Bombus impatiens (common eastern bumble bee): 100746647
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Entry
100746647 CDS
T04362
Name
(RefSeq) transcription elongation factor SPT6 isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
bim
Bombus impatiens (common eastern bumble bee)
Brite
KEGG Orthology (KO) [BR:
bim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bim03021
]
100746647
03036 Chromosome and associated proteins [BR:
bim03036
]
100746647
Transcription machinery [BR:
bim03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
100746647
Chromosome and associated proteins [BR:
bim03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
100746647
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
S1
SH2
HHH_3
HHH_9
Spt6_S1
S1_RRP5
OB_RRP5_4th
Tex_YqgF
Tex_N
CTD
m_DGTX_Dc1a_b_c
Motif
Other DBs
NCBI-GeneID:
100746647
NCBI-ProteinID:
XP_024221379
UniProt:
A0A6P6F8W6
LinkDB
All DBs
Position
Unknown
AA seq
1738 aa
AA seq
DB search
MADYLDIEAQESEEEDQLDVKEKKKLKKLKEMEDSEDEDDEEDEGEVPGLIDDNSIDDDD
DGEDSDNSRKRKKSDDEDFDDRLEDEDYDLLEENLGVKVERKRRFKRLRRIQDEESEVEE
EREINDERDAIANELFQGSGDEDEERSEVSHRGEAEGYNEEESDDEDDFIVDGDGIPITE
KRKKKRPVFSDAALQEAQDIFGIDFDYDEFGKYGGDAFEEEEEDEYIHDEIENRPRPSKK
HLKRKSTRKSIFEVYEPSELIRGHFTDVDNEIRTTDIPERMQLRAVPIIPTVEGSDELDL
EAKWIYKQAFCQPTISIQDSHLNEEAKERAKKGPQTIGKIKKALDFMRNQNFEVPFIAFY
RKEYVLPELNINDLWKIYKFDVKWCYLKQRKENLLKLFEKMRDFQLDEIMKNPDAPLPDN
IRVIKDDDIERLKNAHTFEELNDIYRHFMLYYNQDVSSMQEIARKKEKQAQRKAKLEKRK
QQLAEAEENGEDLSEIPDAEDEEEEIDESLKQPVRKGPYYICGKAGLDGFTKRFGLSPEH
FAENLRDNYQRHEVDQDPIEPAIVANEFCSAIFTTSDEVVKAAQLMVAIQLAHEPLVRKC
VREMYMERAKVSVKPTKKGIKEIDEGHAIYGLKYLKNKPVRDLVGDQFLKLIIAEEDKLI
TLYFSDMIEGNTSNNYIDEIKQLYYRDEFSKSVQDWNALRTGSVEVALNRIIIPQLKKEL
RSNLLLEAKECVMKACCRKMYNWIKIAPYACEFPDEDDEDWNTSKGIRVMGLAYVPDPSQ
AAFTCIISPEGECTDYLRLPHLLKRKNSFRENEKILKEVDLLGIKNFIATKKPHVVVVSG
ESREALMIVSDIKECIANLAEEEKFPTVPVEICDNELAKVYANSNRGISEFRDYPEVLRQ
AISLARKIQDPLLEFSQLCTIDEEILCLKYHPLQDQLPKDDLIENLYLEFINRINEVGVD
LNKAVQQPYTANLVQFVCGLGPRKGQALIKILKQSNQRLENRTQLITACHMGPKVFVNCA
GFIKIDTNSLGDSTEAYVEVLDGSRVHPETYEWARKMAVDALEYDDEDANPAGALEEILE
SPERLKDLDLDAFAEELERQGFGNKCITLYDIRAELNCRYKDLRVPYQSLNTEKLFDILT
KETPETFYVGKLVLATVVGISHRRPQGDQLDQANPVRNDETGLWQCPFCLKNDFPELSEV
WNHFDAGACPGKATGIRLRLDNGISGYIHVKNLSDKHVANPEERVRVGQVIHCRIIKIEV
ERFSVECTSKTSDLIDKNHEWRPQRDVYYEAEAEEKDTKTEEDAKKLQQRQTYVKRVIIH
PSFHNISFAEAEKLMLTVKQGEAIIRPSSKGSDHLTVTWKVTENIYQHIDIREEGKENTF
SLGRSLWIGNEEFEDLDEIIARHINPMAAYTSELLDFKYYKTSVEGIKDKAEEILKEQKK
QNPGGIPYIVSAAKNYPGKFLLSYLPRIRCRHEYVTVIPDGFRFRGQMFSRINDLFRWFK
EHFRDPIPGQATPGTPHGTMTSRTPYNGTPGVNGVNPDTIQRVAQNMPHHLLHSLSKVAN
QTPHHYPPYTPGAASVNNYGMYGSTPYTPSGQTPFMTPYHTPHHTPHHPQTPNHSQGPFL
QPIPPAMNSNSHRTARSHRSVSSTSDATNWTKAAEAWARSKQSSNSFSNFSNTTPRYNES
RKTPRNQEAQNGRATPRNRTPSARTPSYKSPRETPFTNSSPRSMSLSGDGTPLYDESW
