Bombus impatiens (common eastern bumble bee): 100746380
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Entry
100746380 CDS
T04362
Name
(RefSeq) transcription elongation factor SPT6 isoform X2
KO
K11292
transcription elongation factor SPT6
Organism
bim
Bombus impatiens (common eastern bumble bee)
Brite
KEGG Orthology (KO) [BR:
bim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bim03021
]
100746380
03036 Chromosome and associated proteins [BR:
bim03036
]
100746380
Transcription machinery [BR:
bim03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
100746380
Chromosome and associated proteins [BR:
bim03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
100746380
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
S1
SH2
HHH_3
Tex_YqgF
HHH_9
Spt6_S1
HTH_10
S1_RRP5
OB_RRP5_4th
Tex_N
eIF3h_C
Motif
Other DBs
NCBI-GeneID:
100746380
NCBI-ProteinID:
XP_003489706
UniProt:
A0A6P3DRW3
LinkDB
All DBs
Position
Unknown
AA seq
1767 aa
AA seq
DB search
MADFLHSEAEESEEEKELDDNEKKKLKKIKAMEESDEEEEEDDEDRLREELKDLIDDNPI
EESEGDDSDASGISQKRKKSDDEDFDDRLEDEDYDLIEENLGVKVERKRFKRLRRIQDEE
SEEEQEKEADDDRDAIANELFEGSGDEDERRSERSHRPEVDTFDEEGSEGEYTDADDFIV
DDDGRPIAEKRKKKKPIFSDAALQEAQDIFGVDFDYDEFGKYGEEDYEEEEEEEEEEEED
EYMDDEDAERPRRPKKQLKKKTTRKSIFEIYEPSELKRGHFTDMDNEIRNTDIPERMQLR
TVPVTPVAEGSDELDLEAEWIYKQAFCRPTISIQDAHLNAEAKERARKGPQTIGKIKKAL
DFMRNQQFEVPFISFYRKEYVLPELNINDLWKVYKFDAKWCQLRQRKENLLKLFDKMRNY
QLDEIMKNPDAPLPDNVRLIKDDDIERLKNVQTSEELNDVYHHFMLYYSHEIPAMQEAAR
QKEKEARKEAKIQKRKQQIADAEENGEDPLPEEEADVEEEEETDETLKQAVRTGPYSICR
RAGLDNLAKKFGLTPEHFAENLRDNYQRHEVDQEPTEPLTIANEYCSQILSSSEEVLKAA
QLMVAIQLAREPLVRKCVREMYMERAKISVKPTKKGIKEIDENHPVYGMKYLKDKPVRDL
VGDQFLNLVIAEEDKLITITLSDSIEGNTSNNYVDEMKQLYYRDEFSKNVQDWNALRVGS
VEMALTRIVLPSLKKELKANLIAEAKECVMRACGRKMYNWIKVAPYTCEFPEEEDEEWDT
SKGLRVMGLAYVPEYSQAAFTCLIAPDGECTDYLRLPHIMKRKNSYREDEKTMKEADLLA
IRNFIATKKPHVVVIGGESREAMMIAADIKECIANLVEEEQFPNIKIEICDNELAKIYSN
SNKGVSEFRDYPELLRQAISLGRRMQDPLVEFSQLCTADEEILCLKYHNLQDQLPKDELL
DNLYLEFVNRVNEVGVDVNKAVQQAYCGNLVQFVCGLGPRKGQALIKMLKQTNQRLENRT
QLVTSCHMGPKVFINCAGFIKIDTNSLGDSTEAYVEVLDGSRVHPETYEWARKMAVDALE
YDDEDANPAGALEEILESPERLKDLDLDAFAEELERQGFGNKCVTLYDIRAELNCRYKDL
RVPYQSLSAERLFDILTKETPETFYVGKLVLATVIGISHRKPQGDQLDQANPVRNDETGL
WQCPFCLKNDFPELSEVWNHFDAGACPGKATGVRLRLDNGISGYIHIKNLSDRHVANPEE
RVNIGQIIHCRIIKIEVERFSVECTSKSSDLADKNHEWRPQRDPFYDTEAEQRDAKVEED
AKKAKQRQTYVKRVIVHPSFHNISFAEAEKLMQTMKQGEAIVRPSSKGADHLTVTWKVTD
EIYQHIDVREEGKENAFSLGQSLWIGNEEFEDLDEIIARHVNPMAAYASELLDFKYYKPA
VEGIKDKAEEILKEQKKENPGGIPYIISAAKNYPGKFLLSYLPRTRCRHEYVTVSPEGFR
FRGQMFGRVSDLFRWFKEHFRDPVPGQSTPSTPRGAMTSRTPYHTTPGAVSGMNQEAIQR
VAQNLPHHMLHSLSQVANQTPHHYPPHTPGTANAAGYGGVHTYPNTPYTPSGQTPFMTPY
QTPHHTPHHHGQPTPRYGQQTPNHQQGPFIHPPPPSGITSTGHHRSTPSHRPTPPMSTPG
DPMDWKKAAEAWARLKSGPRVSTSTPRYEESRRTPRNYEESVGRTTPRNRTSNRTPSYKS
