Bombus impatiens (common eastern bumble bee): 100746085
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Entry
100746085 CDS
T04362
Name
(RefSeq) ATP-dependent RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
bim
Bombus impatiens (common eastern bumble bee)
Pathway
bim03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100746085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bim03019
]
100746085
03012 Translation factors [BR:
bim03012
]
100746085
Enzymes [BR:
bim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100746085
Messenger RNA biogenesis [BR:
bim03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
100746085
Translation factors [BR:
bim03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
100746085
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_C
HA2_N
AAA_22
nSTAND3
ResIII
ATPase
AAA_14
NPHP3_N
AAA_19
ABC_tran
PhoH
NB-ARC
NACHT
Sigma54_activat
RsgA_GTPase
AAA_16
AAA_23
Motif
Other DBs
NCBI-GeneID:
100746085
NCBI-ProteinID:
XP_003486528
UniProt:
A0A6P3DTF6
LinkDB
All DBs
Position
Unknown
AA seq
977 aa
AA seq
DB search
MSRPYGLFSAQRMYSRHRYGDRGESSQSGGSHFERDNHGRGRGGGHPPWLRGKEIGLYYR
DKAKQKSKKKETRGIKLPEHLQEKIEHVLNNSKGYYEKLYNSAYTEDTYDVLENKYVHIR
DSQFKRKFMNMVSGNMQENLARALLVKSKLERDIELDKKLLNEHRTLQSTQEYENMKQFR
LKLPSYHKRSKILDLIKENQVIVISGETGCGKTTQVAQYILDDQIEQENGSIVRIICTQP
RRISAISVAERVAAERAERLGKSVGFQIRLEKVLPRDKGSITFCTTGMLLQFMQGDPALK
EFSHIILDEIHERSTESDFILALLKLIIPKRPDLKVILMSATLNSERFSSYYNDCPMIHI
PGFTYPVTEFYLEDILSFTEYQFPASTAIPQDHRKHIKKYKQEQRKRDEFHDVLYPYVRQ
LIATKKYSKEVIEQLRNPNSEKLSLDLIEQLVRYICKTNDPGAILVFLPGMMDIIKLHKI
MLENRQYPQNQYVIYPLHSRMPTVDQKLVFKTPPEGVRKIIIATSIAETSITIEDVVYVV
DCGKMKFGKFDLQKNVQTLEPEWVSLANAKQRRGRAGRVRPGVCYHLYSKAREMALDQYP
LPEMLRTRLEEVILQIKMLQLGKARTFLASVMDPPNMKAIDLSLDLLRTLNALDDEEQLT
PLGYHLAQLPLDPRTGKMIIWASLFSCVEPVFAIAASLSFKDAFYCPLGKEEDARKKKLE
LNMNQFSDHIALSEALRRFEIAYKKSYASSFCREYFLSFSTLKLLSEMKTQFAQHLCRMK
FMDSENPADINANRNSSNITLVKAVVCAALYPNIAVIRRVTKNGTRAWTPEDGSVTIHPS
SVNDRVREYPNPFITYFTKQLSTAIYLHDTTCVSAPILLFTAPKMSIRKERGNYFISLAN
NQMFACDLQSAQLIQKLQEQFNNMLEYKITHPGTVCWNSFEGDVLNAIIELVSQKDEELG
FSNSDIQNCEDDIHDKV
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtccttacggactattttcagcacaaagaatgtattcgagacatagatatgga
gatagaggtgaaagttctcagtcaggagggtcacattttgaacgtgacaaccatggacga
ggcagaggaggaggacatccaccttggttgagaggcaaagaaatagggctttattataga
gataaggccaaacaaaagtccaagaaaaaggaaactcgaggtattaagttacccgaacat
cttcaagaaaaaattgaacacgtgttaaacaattctaaaggatattatgaaaaattatat
aacagtgcatacactgaggatacgtatgatgtgttagaaaataaatatgtgcacattcgt
gactcccaatttaaaagaaaattcatgaatatggtatctggtaatatgcaagaaaatctt
gccagagctttgctggttaaatcaaaattagaaagagatattgaactagataaaaaatta
