Bombus impatiens (common eastern bumble bee): 100746451
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Entry
100746451 CDS
T04362
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
bim
Bombus impatiens (common eastern bumble bee)
Pathway
bim03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bim00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100746451
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bim03041
]
100746451
Enzymes [BR:
bim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100746451
Spliceosome [BR:
bim03041
]
Complex A
U2 snRNP components
U2 related factors
100746451
Complex B
100746451
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
ResIII
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
100746451
NCBI-ProteinID:
XP_003488552
UniProt:
A0A6P3DQ90
LinkDB
All DBs
Position
Unknown
AA seq
1030 aa
AA seq
DB search
MVRSSDKDRHHRRRSRSRSRSRSATPEKKRRRSRSRDRDRERDKGRHRERRSRSRDRDRD
RRDRSDRDRDRDRKRGDSKEKRLTGSKSSRSGKDRSNRSRSRERKEKEKGDSDELPFDHT
KLDKEEEQKRLELEMQKRRERIERWRAERKKKELEATKKDGKASILANLQLPMKKWSLED
DSDEETPVVQNSNKECKEDGETKEQVEQVKEEAKCDEEEVDPLDAFMAEVQEEVRKVNKL
DSKGGKNANNGTGTGGTQSGGVVIVTGVAKKKVQKQKGELIEQNQDGLEYSSEEEGENLH
ETAAGIANKQKRELAKVDHATTEYQPFRKSFYVEVPEIARMTSEEVEAYKEELEGIRVKG
KGCPKPIKSWAQCGVTKKELEVLKKLGYEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTL
AFLLPMFRHILDQPPLADGDGPIALIMTPTRELCMQIGRDSKKFTKSLGLSHVCVYGGTG
ISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVM
RIMENVRPDRQTVLFSATFPRQMEALARRILTRPVEVQVGGRSIVCKDVEQHVVVLEEDQ
KFYKLLEILGHYQDKGSAIIFVDKQENADTLLKDLMKASYSCMSLHGGIDQCDRDSTILD
FKAGRTKLLVATSVAARGLDVKHLVLVVNYDCPNHYEDYVHRCGRTGRAGNKGYAYTFIT
SEQERYAGDILRAHELAGVPVPEPLRQLWEGYKARQAADGKKVHTGGGFSGKGFKFDESE
AALANEKKKFQKAALGLQDSDDEDIENDIDQQIESMLAPKRTVREIARPSATNIAVPGQP
VASATDKLELARRLASKINIAKNLGAEAKGATQQAAEAILKGAGPTNLITAKTVAEQLAA
KLNTKLNYQPREEDLVESDAEAGEQTFRKYEEELEINDFPQQARWRVTSKEALAQISEYS
EAGLTVRGTYIAPGKAPPEGERKLYLAIESTSELAVSKAKAEVSRLIKEELIKLQASGAH
TASRGRYKVL
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atggttcgaagtagcgacaaggacagacatcacagaaggcgatctagatcgcgatccaga
tcgcgatccgccacaccggagaagaaacgacggcgatctaggagtcgcgatagggataga
gaacgagataaaggtcggcacagggaaagaaggagccgttccagagaccgtgacagagat
agaagagatcgctccgatagagacagagaccgcgacaggaaacgcggcgacagtaaagaa
aagcgtcttacaggctcaaagtcgtcgcgttcaggcaaagatcggtcgaatagatcgaga
tcgagagagagaaaggagaaagagaagggtgacagcgatgaactgccgttcgatcataca
aagttggacaaggaggaagagcagaaaagattggaattggaaatgcaaaagaggagagaa
agaatagagaggtggcgcgccgaaaggaaaaagaaagagttggaggcaacgaagaaagac
ggtaaggcatccattttagcaaacctacagttgcctatgaaaaagtggtccctcgaggat
gacagtgatgaagaaacgcctgttgtccaaaatagcaacaaggaatgcaaagaagacgga