PRGTPHTNSSPRSMSLSGDGTPLYDES
NT seq
5304 nt
NT seq
+upstream
nt +downstream
nt
atggctgattttttacattcagaagcagaagaaagcgaggaggagaaggaattagacgat
aatgagaaaaagaaactgaagaaaataaaagctatggaagaaagtgatgaagaagaagag
gaagatgatgaggatcgtttacgggaggaacttaaggatctcattgacgacaaccctata
gaagaaagtgagggagatgatagtgatgcttctggaatatctcaaaaacgtaaaaaaagt
gatgatgaggactttgatgatcgtttagaagatgaagattatgacttgatagaagaaaat
ttgggagtcaaagttgaaagaaaacgttttaaacgcctccgaaggatacaagatgaggaa
tcagaggaggaacaggaaaaggaggcagacgatgatagagatgctattgcaaacgaactt
ttcgaaggttctggcgatgaagatgaaaggcggagcgaacgtagtcacagacctgaagtc
gacacatttgacgaggaaggaagtgaaggagaatacacagacgctgatgattttattgtt
gacgatgatggtagaccaattgccgagaaacgcaaaaagaaaaagccaattttttctgat
gcagctttgcaagaagcacaagacatttttggtgttgattttgattatgatgaatttggt
aaatacggcgaagaggactatgaggaggaagaagaggaagaagaggaagaagaagaagat
gaatacatggacgatgaagacgccgagagaccgcgaaggccgaaaaaacagttgaaaaag
aaaactacgagaaaaagtattttcgaaatttacgaaccaagcgaacttaaacgcggtcat
tttaccgatatggataatgaaatacggaacacagatataccggagagaatgcaacttcgt
actgttcctgttacaccagttgcagagggttctgatgaactagacttagaggcagagtgg
atctataaacaggcgttctgtcgaccaactatttcaattcaagatgcacacctaaacgct
gaggctaaagaaagagctcggaaagggcctcaaacgatcggtaaaattaaaaaagcttta
gactttatgcgaaatcaacaattcgaagtacctttcatatcgttttatagaaaggaatat
gtcctaccggaactaaacattaacgatctctggaaagtgtacaaatttgacgccaagtgg
tgtcaacttcgtcagagaaaagaaaatttattaaaattatttgataaaatgcgaaattat
cagttagatgaaattatgaaaaatcctgatgcaccattaccagataacgtacgattgatt
aaagatgacgacatagaacgattgaaaaatgtgcaaaccagcgaggaactaaatgatgtt
tatcaccacttcatgttatattatagtcatgagataccagcaatgcaggaagctgctcgt
cagaaggagaaagaagcacggaaagaagcaaagattcaaaaacgaaaacaacaaattgcg
gatgctgaggaaaacggagaagatcctctgccggaagaggaggcggacgtagaggaagaa
gaggaaacagatgaaacattaaaacaggctgttcggactggtccatattctatttgcagg
cgggccggccttgataacctcgcaaaaaagttcggtctcactcccgaacattttgccgaa
aatttacgagacaattatcagcgacacgaagtagatcaggagccaacggaacctttaacc
attgctaatgaatactgtagtcaaatacttagtagttcggaagaagtactaaaagctgct
caattaatggtagctattcaattagcacgtgaacctttggtaaggaagtgtgtccgagaa
atgtacatggaaagagcaaagatatctgtaaaacctacaaaaaaaggaatcaaagagatc
gacgaaaaccatccagtttatgggatgaaatatttgaaggataagccagtgcgagatctg
gttggagatcagttcctaaatttggttatagccgaagaagataaattaattacgataaca
ttgagtgatagtatcgaagggaatactagtaacaactacgttgacgaaatgaaacaactt
tactaccgagacgagtttagtaaaaatgtccaggattggaacgcattgagagttgggagt
gttgaaatggcacttacacgtattgttttaccgagtctaaagaaagagctaaaagcaaat
cttattgcagaagctaaagaatgcgtaatgagagcatgtggtcgtaaaatgtacaattgg
attaaagttgctccttatacctgtgaatttccagaggaagaagatgaggaatgggatact
agtaaaggacttcgggtaatgggtttagcttatgtcccagaatactctcaagccgcattc
acttgtctaatcgcaccggatggggaatgtacagattatttgagattgccacacataatg
aaacgaaagaatagttaccgagaggacgagaaaaccatgaaagaagccgacttgttagca
attcgaaattttatagcaacaaaaaagccgcatgttgtagttataggtggtgaatcaaga
gaggcaatgatgatcgcggctgatattaaagaatgtatcgcgaacctagtagaagaagaa