ttaaatgaacataggacattgcaatcaacgcaggaatatgaaaacatgaaacaattcaga
ttaaagttaccatcatatcataaaagatcaaaaatattagatttgattaaggaaaatcag
gttattgtaataagtggagaaactggttgtggaaaaacaacacaggttgctcagtatata
ttggatgatcaaatagaacaagaaaatggtagcattgtgcgaattatatgtactcaacct
aggaggatatcagctatatctgttgctgagagagttgcagctgagagagcagaaaggctt
ggtaaatccgttggttttcaaatccgacttgaaaaagtattaccgagagataaaggcagc
ataacattttgtactactggaatgttactgcaatttatgcaaggtgatccagccttaaaa
gaattttctcatattatattagatgaaattcatgaaagatctactgaaagtgacttcatc
cttgctttactgaaactaattatccctaaaagacctgatttgaaagttattttaatgagt
gcaacacttaactctgaaagattttccagttattataatgattgcccaatgattcatatt
cctggctttacttatccagtaacagaattttatttagaggacatcctatcctttacagaa
tatcaatttcccgcatcaactgcaatacctcaagatcatagaaaacatatcaaaaaatat
aaacaggaacaacgaaaaagggatgagtttcacgatgtgctatatccttatgtacgacag
cttatagctacgaagaaatattcaaaagaagtaattgaacaattacggaatccaaacagc
gagaaattatctcttgatctcatagaacaattagttaggtacatttgtaaaactaatgat
cctggagctattttagtttttcttcctggtatgatggatataataaagctacataaaatt
atgctggaaaatagacagtatccacaaaatcagtatgttatttatcctcttcattctcgt
atgccaactgtcgatcaaaagctcgtatttaaaacaccacctgaaggagttcggaagata
ataattgcaacttcgatagccgaaacttctataactattgaagatgtagtatatgttgtt
gattgcggaaaaatgaaatttggtaaattcgatctccaaaaaaatgttcaaactttggaa
cctgaatgggtatcgttagctaatgctaaacaaagaagaggtagagcaggcagagtaaga
cctggtgtctgttatcatttgtactcaaaagctagagaaatggcactagaccagtatcct
ttacccgaaatgttaaggacgcgtttagaggaagttattttacaaataaaaatgttacaa
ttgggaaaagctagaactttcttagcaagtgttatggatcccccaaatatgaaagctata
gatctatctttagatttactccgaactctcaacgcgttggatgacgaggaacaattgact
cctttggggtatcatttggctcaattacctctagatccacgtacagggaaaatgatcata
tgggcatcattattttcgtgtgtagaaccagtttttgcaatcgcggcgagtcttagtttt
aaagatgctttttactgtccacttggaaaagaggaagacgcacgaaaaaagaaactcgaa
ttaaatatgaatcaatttagcgatcacatcgcgttatctgaagcattaagaagattcgag
atcgcgtataaaaaaagttatgcaagttctttttgtagggaatatttcctctcttttagt
acgctcaaactactttctgaaatgaaaactcaatttgctcaacatttgtgtcgaatgaaa
tttatggactcagaaaatcccgctgacattaatgctaacaggaactccagtaacataacc
ttagtgaaagcagtagtatgtgctgcattgtatcctaatattgctgttataaggagagtt
acaaaaaatggaaccagagcatggactccagaagatggcagcgttactatacatccgtca
agtgtaaatgatagagttagggaatatcccaacccatttattacatattttacaaagcaa
ctctcgacagcgatatatttgcatgatactacatgcgttagcgcaccaattttattattt
actgctccaaaaatgtctataagaaaagaaagaggaaactattttatcagcttagcaaac
aatcaaatgtttgcttgcgatttgcaaagtgcacaacttattcagaaattacaagaacaa
ttcaataatatgttagagtataaaataacacatccgggaacagtatgctggaatagcttt
gaaggcgatgtattaaatgctatcatagaactggtttctcaaaaagacgaggaattggga
ttttctaattctgatattcaaaattgtgaggatgatattcatgataaagtttga
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integrated database retrieval system
