Entry |
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Name |
(RefSeq) probable ATP-dependent RNA helicase kurz isoform X1
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KO |
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Organism |
bim Bombus impatiens (common eastern bumble bee)
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Brite |
KEGG Orthology (KO) [BR:bim00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:bim03009]
100746733
Enzymes [BR:bim01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100746733
Ribosome biogenesis [BR:bim03009]
Eukaryotic type
90S particles
Helicases
100746733
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
Unknown
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AA seq |
1195 aa
MGRKKHNWKARNIAEVEIDNSATKKIPIDIKYREDNYDNCNALVLPNEKRRTKSKVKKVT
TTRLLSKKRRKQLEKVVEKKKKKLRRTELLEELGKVQAPQEELKQYVSLTSVQTKGLKRH
FREMELPVKEHMIKSNNENEDNMSEVPVNAIKGSKKRRMAILKEQKVQDAVSDPNVIGFD
EPSNSESESNSEDNEDREEKDAAETSEDNENIPNKEDNILENNITKSTVGEQEKSIENQT
TISKELLKPQQPIERTPATFVVLERKPEIQAARLKLPVVAEEQAIIEAINENPVVIITGE
TGSGKTTQVPQFLYEAGYAQEKVIGITEPRRVAAISMSKRVAEEMNLTEEEVSYLIRFEG
NVTSETKVKFMTDGVLLKEIQSDFLLTKYSIIILDEAHERSVYTDILIGLLSRIVPLRNK
RKNPLKLVIMSATLRVEEFVENSKLFKTKPPVLTVESRQFPVTIHFNKRTSINYVSDALK
KAIKIHTRLPDGGILIFLTGQREVNYVVCKLRRAFSMKNKKEIANKMKEPQKTNDSSKKE
DDIKNNSDNEDKSDNSDHDDDDDFRCKEAIRYNKLRQKKKVQLPNINLDDYSVIPTDDTH
EDLIGAEDDEEIQLDEDEDEDDDVIDLKTCADAQPLWVLPLYSLLQSDKQARVFEPPPEG
HRLCVVSTNVAETSLTIPNIKYVVDCGRCKTRMYDKVTGVSTYRVCYTSKASANQRAGRA
GRTGPGHCYRLYSSAVFNDQFEQFSQSEIQRKPVDDLLLQMKVMNIDKVVNFPFPTPPDT
VQLQIAEKRLMILGALQQQTSGKEGSYSAKVTPLGRSIAAFPVAPRYGKMLALSHQYDLL
QYTVCMVAALSVQEVLMETLNMDGDSRNKLLQMRRFWAGTGNSLLLGDPMVLIRAVGSAE
YAGTKGRLLPFCEEHGLRHKAIVEIRKLRQQLTNEINLNIEDLNLTINPQMKPPADIEAK
LLRQIVLAGMADQVARKVMPDEVNEDQDKAKWKYAYKTTDMEDPVFIHSSCVLRKICPEW
VVYQEIYETNKMYMRGVTSIEPEWLPKFAPSLCQLGEPLTDPPPRYDPETGKVMCSMAGT
FGRAGWKLPVMDVEYPLSVDGVKWFACFLLEGKVCPKLKQFVPSLLSTPQSINKTWAKLI
PRTQEMTQLLLSRGIMSKGQLLEAWKVDKNFLLSAYQKWLPESAHGHVVLIWPPV |
NT seq |
3588 nt +upstreamnt +downstreamnt
atggggaggaaaaaacataattggaaggcgagaaatatcgcagaagttgaaattgacaat
tctgcgactaaaaagattcctatagatataaaatatcgtgaagataattacgataactgt
aacgcgctagtgctcccaaatgaaaaaagaagaacaaagagcaaagttaaaaaagtcact
actacacggttattatccaagaaacgtagaaaacaattagagaaagttgtagaaaagaag
aagaaaaagttacgtaggactgaacttttagaggaattggggaaagttcaagcaccgcag
gaagaactgaagcaatatgtatctttgactagtgtacaaactaaaggactgaaacgtcat
tttagagaaatggaattacctgttaaggaacatatgatcaaatcaaataatgaaaatgag
gacaacatgtcagaagtacctgtaaatgctattaaaggtagcaagaagagaaggatggca
attttgaaagaacaaaaagtacaggatgctgtttcagatccaaacgtcattggatttgat
gaacctagcaatagtgaatctgaatctaattctgaggataatgaagacagagaggagaaa
gatgcagcagaaacttcagaagataatgaaaatattccaaacaaagaagataatattcta
gagaataatataacaaaaagtactgtgggagaacaggaaaagtcaattgaaaaccaaacc
actataagtaaagaattgttaaaaccacagcagccaatagaaagaacacctgccacgttt
