctaaacttcgacca
ccattaagcttaacatccccattaaccaatgtttgtacggttgaacaactagaaaaggga
ttaattgcaaacaggccaccacctagattaaataaacctgttcagacgcagcagcaacaa
catcaacaacaacagaaatccgatggatcgcttttgtttgaatctttatctgcaccgccg
cgcttcccaccggggttgggtataccacctccgcatcctgttgttttaccaccaaacgtg
agatttcatcatcctcagtttttacagcaccctagattattaccaaatcaaactggaaat
gtattaagatatcctttagcggcacatttgatgctcccacatactgctcagcggcaacca
attcataattcattttgcaataattttccaccacaagcaccgctttcgaatttatgtcct
cctccatttctacgagccgaccatagcataatacctcctttctctagcaatcagactggt
catcagcaacagcaacattctttttcgcattctggaaatcaaagaaatcaaaatagagct
ttccaccatggggaacaacaaggaaatcatcaaccattttttaagaataaccagtatcat
cgtaaccatgatcgaaataatcagcgacaatatcattataatcatcactgtcaaggaata
aatggtgtgataggttcgggagaatacgatgaatacgccggtctcatgagtagtcgagag
aaacagtggttaattaatattcaattattgcaacttaacacaaacgagccatatgttgac
gattattattatatcgttttctgcgacagaagaaacagacagagtataaatcaagaacaa
aaagataaaaagcaacacaacaataacaataataatagttatcatagagattccagggat
cgagaacaaccacatgtgctttcaaggcccatatatataccagcacagtttgaaaattct
ttgggaaaattacagttcgccagtgttattgcaccgcgaaaagtcattgacatggatgtt
gtaccgaatagtgatcctcaattaactactcaaatacaacaaaaagatacgaaacggaca
aggcaattgttactggaaattgaaaggttatatataatccaattgagactagaagatctg
cacaatcctttggctctgcttaacgaacaacaacaaaatcaagaaggcgaaaacgaagca
aataatcataagaaaagcagtacagatttaataaatatgatgttatcggcttttctccag
ttaatacaagatgataaattaccaagcatgctaagtattcgaaaaggaaagacgctatta
ctgaggtttttcccatatttgaatgtaacggaacatcgcaatcaattagaagaaatatgg
aatgtgatatttcgaggattagctatgataggacgtagagattcccatctattgatgagt
ctgcattcggaatttcaacgttggttcgataccgtacacaacttcggtacaatacttcga
ctagctcgatcgctgtctgactccgctagtcaaccaatcaagaacaacagtttagctttt
gcactgacaaataagtttggtgtatctgtaattgcttcgatgttcgaacaagcagaaaaa
ttatataccacggatgattcttcgtcttcggattggtcatctttcataacaaacatcatc
gaaataattggtgaaactccaccctgtgtcgcaccttgtcgaccgattgctgcaaatacg
ctcaatcagcatttaaatcgactatctcatttaaaatgtgggagatatacaactctggaa
cttctactaactgatgccaatccttctcgatag
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