gaaacgaaagagcaagtggaacaagttaaggaagaagctaaatgcgacgaagaagaagtc
gatcccctcgatgcctttatggcagaagttcaagaggaagttcgtaaggtgaacaaactc
gatagcaaaggtggaaagaacgcgaataacggcacagggacgggaggtactcagagcggt
ggcgttgttatcgtcaccggtgtagccaaaaagaaagtgcagaagcaaaagggtgaactg
atcgaacagaatcaagatggtcttgaatattccagcgaagaggaaggcgaaaatcttcac
gaaacagctgctggcatcgcgaacaagcagaagcgagaattagccaaagttgatcatgca
acgaccgagtatcaaccgttcagaaaatcattctacgtcgaagtacctgagatcgcgaga
atgacgtcggaagaagtggaagcgtacaaagaggagttagaaggtattcgcgtgaaaggc
aaaggttgtccgaagcccattaaatcatgggcacagtgtggcgtcacgaagaaagagttg
gaggtgttgaagaaactcggttacgagaaaccaacccctattcaatgtcaagccattccg
gcgatcatgtctggccgtgatttgataggtatagcaaagacaggcagtgggaaaacgtta
gccttcttgctaccgatgttcaggcatattctcgatcagcctccattggcagacggtgat
ggtccgatcgcgttaatcatgacgccaactagagaattatgcatgcaaatcggtagagac
tcgaaaaagttcacaaagtctctggggctgtcccatgtctgcgtttacggtggaaccggt
atatcggaacagatagccgagctaaagagaggcgccgaaataatcgtttgtacgccaggt
agaatgatcgatatgctagccgctaacagcggaagggtgacaaacctgcgcagagtaacg
tacgtggttcttgacgaagcggatagaatgttcgacatgggtttcgagccccaggtcatg
cgtattatggaaaacgttcgaccagatcggcaaactgtactgttcagcgcgacattccct
cgacaaatggaagcattagcaagaagaattctaaccagacctgtagaggttcaggtcgga
ggacgatcgatcgtttgtaaggatgtcgaacagcacgtggtagttctcgaagaagatcaa
aagttttacaagttacttgaaatccttggtcactatcaagataaaggttccgctataata
ttcgtcgacaagcaggagaacgcagacaccttactcaaggatctgatgaaagcctcttat
tcctgtatgtcgcttcacggaggtatcgaccagtgcgatagagactcgactatattggat
ttcaaggctggcaggacaaagttattagtcgcaacgtcagtggcggccagaggtctggac
gtgaagcatctggtactcgtggtgaattacgactgcccgaatcactacgaggattacgtg
cacagatgtggaagaacaggaagagctgggaacaaggggtacgcgtacacttttatcaca
tcggagcaagaacgttacgcgggtgatattttacgtgctcacgaattagcgggtgtcccc
gttccggaaccgttgcgtcaactatgggagggatacaaagctcgacaagcggcagacggg
aagaaggttcacacaggaggcggtttcagtggtaaaggattcaaatttgacgaatcggag
gcagcgttggccaacgaaaagaagaagttccaaaaggcagctctgggattacaagattcc
gatgacgaggacatagagaacgacatcgatcaacaaatagagagcatgcttgctccaaag
aggacggttcgtgaaatcgccagaccttccgccaccaatatcgcggttcctggtcagcct
gtagctagcgcgactgacaagttggagttggctaggcgactggcgtctaagatcaacatt
gcgaagaatctaggtgccgaggcgaagggcgcaacacagcaagcagccgaagctatactt
aaaggcgctggccccaccaatcttattacagcgaaaacggttgccgaacagctggctgcc
aagttgaacacgaaattgaattaccaacctcgcgaagaggatctggtggaaagcgacgca
gaggctggcgaacaaacgttccgcaaatacgaggaagaattggagatcaacgacttcccg
cagcaggctaggtggcgagttacaagcaaggaagctcttgctcagatctcggagtactcc
gaagcaggtctcacggttagagggacttacatcgcacccggtaaagcaccaccggaagga
gagaggaagttgtatctcgccatcgaatctaccagcgagctagcagttagcaaggccaaa
gcagaagtttcgcgtttgatcaaggaagagctgatcaagttacaggcgtccggagcgcat
accgcatctcgcggtcgttacaaggttttgtaa
DBGET
integrated database retrieval system
