Entry |
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Name |
(RefSeq) probable ATP-dependent RNA helicase DDX17 isoform X1
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KO |
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Organism |
bim Bombus impatiens (common eastern bumble bee)
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Brite |
KEGG Orthology (KO) [BR:bim00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:bim03041]
100746076
Enzymes [BR:bim01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100746076
Spliceosome [BR:bim03041]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
100746076
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
Unknown
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AA seq |
566 aa
MGRYRSRSRDRDRRRRSRSRSRSRSPRDRRNWGSSGGRDRGGGRNSRGQPGANLRKPRWD
LSRLEPFKKDFYVPHEAVQNRDLRIVEQYRSEKEITLKGKNIPNPVFTFEETGFPDYVLK
EIKRQGFTEPTSIQAQGWPIALSGRDMVGIASTGSGKTLSYILPAIVHINSQPKLGRKDG
PIALVLAPTRELAQQIQQVADDFGHSSGIRNTCLYGGAPKGAQARDLDGGVEIVIATPGR
LLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVK
NLAEDFLKDYAQINVGSLQLAANHNILQIIDVCQDYEKENKLSTLLKEIMAESENKTIVF
IETKRRVDEITRKMKRDGWPAVCIHGDKTQQERDWVLQDFRSGKAPILVATDVAARGLDV
EDVKFVINFDYPSCSEDYVHRIGRTGRRQKTGTAYTFFTPNNSNKANDLIQVLKEANQVI
NPKLLELADSKSGGYGRHRGGRNRWRSRGGRNGKDRSYSRSRSRSHSREHNGRGNRRSYS
RSYSRSRSPVSNRTEVIGKSYWSSER |
NT seq |
1701 nt +upstreamnt +downstreamnt
atgggccgctataggagtcgtagtcgtgacagagataggagacgtagatctcgcagtaga
tctcgtagcagatcaccaagagatagaagaaattggggcagtagtggaggtagagatcgg
ggtggtggcagaaacagccgtggtcaacctggagcaaatttaagaaaacctagatgggat
ttaagtcgattggaacctttcaaaaaagatttttatgtaccacatgaggcagttcaaaat
cgtgatttacgtatagttgaacagtacagaagcgaaaaagaaatcactctaaaggggaaa
aatatacctaatcctgtattcacatttgaagaaacaggttttccagactatgttctaaag
gagataaagcgacaaggttttactgaacccacatcaatacaagcacagggatggccaatt
gctttaagtggaagagacatggtaggaattgcatcaacaggttctgggaaaacattatct
tatatactcccagcaattgttcacattaatagtcaacctaagttaggacgaaaggatgga
cctattgctttagtgctagctccaacgcgagaacttgcacaacaaattcagcaagttgct
gatgattttggtcattcctctggtattagaaacacttgtctatatggtggagcaccaaaa
ggtgcacaggccagagatttagatggtggggtagagattgtcatagctacacctggtaga
ttattagactttcttgaatcagggcgtacaaatttaaaaaggtgtacctatttagtatta
gatgaagcagatagaatgttagatatgggatttgaacctcaaattagaaagatcatagaa
caaattaggccagatagacagacattaatgtggtcagctacatggcccaaggaagtaaaa
aatttagctgaagattttttaaaagattatgctcaaattaatgttgggtccctacagtta
gctgcaaatcataatatattacaaattattgatgtatgtcaagactacgaaaaagaaaat
aaattaagcacacttttaaaagaaataatggcagaaagtgaaaacaaaactatagtattt
attgagacaaaacgcagagtggatgaaataacgagaaaaatgaagagagatgggtggcca
gctgtttgtatacatggtgacaagacacagcaagaaagggattgggttttacaagatttt
agatcagggaaagcgccaattcttgtcgcaacagatgttgctgctcgtggtcttgacgtt
gaagacgtcaagtttgtcatcaattttgactatccctcctgttcggaagattacgttcat
cgaatcggtcgaacaggtcgtcgacagaaaactggtacagcatataccttttttacacct
aataattcgaataaggctaacgacctaatccaggtattaaaagaagcgaaccaagttatc
aatccaaaattacttgaacttgccgatagtaagagtggtggatatggcaggcatagaggc
ggaagaaatagatggcggtctcgaggtggccgaaacggaaaagatcgtagttattcaaga
agtagaagtcgaagtcacagtagggaacacaacggtcgtggtaatcgtcgtagttacagt
cggagttattctcgaagtcgtagccctgttagcaatcgtacagaagttattggtaagagc
tactggagtagcgagagatga |