caattcccaaacattaagatagaaatttgtgacaatgaattggctaaaatttactcgaac
agtaataaaggtgtatccgaatttcgggattatccggaattattgcgacaggctatctca
ttgggcagaagaatgcaagatcccttggtggaattttctcaattatgcaccgctgacgaa
gaaattttatgtttaaagtatcacaacttgcaagatcaattgccgaaagacgaacttttg
gataatttatatttagaattcgtgaatcgtgtaaacgaagttggtgttgatgtgaataag
gcggtacaacaagcttattgcgggaatttagttcaatttgtgtgtggtttggggccgaga
aaaggacaggcattgatcaaaatgttgaaacaaaccaatcaaaggttggaaaatagaact
cagcttgtaacttcttgtcacatgggacctaaggtttttattaactgtgcgggttttatc
aagatagatacaaacagtttaggagacagcaccgaagcatatgtcgaagtccttgatggg
tctcgagtacatcccgaaacgtatgaatgggcgagaaaaatggcagtcgacgctttagaa
tacgacgacgaagatgctaatccagctggagcactggaagagattctcgaatctcctgaa
agactgaaagatcttgatttggacgcgttcgcggaagaacttgaaagacaaggttttggc
aataaatgtgtcactttatatgatatcagagcagaattaaattgcagatataaagattta
cgtgtaccatatcagtcactgagcgcagaaaggttgttcgatattctaacgaaggaaacc
ccggaaacattttacgtagggaaattagtcttggccacagtaatagggataagccacaga
aaaccgcaaggtgatcaattggatcaagccaatcccgtaagaaatgacgaaactggattg
tggcaatgtccattctgtttgaaaaatgattttccggaattatccgaagtatggaatcat
tttgacgccggagcttgccccggcaaagctactggcgtgagattaagattagataatgga
atatctggttatattcatataaaaaatttatctgacagacacgttgcgaatcctgaagag
agagtaaacataggacaaataatacattgtcggataataaagattgaagtggagcgattc
agcgtcgaatgtacaagtaaaagtagcgacctcgcggataaaaatcacgaatggagacca
caaagagatccgttttatgacacagaagcagaacaaagagatgcgaaagtcgaagaagat
gccaagaaagcgaagcaacggcagacatatgtgaaacgcgtaatcgtgcatccttctttt
cacaacatcagttttgcagaagctgaaaaattaatgcagactatgaagcaaggggaagca
atagttagaccgagcagtaaaggtgctgatcatttaactgtcacatggaaagttactgat
gagatttatcagcatatcgatgttagagaggagggaaaagaaaatgccttttctctcggt
caaagcttgtggattggaaacgaagaattcgaggatttggatgaaattattgcgagacat
gttaatcctatggctgcatatgcttcggaattattggactttaaatattataaaccagct
gtagaaggcattaaggataaagcggaagagatattaaaagaacaaaagaaggaaaatcct
ggaggaattccgtatataatatctgctgcaaagaactatcctggaaagtttttgctatct
tatcttccgcgaactcgatgtcgtcacgaatatgtaacagtatcaccagaaggatttaga
ttcagagggcaaatgtttggtagagtgagcgacttgttccgatggttcaaagaacacttt
cgtgatccggtacctggacaatctactcctagtactccacgtggagcaatgacatctaga
acaccttatcatacaacgccaggagcagtgagtggaatgaatcaagaagccatacaaaga
gtggcgcaaaatcttccgcatcatatgttacattctttatcgcaagtggcgaatcagact
cctcatcattatccaccacacacaccaggaactgcgaatgccgctggttatggtggagtt
catacttatcctaatactccatacacaccttcgggacaaacaccttttatgacaccatat
caaacgccacatcatactccacatcatcatggtcaaccaactccaagatatgggcaacaa
acacctaatcatcagcaaggtcctttcattcatccacctccaccttcagggataacttct
acaggacatcacagatcaacaccatcgcatagacctacgcctccaatgtcaacaccaggc
gatcctatggattggaaaaaagcagcggaagcatgggcacgattaaaaagtggaccacgt
gtgtctacctctactccaagatatgaagaatctaggagaactccacgaaattacgaagaa
tcggttggaagaacaacgccgcgaaatagaacttcgaatcggacaccttcttataaatct
cctcgaggtacaccacacactaattcaagtcctcgaagtatgtctcttagtggagatggt
actcctttatatgatgaaagttaa
DBGET
integrated database retrieval system