gtagtactggaaaggaaaccggaaatccaagcagctagattaaagttgccagtggtagca
gaagaacaagctataatagaagcaattaatgaaaatcctgtcgtaataatcactggcgaa
acgggaagtggtaaaacaactcaggtaccccaatttctctatgaagctggctatgctcaa
gaaaaggtaattggaataacagaacctagaagagtagcagctatatctatgagcaaacgt
gttgccgaagagatgaatctcactgaagaagaagtttcttatttgattcgttttgagggg
aatgttacatcagagacaaaagtcaaatttatgactgatggcgtattattaaaagaaata
cagagtgattttttactgacaaaatattcgataatcatcctcgacgaagcgcacgaacgt
agtgtgtatactgatattctgataggcttgctatcacgaattgtaccacttcgaaataaa
aggaagaatcctctaaagctcgtaattatgtcagccactttacgcgtagaggaatttgta
gaaaatagtaaattgttcaaaacgaaaccgcctgtattaacagtggaatcgagacagttt
cctgttacgatacattttaataaaaggacaagcatcaattacgtttctgatgctctaaag
aaagccataaaaatacatactcgccttcccgatggtggaatcttaatatttttaacaggg
caacgggaagtaaattatgtagtatgtaaattacgcagagctttttccatgaagaataaa
aaggaaattgcaaacaagatgaaagaaccacagaagactaatgattcttcaaagaaagag
gatgatataaaaaacaacagtgataatgaggacaagagtgacaatagtgatcatgatgat
gatgatgattttcgttgcaaggaagctattcgttacaacaaattacgacaaaagaagaaa
gttcaattaccaaatattaatctggatgattactctgtgattcctaccgatgatactcac
gaagatttaattggcgcggaagatgacgaagaaatacaattagacgaggatgaagatgaa
gatgacgacgtaattgacttaaaaacttgtgcagatgcacaaccattgtgggttttacca
ttatattctctgcttcagagtgacaaacaagcaagggtattcgagccacccccagaagga
caccgtttatgtgtagtatcaacaaacgtagcagaaacttctttaactatacctaacata
aagtatgtagtagactgtggacgttgtaaaacgagaatgtacgataaagtaactggagta
agcacatacagagtctgctatactagcaaggcatccgctaatcaacgagcagggagagct
ggtagaactggtcctggacattgttacaggttgtactcttcagcagtgttcaatgatcag
tttgaacagtttagtcaatcagagattcaaaggaaacctgtggatgatttactgttacag
atgaaagtcatgaatattgataaggttgttaattttccattcccaactccaccagatact
gtacaattacaaattgctgaaaaaagattgatgatacttggagctttacaacaacaaact
tccggcaaagaaggttcctatagtgccaaagtcacgccactcggtcgcagtatcgctgca
tttccagttgctccccgttatggaaagatgttggctctctctcatcaatatgaccttctg
cagtatacagtgtgtatggtggctgcactttctgttcaagaagtattgatggaaacattg
aatatggacggtgattcccgaaataaattgttgcaaatgaggcgcttctgggctggcacc
ggaaatagcttacttcttggcgatccgatggttttaattagggctgtgggaagtgcagaa
tatgctggaactaaaggaagattacttcccttttgcgaagagcatggtttgcgacacaaa
gcaattgtagaaattcgaaagctccgacagcagctaacgaatgaaatcaatttgaatatt
gaggatttgaatctcactattaacccacagatgaaacctccagccgatatagaagccaaa
ttactcagacaaatagtccttgcaggaatggctgatcaagttgcaaggaaagtgatgcca
gatgaagttaatgaagatcaagacaaggctaagtggaaatatgcttacaaaaccacagat
atggaggatccagtattcatacattcctcatgtgttcttcgaaaaatctgccctgaatgg
gtagtttatcaagaaatatacgagacgaataaaatgtacatgcgcggtgttacaagtata
gaacccgaatggctacctaaatttgctccatctctatgtcagcttggagaacctttaact
gatccaccaccaaggtatgatccagaaactggaaaggtaatgtgcagtatggcaggaaca
tttggaagagcaggttggaagttaccagtaatggatgtggagtacccactatctgtagat
ggagttaaatggtttgcatgtttccttttagaaggaaaagtgtgtccaaaattgaaacaa
ttcgttccttcattgttatcgactccccaaagtattaacaagacatgggctaaattaata
ccacgaacacaggaaatgacgcagttattactgtcccgcggaattatgtcaaaaggacaa
ttactagaagcttggaaagtagataaaaatttccttctgtctgcttatcagaaatggtta
ccagaatcagctcatggacacgttgtgcttatttggccacctgtatga |