NT seq
5217 nt
NT seq
+upstream
nt +downstream
nt
atggcagattatttggacattgaagcacaagaaagtgaggaggaggaccaacttgatgtt
aaagaaaagaaaaaacttaaaaaattaaaagagatggaggacagtgaggatgaagatgat
gaagaagatgaaggggaagttcctggacttattgatgataattctatcgatgatgatgat
gatggcgaggatagtgataattctagaaaacgtaaaaaaagtgatgatgaagattttgat
gatcgtttagaagatgaagattatgacctacttgaagaaaatttaggagttaaagttgaa
aggaaacgtcgttttaagcgtttacgtagaatacaagatgaagaatcagaagtggaagaa
gaaagagaaataaatgatgaaagagatgctattgccaacgaattgtttcaaggttctgga
gacgaagatgaagaaagaagtgaagttagccatagaggtgaagcggaagggtataatgag
gaagaaagtgatgatgaagacgattttattgtagatggtgatggaatacccataactgaa
aagaggaaaaagaaaagacctgtattttcagatgctgcattgcaagaagcccaagatatt
tttggcattgattttgattatgacgaatttggaaaatatggaggggatgcgtttgaagag
gaagaggaggatgaatatattcatgacgagatagaaaaccgcccaaggccatcaaaaaaa
catcttaagagaaagagtacaaggaaaagtatttttgaagtatatgaacccagtgaactt
atacgcggacacttcaccgatgtagacaatgagattcgtactacagacattcctgaacgt
atgcaacttcgcgctgttcccattatacctacagtggaaggttcggatgaattagatctt
gaagccaaatggatatataaacaggcattctgccaaccaacaatttcaatacaagattct
catctaaatgaagaagccaaagaaagagctaaaaagggtccgcaaacaatcggcaaaatt
aagaaagccttagattttatgcgtaatcagaactttgaagttccgtttattgcattttat
agaaaagaatatgtgttgccagagttaaacatcaacgatttgtggaaaatttataagttt
gacgtaaaatggtgctatttgaaacaaagaaaagaaaatttattgaaactctttgagaag
atgagggattttcaattagatgagattatgaaaaatcctgatgctccattacccgacaac
atacgagttattaaggacgatgatattgaacgacttaaaaatgctcatacttttgaagaa
ttaaatgatatttatcgacattttatgttgtattataatcaggatgtgtcatccatgcaa
gaaattgcacgtaagaaggaaaaacaagcacaaaggaaagctaaattggaaaaaagaaag
caacaacttgcagaagctgaagaaaatggagaagatctatctgaaattcctgatgcagag
gatgaagaagaagaaatagacgaatcattaaagcagccggttagaaaaggtccttactat
atttgcggaaaagctggattagatggatttactaaaagatttggtctctcacccgagcat
tttgctgaaaatcttcgagacaattatcaacgtcatgaagtagatcaagatccaatagaa
cctgcaatagtagcaaatgaattttgttctgcaatatttacgacaagtgacgaagtagtt
aaagctgcacaattaatggttgcgattcagttggcgcacgaaccattagttcgtaaatgt
gttagagaaatgtatatggaaagagcaaaagtatccgtaaaaccaactaaaaaaggaata
aaggagatagatgaagggcatgccatttatggattaaaatatcttaaaaataagcctgta
cgggatcttgttggtgatcaattcttaaaactaattatagcagaagaagataaattaatt
acactttactttagtgacatgatagaaggaaatactagcaataattatatcgatgaaata
aagcaactatattatagggacgaatttagtaaaagtgtccaagattggaatgcattaaga
actggtagtgttgaagtagctttaaatcggattattatacctcaattgaaaaaagaattg
agatccaatcttttgttagaagcaaaagaatgcgttatgaaagcgtgttgccgcaaaatg
tacaattggataaaaattgctccatatgcttgtgaatttcctgatgaagatgacgaagat
tggaatactagcaaaggaattcgtgtgatgggtttggcatatgtgcctgatccgtctcaa
gcagcctttacttgcataatttctccagaaggagaatgtactgattacctaagattaccg
catttattgaaacgtaaaaatagttttagggaaaatgaaaagatattgaaagaggtagac
ttactaggaatcaaaaattttattgccacaaagaaaccacatgttgtggtagtaagtggt
gaatctagagaagcattaatgatagtatctgatataaaagaatgcatagctaatctcgca
gaagaagaaaaatttcctacagtcccagtggaaatatgtgacaatgaacttgctaaagtt
tatgcaaatagtaacagaggtatatctgagttcagagattatccagaagtattaagacaa
gctatatctttagcaagaaaaatacaagatcctctattagaattctctcagttgtgtacc
atagatgaagaaattctgtgccttaaatatcatcctttgcaagatcaacttcctaaagat
gatcttatagaaaatttatatttggaatttataaatcgtataaatgaagtaggagtagat
ttaaataaagcagttcagcagccttatacagcgaacctagtacaatttgtgtgtggctta
ggacctagaaaaggacaggctctcattaagattttgaaacaatctaatcaaagactagaa
aatagaacacagcttataacagcatgtcatatgggacctaaagtgtttgttaattgtgct
ggttttattaaaattgatacaaatagtttaggagatagcacagaggcatatgtagaagta
ctagatggctcacgtgtacatccagagacatatgaatgggcaagaaaaatggcagtagat
gctttagagtatgatgatgaagatgcaaatcctgctggtgccctagaagaaattcttgaa
tcaccagaaagattaaaagatttagatttggatgcatttgcagaggagcttgaaagacag
ggttttggaaacaagtgcattactctttacgatataagagctgaactgaactgtagatac
aaagacctccgtgtaccttaccaatctctaaatactgaaaaattatttgatattttgact
aaagaaactccggaaactttctatgtcggtaaattagttttggcaacagttgttggtata
agtcatagaagacctcaaggagatcaattagatcaagcgaatcctgttcgaaatgatgaa
accggattatggcaatgcccattttgcttgaaaaacgattttccagaattgtccgaggta
tggaatcattttgatgccggtgcatgtccgggaaaagcaactggaattcgtttaaggttg
gataatggaatatctggatatattcacgtaaaaaatctgtctgataaacatgtcgctaat
ccagaggaaagagtacgtgtcggacaagtaattcattgtcgcataattaagatcgaagta
gaacgatttagtgtcgaatgtactagcaagacgagtgatcttattgataaaaatcacgaa
tggagacctcagcgagacgtttattatgaagcagaggcagaagaaaaagatacaaaaaca
gaggaggatgctaaaaaattgcaacaacgacaaacttatgtaaaacgtgttataattcat
cctagtttccataatataagttttgcagaagctgaaaagttaatgttaactgtgaagcaa
ggggaagcaataatacgacctagcagtaagggatccgatcatttgaccgtaacatggaaa
gtcacagaaaatatttatcaacatattgatataagggaagaaggcaaagaaaatacattt
tctttgggtcgcagtttatggattggcaatgaagaattcgaagatttggatgaaattatc
gctagacatattaatccgatggctgcttatacttcggaacttttagattttaaatattac
aaaacaagtgtagaaggcattaaagataaagcagaagaaattttgaaggaacagaagaag
caaaatcctggagggataccatatattgtgtctgcagctaaaaattatcccggaaaattt
ttactttcgtatttaccacgaattcgttgccgtcatgaatatgttactgtaatacctgat
ggatttcgatttagaggtcaaatgtttagtagaataaatgacttgttccgctggttcaaa
gaacactttagagatcctataccaggacaagctacacctggtactccacatggaactatg
acttccagaacaccatacaatggtactccaggagtgaatggagtgaatccagatacaata
cagagggtagcacagaatatgccacaccacttgttacattcactctcaaaagtagcaaat
caaactccacatcattatccaccatacactccaggagctgctagtgttaataactatgga
atgtatggaagtacgccttatacaccttccggccaaactccgtttatgaccccctaccat
acaccacaccacacgccccatcatccacaaacacctaatcactctcaaggaccattctta
caaccaattcctccagcaatgaattcaaattcacatagaactgcaagatcacatagatct
gtctctagtacttctgatgcaacgaattggacaaaagcggcggaagcatgggctcgatca
aagcaatcttcgaattcattttctaattttagtaatactactccaagatacaatgaatct
agaaaaacaccacgaaatcaagaagctcaaaatgggagagcaactccgcgcaatagaacc
ccatctgctcgtactccgtcttataaatctcctagagaaactccatttacaaattctagt
ccccggagtatgtctctaagtggagatggtactcccctatatgatgaaagttggtaa
DBGET
integrated database retrieval system
